RNA–Protein interactions for RNA: ENST00000446115.1

LINC01277-202, Transcript of long intergenic non-protein coding RNA 1277, humanhuman

TSL 3

Gene LINC01277, Length 783 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01277-202ENST00000446115 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
LINC01277-202ENST00000446115 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
LINC01277-202ENST00000446115 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
LINC01277-202ENST00000446115 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
LINC01277-202ENST00000446115 FOXD1Q16676 465 aa20.5■□□□□ 0.87
LINC01277-202ENST00000446115 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
LINC01277-202ENST00000446115 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
LINC01277-202ENST00000446115 MSH5O43196 834 aa19.19■□□□□ 0.66
LINC01277-202ENST00000446115 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
LINC01277-202ENST00000446115 ADRA2BP18089 450 aa19.14■□□□□ 0.65
LINC01277-202ENST00000446115 POTEDQ86YR6 584 aa18.67■□□□□ 0.58
LINC01277-202ENST00000446115 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
LINC01277-202ENST00000446115 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
LINC01277-202ENST00000446115 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
LINC01277-202ENST00000446115 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
LINC01277-202ENST00000446115 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
LINC01277-202ENST00000446115 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
LINC01277-202ENST00000446115 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
LINC01277-202ENST00000446115 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
LINC01277-202ENST00000446115 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
LINC01277-202ENST00000446115 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
LINC01277-202ENST00000446115 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
LINC01277-202ENST00000446115 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
LINC01277-202ENST00000446115 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
LINC01277-202ENST00000446115 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
LINC01277-202ENST00000446115 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
LINC01277-202ENST00000446115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
LINC01277-202ENST00000446115 KCNA4P22459 653 aa16.03■□□□□ 0.16
LINC01277-202ENST00000446115 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
LINC01277-202ENST00000446115 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
LINC01277-202ENST00000446115 ABCC9O60706 1549 aa15.62■□□□□ 0.09
LINC01277-202ENST00000446115 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
LINC01277-202ENST00000446115 CAPN15O75808 1086 aa15.48■□□□□ 0.07
LINC01277-202ENST00000446115 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
LINC01277-202ENST00000446115 DSG3P32926 999 aa15.34■□□□□ 0.05
LINC01277-202ENST00000446115 APLP2Q06481 763 aa15.29■□□□□ 0.04
LINC01277-202ENST00000446115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
LINC01277-202ENST00000446115 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
LINC01277-202ENST00000446115 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
LINC01277-202ENST00000446115 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
LINC01277-202ENST00000446115 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
LINC01277-202ENST00000446115 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
LINC01277-202ENST00000446115 ABCB7O75027 752 aa15.11■□□□□ 0.01
LINC01277-202ENST00000446115 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
LINC01277-202ENST00000446115 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
LINC01277-202ENST00000446115 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
LINC01277-202ENST00000446115 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
LINC01277-202ENST00000446115 NACADO15069 1562 aa14.91□□□□□ -0.02
LINC01277-202ENST00000446115 POLA2Q14181 598 aa14.81□□□□□ -0.04
LINC01277-202ENST00000446115 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
LINC01277-202ENST00000446115 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
LINC01277-202ENST00000446115 ZBTB22O15209 634 aa14.7□□□□□ -0.06
LINC01277-202ENST00000446115 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
LINC01277-202ENST00000446115 POTEHQ6S545 545 aa14.65□□□□□ -0.06
LINC01277-202ENST00000446115 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
LINC01277-202ENST00000446115 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC01277-202ENST00000446115 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
LINC01277-202ENST00000446115 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
LINC01277-202ENST00000446115 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
LINC01277-202ENST00000446115 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
LINC01277-202ENST00000446115 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
LINC01277-202ENST00000446115 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
LINC01277-202ENST00000446115 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
LINC01277-202ENST00000446115 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
LINC01277-202ENST00000446115 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
LINC01277-202ENST00000446115 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
LINC01277-202ENST00000446115 FBLN2P98095 1184 aa14.19□□□□□ -0.14
LINC01277-202ENST00000446115 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
LINC01277-202ENST00000446115 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
LINC01277-202ENST00000446115 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
LINC01277-202ENST00000446115 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
LINC01277-202ENST00000446115 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
LINC01277-202ENST00000446115 SPDYE2BA6NHP3 402 aa14.06□□□□□ -0.16
LINC01277-202ENST00000446115 SPDYE6P0CI01 402 aa14.06□□□□□ -0.16
LINC01277-202ENST00000446115 SPDYE2Q495Y8 402 aa14.06□□□□□ -0.16
LINC01277-202ENST00000446115 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
LINC01277-202ENST00000446115 PITPNM1O00562 1244 aa14.03□□□□□ -0.16
LINC01277-202ENST00000446115 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
LINC01277-202ENST00000446115 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
LINC01277-202ENST00000446115 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
LINC01277-202ENST00000446115 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC01277-202ENST00000446115 SSUH2Q9Y2M2 353 aa13.85□□□□□ -0.19
LINC01277-202ENST00000446115 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
LINC01277-202ENST00000446115 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
LINC01277-202ENST00000446115 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
LINC01277-202ENST00000446115 HAX1O00165 279 aa13.75□□□□□ -0.21
LINC01277-202ENST00000446115 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
LINC01277-202ENST00000446115 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
LINC01277-202ENST00000446115 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
LINC01277-202ENST00000446115 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.22
LINC01277-202ENST00000446115 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
LINC01277-202ENST00000446115 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
LINC01277-202ENST00000446115 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
LINC01277-202ENST00000446115 BAZ1BQ9UIG0 1483 aaKnown RBP13.62□□□□□ -0.23
LINC01277-202ENST00000446115 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
LINC01277-202ENST00000446115 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
LINC01277-202ENST00000446115 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
LINC01277-202ENST00000446115 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
LINC01277-202ENST00000446115 EVX2Q03828 476 aa13.54□□□□□ -0.24
LINC01277-202ENST00000446115 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms