RNA–Protein interactions for RNA: ENST00000445027.2

LINC01047-202, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5

Gene LINC01047, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-202ENST00000445027 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
LINC01047-202ENST00000445027 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
LINC01047-202ENST00000445027 POTEDQ86YR6 584 aa18.08■□□□□ 0.48
LINC01047-202ENST00000445027 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
LINC01047-202ENST00000445027 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
LINC01047-202ENST00000445027 FOXD1Q16676 465 aa16.87■□□□□ 0.29
LINC01047-202ENST00000445027 MSH5O43196 834 aa16.39■□□□□ 0.21
LINC01047-202ENST00000445027 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
LINC01047-202ENST00000445027 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
LINC01047-202ENST00000445027 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
LINC01047-202ENST00000445027 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
LINC01047-202ENST00000445027 ADRA2BP18089 450 aa14.66□□□□□ -0.06
LINC01047-202ENST00000445027 NISCHQ9Y2I1 1504 aa14.19□□□□□ -0.14
LINC01047-202ENST00000445027 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
LINC01047-202ENST00000445027 POTEHQ6S545 545 aa13.96□□□□□ -0.17
LINC01047-202ENST00000445027 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
LINC01047-202ENST00000445027 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
LINC01047-202ENST00000445027 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
LINC01047-202ENST00000445027 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
LINC01047-202ENST00000445027 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
LINC01047-202ENST00000445027 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
LINC01047-202ENST00000445027 KCNA4P22459 653 aa13.21□□□□□ -0.29
LINC01047-202ENST00000445027 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
LINC01047-202ENST00000445027 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
LINC01047-202ENST00000445027 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
LINC01047-202ENST00000445027 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
LINC01047-202ENST00000445027 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
LINC01047-202ENST00000445027 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
LINC01047-202ENST00000445027 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
LINC01047-202ENST00000445027 DSG3P32926 999 aa12.49□□□□□ -0.41
LINC01047-202ENST00000445027 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
LINC01047-202ENST00000445027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01047-202ENST00000445027 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
LINC01047-202ENST00000445027 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.43
LINC01047-202ENST00000445027 CAPN15O75808 1086 aa12.33□□□□□ -0.44
LINC01047-202ENST00000445027 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
LINC01047-202ENST00000445027 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
LINC01047-202ENST00000445027 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
LINC01047-202ENST00000445027 ZBTB22O15209 634 aa12.15□□□□□ -0.46
LINC01047-202ENST00000445027 ABCC9O60706 1549 aa12.1□□□□□ -0.47
LINC01047-202ENST00000445027 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
LINC01047-202ENST00000445027 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
LINC01047-202ENST00000445027 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
LINC01047-202ENST00000445027 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
LINC01047-202ENST00000445027 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
LINC01047-202ENST00000445027 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
LINC01047-202ENST00000445027 ABCB7O75027 752 aa11.86□□□□□ -0.51
LINC01047-202ENST00000445027 HAX1O00165 279 aa11.85□□□□□ -0.51
LINC01047-202ENST00000445027 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
LINC01047-202ENST00000445027 ZCCHC6Q5VYS8 1495 aaKnown RBP11.82□□□□□ -0.52
LINC01047-202ENST00000445027 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
LINC01047-202ENST00000445027 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
LINC01047-202ENST00000445027 APLP2Q06481 763 aa11.71□□□□□ -0.53
LINC01047-202ENST00000445027 LHX8Q68G74 356 aa11.71□□□□□ -0.53
LINC01047-202ENST00000445027 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
LINC01047-202ENST00000445027 NACADO15069 1562 aa11.66□□□□□ -0.54
LINC01047-202ENST00000445027 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.54
LINC01047-202ENST00000445027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
LINC01047-202ENST00000445027 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
LINC01047-202ENST00000445027 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
LINC01047-202ENST00000445027 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
LINC01047-202ENST00000445027 RB1CC1Q8TDY2 1594 aa11.59□□□□□ -0.55
LINC01047-202ENST00000445027 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
LINC01047-202ENST00000445027 ATF5Q9Y2D1 282 aaPredicted RBP11.55□□□□□ -0.56
LINC01047-202ENST00000445027 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01047-202ENST00000445027 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
LINC01047-202ENST00000445027 EVX2Q03828 476 aa11.46□□□□□ -0.57
LINC01047-202ENST00000445027 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
LINC01047-202ENST00000445027 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
LINC01047-202ENST00000445027 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC01047-202ENST00000445027 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
LINC01047-202ENST00000445027 BICRAQ9NZM4 1560 aa11.32□□□□□ -0.6
LINC01047-202ENST00000445027 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
LINC01047-202ENST00000445027 GABBR2O75899 941 aa11.21□□□□□ -0.61
LINC01047-202ENST00000445027 POLA2Q14181 598 aa11.2□□□□□ -0.62
LINC01047-202ENST00000445027 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
LINC01047-202ENST00000445027 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
LINC01047-202ENST00000445027 POTEMA6NI47 508 aa11.1□□□□□ -0.63
LINC01047-202ENST00000445027 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
LINC01047-202ENST00000445027 FKBP8Q14318 412 aa11.06□□□□□ -0.64
LINC01047-202ENST00000445027 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
LINC01047-202ENST00000445027 FBLN2P98095 1184 aa11.04□□□□□ -0.64
LINC01047-202ENST00000445027 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
LINC01047-202ENST00000445027 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
LINC01047-202ENST00000445027 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
LINC01047-202ENST00000445027 EIF4G1Q04637 1599 aaKnown RBP10.97□□□□□ -0.65
LINC01047-202ENST00000445027 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
LINC01047-202ENST00000445027 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
LINC01047-202ENST00000445027 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
LINC01047-202ENST00000445027 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
LINC01047-202ENST00000445027 SUPT5HO00267 1087 aaKnown RBP10.92□□□□□ -0.66
LINC01047-202ENST00000445027 SMARCA4P51532 1647 aa10.89□□□□□ -0.67
LINC01047-202ENST00000445027 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
LINC01047-202ENST00000445027 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
LINC01047-202ENST00000445027 CC2D2AQ9P2K1 1620 aa10.88□□□□□ -0.67
LINC01047-202ENST00000445027 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
LINC01047-202ENST00000445027 NCAPD3P42695 1498 aa10.86□□□□□ -0.67
LINC01047-202ENST00000445027 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
LINC01047-202ENST00000445027 WIZO95785 1651 aa10.81□□□□□ -0.68
LINC01047-202ENST00000445027 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms