RNA–Protein interactions for RNA: ENST00000450299.6

CCDC196-206, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 722 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-206ENST00000450299 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
CCDC196-206ENST00000450299 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
CCDC196-206ENST00000450299 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
CCDC196-206ENST00000450299 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
CCDC196-206ENST00000450299 FOXD1Q16676 465 aa21.15■□□□□ 0.98
CCDC196-206ENST00000450299 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
CCDC196-206ENST00000450299 MSH5O43196 834 aa19.93■□□□□ 0.78
CCDC196-206ENST00000450299 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
CCDC196-206ENST00000450299 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
CCDC196-206ENST00000450299 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
CCDC196-206ENST00000450299 ADRA2BP18089 450 aa19.39■□□□□ 0.69
CCDC196-206ENST00000450299 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
CCDC196-206ENST00000450299 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
CCDC196-206ENST00000450299 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
CCDC196-206ENST00000450299 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
CCDC196-206ENST00000450299 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
CCDC196-206ENST00000450299 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
CCDC196-206ENST00000450299 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
CCDC196-206ENST00000450299 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
CCDC196-206ENST00000450299 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
CCDC196-206ENST00000450299 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
CCDC196-206ENST00000450299 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
CCDC196-206ENST00000450299 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
CCDC196-206ENST00000450299 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
CCDC196-206ENST00000450299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC196-206ENST00000450299 NPM3O75607 178 aaKnown RBP16.1■□□□□ 0.17
CCDC196-206ENST00000450299 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
CCDC196-206ENST00000450299 DSG3P32926 999 aa15.77■□□□□ 0.12
CCDC196-206ENST00000450299 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
CCDC196-206ENST00000450299 CAPN15O75808 1086 aa15.76■□□□□ 0.11
CCDC196-206ENST00000450299 POTEHQ6S545 545 aa15.71■□□□□ 0.11
CCDC196-206ENST00000450299 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
CCDC196-206ENST00000450299 KCNA4P22459 653 aa15.44■□□□□ 0.06
CCDC196-206ENST00000450299 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
CCDC196-206ENST00000450299 APLP2Q06481 763 aa15.37■□□□□ 0.05
CCDC196-206ENST00000450299 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
CCDC196-206ENST00000450299 ABCB7O75027 752 aa15.35■□□□□ 0.05
CCDC196-206ENST00000450299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
CCDC196-206ENST00000450299 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
CCDC196-206ENST00000450299 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
CCDC196-206ENST00000450299 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
CCDC196-206ENST00000450299 POLA2Q14181 598 aa14.92□□□□□ -0.02
CCDC196-206ENST00000450299 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
CCDC196-206ENST00000450299 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
CCDC196-206ENST00000450299 NISCHQ9Y2I1 1504 aa14.73□□□□□ -0.05
CCDC196-206ENST00000450299 ABCC9O60706 1549 aa14.66□□□□□ -0.06
CCDC196-206ENST00000450299 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
CCDC196-206ENST00000450299 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
CCDC196-206ENST00000450299 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
CCDC196-206ENST00000450299 SP7Q8TDD2 431 aaPredicted RBP14.53□□□□□ -0.08
CCDC196-206ENST00000450299 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
CCDC196-206ENST00000450299 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
CCDC196-206ENST00000450299 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
CCDC196-206ENST00000450299 PIP4P2Q8N4L2 257 aa14.45□□□□□ -0.1
CCDC196-206ENST00000450299 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
CCDC196-206ENST00000450299 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
CCDC196-206ENST00000450299 HAX1O00165 279 aa14.3□□□□□ -0.12
CCDC196-206ENST00000450299 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC196-206ENST00000450299 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
CCDC196-206ENST00000450299 ZBTB22O15209 634 aa14.19□□□□□ -0.14
CCDC196-206ENST00000450299 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
CCDC196-206ENST00000450299 EVX2Q03828 476 aa14.1□□□□□ -0.15
CCDC196-206ENST00000450299 SPDYE2BA6NHP3 402 aa14.09□□□□□ -0.15
CCDC196-206ENST00000450299 SPDYE6P0CI01 402 aa14.09□□□□□ -0.15
CCDC196-206ENST00000450299 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
CCDC196-206ENST00000450299 FBLN2P98095 1184 aa14.04□□□□□ -0.16
CCDC196-206ENST00000450299 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
CCDC196-206ENST00000450299 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
CCDC196-206ENST00000450299 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
CCDC196-206ENST00000450299 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
CCDC196-206ENST00000450299 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
CCDC196-206ENST00000450299 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
CCDC196-206ENST00000450299 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
CCDC196-206ENST00000450299 GABBR2O75899 941 aa13.75□□□□□ -0.21
CCDC196-206ENST00000450299 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
CCDC196-206ENST00000450299 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
CCDC196-206ENST00000450299 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC196-206ENST00000450299 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
CCDC196-206ENST00000450299 LHX8Q68G74 356 aa13.63□□□□□ -0.23
CCDC196-206ENST00000450299 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
CCDC196-206ENST00000450299 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
CCDC196-206ENST00000450299 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
CCDC196-206ENST00000450299 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
CCDC196-206ENST00000450299 CLCN6P51797 869 aa13.39□□□□□ -0.27
CCDC196-206ENST00000450299 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
CCDC196-206ENST00000450299 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
CCDC196-206ENST00000450299 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
CCDC196-206ENST00000450299 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
CCDC196-206ENST00000450299 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
CCDC196-206ENST00000450299 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
CCDC196-206ENST00000450299 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
CCDC196-206ENST00000450299 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
CCDC196-206ENST00000450299 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
CCDC196-206ENST00000450299 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
CCDC196-206ENST00000450299 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
CCDC196-206ENST00000450299 NACADO15069 1562 aa13.13□□□□□ -0.31
CCDC196-206ENST00000450299 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
CCDC196-206ENST00000450299 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
CCDC196-206ENST00000450299 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
CCDC196-206ENST00000450299 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms