RNA–Protein interactions for RNA: ENST00000464471.1

GTF2I-205, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-205ENST00000464471 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
GTF2I-205ENST00000464471 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
GTF2I-205ENST00000464471 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
GTF2I-205ENST00000464471 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
GTF2I-205ENST00000464471 FOXD1Q16676 465 aa18.29■□□□□ 0.52
GTF2I-205ENST00000464471 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
GTF2I-205ENST00000464471 MSH5O43196 834 aa17.23■□□□□ 0.35
GTF2I-205ENST00000464471 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
GTF2I-205ENST00000464471 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
GTF2I-205ENST00000464471 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
GTF2I-205ENST00000464471 ADRA2BP18089 450 aa16.78■□□□□ 0.28
GTF2I-205ENST00000464471 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
GTF2I-205ENST00000464471 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
GTF2I-205ENST00000464471 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
GTF2I-205ENST00000464471 CACNB1Q02641 598 aaPredicted RBP14.94□□□□□ -0.02
GTF2I-205ENST00000464471 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
GTF2I-205ENST00000464471 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
GTF2I-205ENST00000464471 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
GTF2I-205ENST00000464471 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
GTF2I-205ENST00000464471 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
GTF2I-205ENST00000464471 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
GTF2I-205ENST00000464471 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
GTF2I-205ENST00000464471 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
GTF2I-205ENST00000464471 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
GTF2I-205ENST00000464471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
GTF2I-205ENST00000464471 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
GTF2I-205ENST00000464471 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
GTF2I-205ENST00000464471 DSG3P32926 999 aa13.65□□□□□ -0.22
GTF2I-205ENST00000464471 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
GTF2I-205ENST00000464471 CAPN15O75808 1086 aa13.6□□□□□ -0.23
GTF2I-205ENST00000464471 POTEHQ6S545 545 aa13.52□□□□□ -0.25
GTF2I-205ENST00000464471 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
GTF2I-205ENST00000464471 KCNA4P22459 653 aa13.44□□□□□ -0.26
GTF2I-205ENST00000464471 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
GTF2I-205ENST00000464471 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
GTF2I-205ENST00000464471 APLP2Q06481 763 aa13.31□□□□□ -0.28
GTF2I-205ENST00000464471 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
GTF2I-205ENST00000464471 ABCB7O75027 752 aa13.26□□□□□ -0.29
GTF2I-205ENST00000464471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
GTF2I-205ENST00000464471 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
GTF2I-205ENST00000464471 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-205ENST00000464471 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
GTF2I-205ENST00000464471 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
GTF2I-205ENST00000464471 POLA2Q14181 598 aa12.91□□□□□ -0.34
GTF2I-205ENST00000464471 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
GTF2I-205ENST00000464471 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
GTF2I-205ENST00000464471 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
GTF2I-205ENST00000464471 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
GTF2I-205ENST00000464471 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
GTF2I-205ENST00000464471 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
GTF2I-205ENST00000464471 REM2Q8IYK8 340 aaPredicted RBP12.54□□□□□ -0.4
GTF2I-205ENST00000464471 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
GTF2I-205ENST00000464471 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
GTF2I-205ENST00000464471 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
GTF2I-205ENST00000464471 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
GTF2I-205ENST00000464471 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
GTF2I-205ENST00000464471 ZBTB22O15209 634 aa12.37□□□□□ -0.43
GTF2I-205ENST00000464471 ABCC9O60706 1549 aa12.35□□□□□ -0.43
GTF2I-205ENST00000464471 HAX1O00165 279 aa12.31□□□□□ -0.44
GTF2I-205ENST00000464471 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
GTF2I-205ENST00000464471 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
GTF2I-205ENST00000464471 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
GTF2I-205ENST00000464471 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
GTF2I-205ENST00000464471 EVX2Q03828 476 aa12.18□□□□□ -0.46
GTF2I-205ENST00000464471 FBLN2P98095 1184 aa12.16□□□□□ -0.46
GTF2I-205ENST00000464471 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
GTF2I-205ENST00000464471 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
GTF2I-205ENST00000464471 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
GTF2I-205ENST00000464471 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
GTF2I-205ENST00000464471 CLEC11AQ9Y240 323 aa12.03□□□□□ -0.48
GTF2I-205ENST00000464471 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
GTF2I-205ENST00000464471 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
GTF2I-205ENST00000464471 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
GTF2I-205ENST00000464471 GABBR2O75899 941 aa11.88□□□□□ -0.51
GTF2I-205ENST00000464471 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
GTF2I-205ENST00000464471 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
GTF2I-205ENST00000464471 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
GTF2I-205ENST00000464471 LHX8Q68G74 356 aa11.75□□□□□ -0.53
GTF2I-205ENST00000464471 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
GTF2I-205ENST00000464471 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
GTF2I-205ENST00000464471 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
GTF2I-205ENST00000464471 CLCN6P51797 869 aa11.6□□□□□ -0.55
GTF2I-205ENST00000464471 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
GTF2I-205ENST00000464471 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
GTF2I-205ENST00000464471 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
GTF2I-205ENST00000464471 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
GTF2I-205ENST00000464471 DCBLD2Q96PD2 775 aa11.46□□□□□ -0.57
GTF2I-205ENST00000464471 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
GTF2I-205ENST00000464471 ZRANB1Q9UGI0 708 aa11.44□□□□□ -0.58
GTF2I-205ENST00000464471 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
GTF2I-205ENST00000464471 NACADO15069 1562 aa11.44□□□□□ -0.58
GTF2I-205ENST00000464471 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
GTF2I-205ENST00000464471 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
GTF2I-205ENST00000464471 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
GTF2I-205ENST00000464471 BICRAQ9NZM4 1560 aa11.27□□□□□ -0.61
GTF2I-205ENST00000464471 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
GTF2I-205ENST00000464471 OTUD5Q96G74 571 aa11.26□□□□□ -0.61
GTF2I-205ENST00000464471 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
GTF2I-205ENST00000464471 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
GTF2I-205ENST00000464471 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms