RNA–Protein interactions for RNA: ENST00000450932.2

SLF1-202, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 1 (best)

Gene SLF1, Length 2,318 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-202ENST00000450932 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
SLF1-202ENST00000450932 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
SLF1-202ENST00000450932 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
SLF1-202ENST00000450932 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
SLF1-202ENST00000450932 FOXD1Q16676 465 aa14.91□□□□□ -0.02
SLF1-202ENST00000450932 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
SLF1-202ENST00000450932 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
SLF1-202ENST00000450932 ADRA2BP18089 450 aa14.08□□□□□ -0.16
SLF1-202ENST00000450932 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
SLF1-202ENST00000450932 MSH5O43196 834 aa13.87□□□□□ -0.19
SLF1-202ENST00000450932 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
SLF1-202ENST00000450932 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
SLF1-202ENST00000450932 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
SLF1-202ENST00000450932 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
SLF1-202ENST00000450932 DMRT2Q9Y5R5 561 aa12.71□□□□□ -0.38
SLF1-202ENST00000450932 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
SLF1-202ENST00000450932 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
SLF1-202ENST00000450932 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
SLF1-202ENST00000450932 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
SLF1-202ENST00000450932 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
SLF1-202ENST00000450932 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
SLF1-202ENST00000450932 KCNA4P22459 653 aa12.06□□□□□ -0.48
SLF1-202ENST00000450932 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
SLF1-202ENST00000450932 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
SLF1-202ENST00000450932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLF1-202ENST00000450932 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
SLF1-202ENST00000450932 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
SLF1-202ENST00000450932 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.57
SLF1-202ENST00000450932 SLC4A2P04920 1241 aa11.51□□□□□ -0.57
SLF1-202ENST00000450932 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
SLF1-202ENST00000450932 CAPN15O75808 1086 aa11.34□□□□□ -0.59
SLF1-202ENST00000450932 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
SLF1-202ENST00000450932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
SLF1-202ENST00000450932 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
SLF1-202ENST00000450932 APLP2Q06481 763 aa11.23□□□□□ -0.61
SLF1-202ENST00000450932 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
SLF1-202ENST00000450932 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.62
SLF1-202ENST00000450932 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.62
SLF1-202ENST00000450932 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
SLF1-202ENST00000450932 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
SLF1-202ENST00000450932 DSG3P32926 999 aa11.16□□□□□ -0.62
SLF1-202ENST00000450932 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
SLF1-202ENST00000450932 ABCB7O75027 752 aa11.09□□□□□ -0.63
SLF1-202ENST00000450932 ZBTB22O15209 634 aa11.07□□□□□ -0.64
SLF1-202ENST00000450932 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
SLF1-202ENST00000450932 POLA2Q14181 598 aa10.92□□□□□ -0.66
SLF1-202ENST00000450932 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
SLF1-202ENST00000450932 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
SLF1-202ENST00000450932 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
SLF1-202ENST00000450932 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
SLF1-202ENST00000450932 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
SLF1-202ENST00000450932 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
SLF1-202ENST00000450932 FBLN2P98095 1184 aa10.52□□□□□ -0.72
SLF1-202ENST00000450932 AKT1S1Q96B36 256 aa10.44□□□□□ -0.74
SLF1-202ENST00000450932 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
SLF1-202ENST00000450932 POTEHQ6S545 545 aa10.42□□□□□ -0.74
SLF1-202ENST00000450932 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
SLF1-202ENST00000450932 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
SLF1-202ENST00000450932 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
SLF1-202ENST00000450932 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
SLF1-202ENST00000450932 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
SLF1-202ENST00000450932 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
SLF1-202ENST00000450932 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
SLF1-202ENST00000450932 SSUH2Q9Y2M2 353 aa10.21□□□□□ -0.77
SLF1-202ENST00000450932 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
SLF1-202ENST00000450932 PABPN1Q86U42 306 aaKnown RBP eCLIP10.16□□□□□ -0.78
SLF1-202ENST00000450932 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
SLF1-202ENST00000450932 SPDYE1Q8NFV5 336 aaPredicted RBP10.15□□□□□ -0.78
SLF1-202ENST00000450932 FXR2P51116 673 aaKnown RBP eCLIP10.09□□□□□ -0.79
SLF1-202ENST00000450932 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
SLF1-202ENST00000450932 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
SLF1-202ENST00000450932 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
SLF1-202ENST00000450932 HAX1O00165 279 aa9.98□□□□□ -0.81
SLF1-202ENST00000450932 CHADLQ6NUI6 762 aa9.95□□□□□ -0.82
SLF1-202ENST00000450932 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
SLF1-202ENST00000450932 ABCC9O60706 1549 aa9.88□□□□□ -0.83
SLF1-202ENST00000450932 SP7Q8TDD2 431 aaPredicted RBP9.85□□□□□ -0.83
SLF1-202ENST00000450932 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
SLF1-202ENST00000450932 EVX2Q03828 476 aa9.82□□□□□ -0.84
SLF1-202ENST00000450932 FARP1Q9Y4F1 1045 aaPredicted RBP9.79□□□□□ -0.84
SLF1-202ENST00000450932 FKBP8Q14318 412 aa9.77□□□□□ -0.85
SLF1-202ENST00000450932 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
SLF1-202ENST00000450932 RTN4Q9NQC3 1192 aaKnown RBP9.76□□□□□ -0.85
SLF1-202ENST00000450932 CREBZFQ9NS37 354 aa9.76□□□□□ -0.85
SLF1-202ENST00000450932 PROM2Q8N271 834 aa9.76□□□□□ -0.85
SLF1-202ENST00000450932 CD44P16070 742 aaKnown RBP9.7□□□□□ -0.86
SLF1-202ENST00000450932 MIER1Q8N108 512 aa9.62□□□□□ -0.87
SLF1-202ENST00000450932 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
SLF1-202ENST00000450932 GABBR2O75899 941 aa9.61□□□□□ -0.87
SLF1-202ENST00000450932 ZRANB1Q9UGI0 708 aa9.6□□□□□ -0.87
SLF1-202ENST00000450932 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
SLF1-202ENST00000450932 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
SLF1-202ENST00000450932 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
SLF1-202ENST00000450932 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
SLF1-202ENST00000450932 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
SLF1-202ENST00000450932 RB1CC1Q8TDY2 1594 aa9.5□□□□□ -0.89
SLF1-202ENST00000450932 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
SLF1-202ENST00000450932 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
SLF1-202ENST00000450932 PHF12Q96QT6 1004 aa9.48□□□□□ -0.89
SLF1-202ENST00000450932 CLCN6P51797 869 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 260.4 ms