RNA–Protein interactions for RNA: ENST00000460750.5

KCNT1-203, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 1 (best)

Gene KCNT1, Length 4,738 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-203ENST00000460750 NISCHQ9Y2I1 1504 aa29.06■■■□□ 2.24
KCNT1-203ENST00000460750 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
KCNT1-203ENST00000460750 PELP1Q8IZL8 1130 aaKnown RBP27.19■■□□□ 1.94
KCNT1-203ENST00000460750 MYT1Q01538 1121 aa26.86■■□□□ 1.89
KCNT1-203ENST00000460750 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
KCNT1-203ENST00000460750 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.86
KCNT1-203ENST00000460750 PCGF6Q9BYE7 350 aa26.16■■□□□ 1.78
KCNT1-203ENST00000460750 CENPBP07199 599 aaPredicted RBP25.92■■□□□ 1.74
KCNT1-203ENST00000460750 HRCP23327 699 aa25.75■■□□□ 1.71
KCNT1-203ENST00000460750 EHMT2Q96KQ7 1210 aa25.72■■□□□ 1.71
KCNT1-203ENST00000460750 ZEB1P37275 1124 aaPredicted RBP25.68■■□□□ 1.7
KCNT1-203ENST00000460750 ERICH6Q7L0X2 663 aa25.36■■□□□ 1.65
KCNT1-203ENST00000460750 APLP2Q06481 763 aa25.36■■□□□ 1.65
KCNT1-203ENST00000460750 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
KCNT1-203ENST00000460750 PPARGC1BQ86YN6 1023 aaKnown RBP25.14■■□□□ 1.62
KCNT1-203ENST00000460750 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
KCNT1-203ENST00000460750 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
KCNT1-203ENST00000460750 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
KCNT1-203ENST00000460750 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
KCNT1-203ENST00000460750 TRIM26Q12899 539 aaPredicted RBP24.85■■□□□ 1.57
KCNT1-203ENST00000460750 NEFLP07196 543 aa24.69■■□□□ 1.54
KCNT1-203ENST00000460750 GTF3C3Q9Y5Q9 886 aa24.59■■□□□ 1.53
KCNT1-203ENST00000460750 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
KCNT1-203ENST00000460750 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
KCNT1-203ENST00000460750 UBTFP17480 764 aaKnown RBP24.49■■□□□ 1.51
KCNT1-203ENST00000460750 ABCC9O60706 1549 aa24.37■■□□□ 1.49
KCNT1-203ENST00000460750 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
KCNT1-203ENST00000460750 ACIN1Q9UKV3 1341 aaKnown RBP24.34■■□□□ 1.49
KCNT1-203ENST00000460750 ATP1B4Q9UN42 357 aaPredicted RBP24.3■■□□□ 1.48
KCNT1-203ENST00000460750 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
KCNT1-203ENST00000460750 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
KCNT1-203ENST00000460750 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
KCNT1-203ENST00000460750 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
KCNT1-203ENST00000460750 RTL5Q5HYW3 569 aaPredicted RBP23.98■■□□□ 1.43
KCNT1-203ENST00000460750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
KCNT1-203ENST00000460750 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
KCNT1-203ENST00000460750 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
KCNT1-203ENST00000460750 BCANQ96GW7 911 aa23.75■■□□□ 1.39
KCNT1-203ENST00000460750 DAXXQ9UER7 740 aaPredicted RBP23.73■■□□□ 1.39
KCNT1-203ENST00000460750 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
KCNT1-203ENST00000460750 ITGAEP38570 1179 aa23.67■■□□□ 1.38
KCNT1-203ENST00000460750 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
KCNT1-203ENST00000460750 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
KCNT1-203ENST00000460750 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
KCNT1-203ENST00000460750 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
KCNT1-203ENST00000460750 BCL11AQ9H165 835 aa23.47■■□□□ 1.35
KCNT1-203ENST00000460750 ANP32EQ9BTT0 268 aa23.44■■□□□ 1.34
KCNT1-203ENST00000460750 EIF5BO60841 1220 aaKnown RBP23.44■■□□□ 1.34
KCNT1-203ENST00000460750 MYT1LQ9UL68 1186 aa23.41■■□□□ 1.34
KCNT1-203ENST00000460750 POLR3GLQ9BT43 218 aa23.38■■□□□ 1.33
KCNT1-203ENST00000460750 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
KCNT1-203ENST00000460750 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
KCNT1-203ENST00000460750 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
KCNT1-203ENST00000460750 GLIPR1L2Q4G1C9 344 aa23.18■■□□□ 1.3
KCNT1-203ENST00000460750 FKBP8Q14318 412 aa23.16■■□□□ 1.3
KCNT1-203ENST00000460750 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
KCNT1-203ENST00000460750 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
KCNT1-203ENST00000460750 NACADO15069 1562 aa23.13■■□□□ 1.29
KCNT1-203ENST00000460750 ANP32AP39687 249 aaKnown RBP23.09■■□□□ 1.29
KCNT1-203ENST00000460750 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
KCNT1-203ENST00000460750 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
KCNT1-203ENST00000460750 ANP32CO43423 234 aa22.99■■□□□ 1.27
KCNT1-203ENST00000460750 NBR1Q14596 966 aa22.98■■□□□ 1.27
KCNT1-203ENST00000460750 MIER1Q8N108 512 aa22.93■■□□□ 1.26
KCNT1-203ENST00000460750 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
KCNT1-203ENST00000460750 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
KCNT1-203ENST00000460750 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
KCNT1-203ENST00000460750 NPM2Q86SE8 214 aaKnown RBP22.79■■□□□ 1.24
KCNT1-203ENST00000460750 ZBTB47Q9UFB7 747 aaPredicted RBP22.75■■□□□ 1.23
KCNT1-203ENST00000460750 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
KCNT1-203ENST00000460750 P3H3Q8IVL6 736 aa22.69■■□□□ 1.22
KCNT1-203ENST00000460750 SUPT16HQ9Y5B9 1047 aaKnown RBP22.65■■□□□ 1.22
KCNT1-203ENST00000460750 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
KCNT1-203ENST00000460750 RTN4Q9NQC3 1192 aaKnown RBP22.59■■□□□ 1.21
KCNT1-203ENST00000460750 EEA1Q15075 1411 aa22.55■■□□□ 1.2
KCNT1-203ENST00000460750 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
KCNT1-203ENST00000460750 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
KCNT1-203ENST00000460750 HNRNPUQ00839 825 aaKnown RBP eCLIP22.53■■□□□ 1.2
KCNT1-203ENST00000460750 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
KCNT1-203ENST00000460750 DEKP35659 375 aaKnown RBP22.53■■□□□ 1.2
KCNT1-203ENST00000460750 FBLN2P98095 1184 aa22.52■■□□□ 1.2
KCNT1-203ENST00000460750 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
KCNT1-203ENST00000460750 CLIP1P30622 1438 aa22.45■■□□□ 1.19
KCNT1-203ENST00000460750 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
KCNT1-203ENST00000460750 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
KCNT1-203ENST00000460750 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
KCNT1-203ENST00000460750 GOLGA3Q08378 1498 aa22.42■■□□□ 1.18
KCNT1-203ENST00000460750 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
KCNT1-203ENST00000460750 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
KCNT1-203ENST00000460750 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
KCNT1-203ENST00000460750 NEFMP07197 916 aa22.37■■□□□ 1.17
KCNT1-203ENST00000460750 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
KCNT1-203ENST00000460750 ANP32BQ92688 251 aaKnown RBP22.32■■□□□ 1.16
KCNT1-203ENST00000460750 NOP58Q9Y2X3 529 aaKnown RBP22.32■■□□□ 1.16
KCNT1-203ENST00000460750 ERICH6BQ5W0A0 696 aa22.32■■□□□ 1.16
KCNT1-203ENST00000460750 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
KCNT1-203ENST00000460750 TONSLQ96HA7 1378 aa22.26■■□□□ 1.15
KCNT1-203ENST00000460750 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
KCNT1-203ENST00000460750 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
KCNT1-203ENST00000460750 ARXQ96QS3 562 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms