RNA–Protein interactions for RNA: ENST00000448623.5

GTF2B-203, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-203ENST00000448623 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
GTF2B-203ENST00000448623 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
GTF2B-203ENST00000448623 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
GTF2B-203ENST00000448623 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
GTF2B-203ENST00000448623 FOXD1Q16676 465 aa18.85■□□□□ 0.61
GTF2B-203ENST00000448623 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
GTF2B-203ENST00000448623 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
GTF2B-203ENST00000448623 ADRA2BP18089 450 aa17.85■□□□□ 0.45
GTF2B-203ENST00000448623 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
GTF2B-203ENST00000448623 MSH5O43196 834 aa17.55■□□□□ 0.4
GTF2B-203ENST00000448623 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
GTF2B-203ENST00000448623 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
GTF2B-203ENST00000448623 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
GTF2B-203ENST00000448623 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
GTF2B-203ENST00000448623 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
GTF2B-203ENST00000448623 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
GTF2B-203ENST00000448623 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
GTF2B-203ENST00000448623 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
GTF2B-203ENST00000448623 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
GTF2B-203ENST00000448623 KCNA4P22459 653 aa15.57■□□□□ 0.08
GTF2B-203ENST00000448623 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
GTF2B-203ENST00000448623 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
GTF2B-203ENST00000448623 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
GTF2B-203ENST00000448623 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
GTF2B-203ENST00000448623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
GTF2B-203ENST00000448623 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
GTF2B-203ENST00000448623 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
GTF2B-203ENST00000448623 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
GTF2B-203ENST00000448623 SLC4A2P04920 1241 aa14.75□□□□□ -0.05
GTF2B-203ENST00000448623 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
GTF2B-203ENST00000448623 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
GTF2B-203ENST00000448623 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
GTF2B-203ENST00000448623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
GTF2B-203ENST00000448623 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
GTF2B-203ENST00000448623 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
GTF2B-203ENST00000448623 APLP2Q06481 763 aa14.37□□□□□ -0.11
GTF2B-203ENST00000448623 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
GTF2B-203ENST00000448623 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
GTF2B-203ENST00000448623 ZBTB22O15209 634 aa14.31□□□□□ -0.12
GTF2B-203ENST00000448623 CAPN15O75808 1086 aa14.31□□□□□ -0.12
GTF2B-203ENST00000448623 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
GTF2B-203ENST00000448623 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
GTF2B-203ENST00000448623 DSG3P32926 999 aa14.15□□□□□ -0.14
GTF2B-203ENST00000448623 ABCC9O60706 1549 aa14.02□□□□□ -0.16
GTF2B-203ENST00000448623 ABCB7O75027 752 aa14□□□□□ -0.17
GTF2B-203ENST00000448623 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
GTF2B-203ENST00000448623 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
GTF2B-203ENST00000448623 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
GTF2B-203ENST00000448623 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
GTF2B-203ENST00000448623 POLA2Q14181 598 aa13.88□□□□□ -0.19
GTF2B-203ENST00000448623 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
GTF2B-203ENST00000448623 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
GTF2B-203ENST00000448623 FBLN2P98095 1184 aa13.47□□□□□ -0.25
GTF2B-203ENST00000448623 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
GTF2B-203ENST00000448623 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
GTF2B-203ENST00000448623 CCDC180Q9P1Z9 1646 aa13.3□□□□□ -0.28
GTF2B-203ENST00000448623 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
GTF2B-203ENST00000448623 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
GTF2B-203ENST00000448623 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
GTF2B-203ENST00000448623 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
GTF2B-203ENST00000448623 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
GTF2B-203ENST00000448623 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
GTF2B-203ENST00000448623 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
GTF2B-203ENST00000448623 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
GTF2B-203ENST00000448623 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
GTF2B-203ENST00000448623 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
GTF2B-203ENST00000448623 POTEHQ6S545 545 aa12.99□□□□□ -0.33
GTF2B-203ENST00000448623 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
GTF2B-203ENST00000448623 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
GTF2B-203ENST00000448623 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
GTF2B-203ENST00000448623 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
GTF2B-203ENST00000448623 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
GTF2B-203ENST00000448623 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
GTF2B-203ENST00000448623 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
GTF2B-203ENST00000448623 NACADO15069 1562 aa12.77□□□□□ -0.36
GTF2B-203ENST00000448623 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
GTF2B-203ENST00000448623 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
GTF2B-203ENST00000448623 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
GTF2B-203ENST00000448623 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
GTF2B-203ENST00000448623 PROM2Q8N271 834 aa12.71□□□□□ -0.37
GTF2B-203ENST00000448623 CECR2Q9BXF3 1484 aa12.67□□□□□ -0.38
GTF2B-203ENST00000448623 FKBP8Q14318 412 aa12.67□□□□□ -0.38
GTF2B-203ENST00000448623 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
GTF2B-203ENST00000448623 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
GTF2B-203ENST00000448623 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
GTF2B-203ENST00000448623 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
GTF2B-203ENST00000448623 HAX1O00165 279 aa12.49□□□□□ -0.41
GTF2B-203ENST00000448623 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
GTF2B-203ENST00000448623 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
GTF2B-203ENST00000448623 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
GTF2B-203ENST00000448623 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
GTF2B-203ENST00000448623 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
GTF2B-203ENST00000448623 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
GTF2B-203ENST00000448623 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
GTF2B-203ENST00000448623 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
GTF2B-203ENST00000448623 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
GTF2B-203ENST00000448623 EVX2Q03828 476 aa12.32□□□□□ -0.44
GTF2B-203ENST00000448623 MIER1Q8N108 512 aa12.32□□□□□ -0.44
GTF2B-203ENST00000448623 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
GTF2B-203ENST00000448623 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms