RNA–Protein interactions for RNA: ENST00000431299.1

FRMD3-205, Transcript of FERM domain containing 3, humanhuman

TSL 3

Gene FRMD3, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-205ENST00000431299 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
FRMD3-205ENST00000431299 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
FRMD3-205ENST00000431299 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
FRMD3-205ENST00000431299 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
FRMD3-205ENST00000431299 FOXD1Q16676 465 aa13.66□□□□□ -0.22
FRMD3-205ENST00000431299 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
FRMD3-205ENST00000431299 PPP6R1Q9UPN7 881 aa12.92□□□□□ -0.34
FRMD3-205ENST00000431299 ADRA2BP18089 450 aa12.86□□□□□ -0.35
FRMD3-205ENST00000431299 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
FRMD3-205ENST00000431299 MSH5O43196 834 aa12.69□□□□□ -0.38
FRMD3-205ENST00000431299 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
FRMD3-205ENST00000431299 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.45
FRMD3-205ENST00000431299 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
FRMD3-205ENST00000431299 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
FRMD3-205ENST00000431299 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
FRMD3-205ENST00000431299 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
FRMD3-205ENST00000431299 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
FRMD3-205ENST00000431299 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
FRMD3-205ENST00000431299 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
FRMD3-205ENST00000431299 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
FRMD3-205ENST00000431299 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
FRMD3-205ENST00000431299 KCNA4P22459 653 aa11.1□□□□□ -0.63
FRMD3-205ENST00000431299 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
FRMD3-205ENST00000431299 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
FRMD3-205ENST00000431299 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
FRMD3-205ENST00000431299 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.68
FRMD3-205ENST00000431299 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
FRMD3-205ENST00000431299 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
FRMD3-205ENST00000431299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.69
FRMD3-205ENST00000431299 ABCC9O60706 1549 aa10.63□□□□□ -0.71
FRMD3-205ENST00000431299 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
FRMD3-205ENST00000431299 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
FRMD3-205ENST00000431299 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
FRMD3-205ENST00000431299 SLC4A1APQ9BWU0 796 aaKnown RBP10.48□□□□□ -0.73
FRMD3-205ENST00000431299 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
FRMD3-205ENST00000431299 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
FRMD3-205ENST00000431299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.3□□□□□ -0.76
FRMD3-205ENST00000431299 HNRNPUL2Q1KMD3 747 aaKnown RBP10.3□□□□□ -0.76
FRMD3-205ENST00000431299 MYCNP04198 464 aaPredicted RBP10.29□□□□□ -0.76
FRMD3-205ENST00000431299 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
FRMD3-205ENST00000431299 CAPN15O75808 1086 aa10.27□□□□□ -0.77
FRMD3-205ENST00000431299 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
FRMD3-205ENST00000431299 ZBTB22O15209 634 aa10.25□□□□□ -0.77
FRMD3-205ENST00000431299 APLP2Q06481 763 aa10.25□□□□□ -0.77
FRMD3-205ENST00000431299 DSG3P32926 999 aa10.23□□□□□ -0.77
FRMD3-205ENST00000431299 ZCCHC6Q5VYS8 1495 aaKnown RBP10.22□□□□□ -0.77
FRMD3-205ENST00000431299 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
FRMD3-205ENST00000431299 RB1CC1Q8TDY2 1594 aa10.16□□□□□ -0.78
FRMD3-205ENST00000431299 NACADO15069 1562 aa10.15□□□□□ -0.78
FRMD3-205ENST00000431299 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
FRMD3-205ENST00000431299 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
FRMD3-205ENST00000431299 DCAF1Q9Y4B6 1507 aa10.07□□□□□ -0.8
FRMD3-205ENST00000431299 ABCB7O75027 752 aa10.06□□□□□ -0.8
FRMD3-205ENST00000431299 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
FRMD3-205ENST00000431299 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
FRMD3-205ENST00000431299 PABPN1Q86U42 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
FRMD3-205ENST00000431299 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
FRMD3-205ENST00000431299 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
FRMD3-205ENST00000431299 POLA2Q14181 598 aa9.95□□□□□ -0.82
FRMD3-205ENST00000431299 SHROOM4Q9ULL8 1493 aa9.95□□□□□ -0.82
FRMD3-205ENST00000431299 UNC13AQ9UPW8 1703 aa9.89□□□□□ -0.83
FRMD3-205ENST00000431299 BICRAQ9NZM4 1560 aa9.84□□□□□ -0.83
FRMD3-205ENST00000431299 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
FRMD3-205ENST00000431299 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
FRMD3-205ENST00000431299 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
FRMD3-205ENST00000431299 MKRN4PQ13434 485 aaPredicted RBP9.62□□□□□ -0.87
FRMD3-205ENST00000431299 CECR2Q9BXF3 1484 aa9.6□□□□□ -0.87
FRMD3-205ENST00000431299 EIF4G1Q04637 1599 aaKnown RBP9.59□□□□□ -0.87
FRMD3-205ENST00000431299 FBLN2P98095 1184 aa9.59□□□□□ -0.87
FRMD3-205ENST00000431299 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
FRMD3-205ENST00000431299 POTEHQ6S545 545 aa9.55□□□□□ -0.88
FRMD3-205ENST00000431299 CC2D2AQ9P2K1 1620 aa9.55□□□□□ -0.88
FRMD3-205ENST00000431299 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
FRMD3-205ENST00000431299 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
FRMD3-205ENST00000431299 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
FRMD3-205ENST00000431299 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
FRMD3-205ENST00000431299 MROH2BQ7Z745 1585 aa9.49□□□□□ -0.89
FRMD3-205ENST00000431299 BAZ1AQ9NRL2 1556 aaPredicted RBP9.49□□□□□ -0.89
FRMD3-205ENST00000431299 SMARCA4P51532 1647 aa9.49□□□□□ -0.89
FRMD3-205ENST00000431299 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
FRMD3-205ENST00000431299 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
FRMD3-205ENST00000431299 RTN4Q9NQC3 1192 aaKnown RBP9.44□□□□□ -0.9
FRMD3-205ENST00000431299 SSUH2Q9Y2M2 353 aa9.44□□□□□ -0.9
FRMD3-205ENST00000431299 ATAD2BQ9ULI0 1458 aa9.44□□□□□ -0.9
FRMD3-205ENST00000431299 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
FRMD3-205ENST00000431299 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
FRMD3-205ENST00000431299 WIZO95785 1651 aa9.39□□□□□ -0.91
FRMD3-205ENST00000431299 SMARCA2P51531 1590 aa9.39□□□□□ -0.91
FRMD3-205ENST00000431299 NCAPD3P42695 1498 aa9.39□□□□□ -0.91
FRMD3-205ENST00000431299 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
FRMD3-205ENST00000431299 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
FRMD3-205ENST00000431299 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
FRMD3-205ENST00000431299 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
FRMD3-205ENST00000431299 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
FRMD3-205ENST00000431299 HMGXB3Q12766 1538 aa9.31□□□□□ -0.92
FRMD3-205ENST00000431299 FXR2P51116 673 aaKnown RBP eCLIP9.27□□□□□ -0.93
FRMD3-205ENST00000431299 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
FRMD3-205ENST00000431299 SPDYE1Q8NFV5 336 aaPredicted RBP9.27□□□□□ -0.93
FRMD3-205ENST00000431299 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
FRMD3-205ENST00000431299 NESP48681 1621 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms