RNA–Protein interactions for RNA: ENST00000428799.1

XPNPEP3-203, Transcript of X-prolyl aminopeptidase 3, humanhuman

TSL 2

Gene XPNPEP3, Length 2,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPNPEP3-203ENST00000428799 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
XPNPEP3-203ENST00000428799 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
XPNPEP3-203ENST00000428799 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
XPNPEP3-203ENST00000428799 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
XPNPEP3-203ENST00000428799 MYT1Q01538 1121 aa15.15■□□□□ 0.02
XPNPEP3-203ENST00000428799 HRCP23327 699 aa15.08■□□□□ 0.01
XPNPEP3-203ENST00000428799 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
XPNPEP3-203ENST00000428799 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
XPNPEP3-203ENST00000428799 PCGF6Q9BYE7 350 aa14.91□□□□□ -0.02
XPNPEP3-203ENST00000428799 ZCCHC6Q5VYS8 1495 aaKnown RBP14.9□□□□□ -0.02
XPNPEP3-203ENST00000428799 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
XPNPEP3-203ENST00000428799 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
XPNPEP3-203ENST00000428799 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
XPNPEP3-203ENST00000428799 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
XPNPEP3-203ENST00000428799 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
XPNPEP3-203ENST00000428799 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
XPNPEP3-203ENST00000428799 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
XPNPEP3-203ENST00000428799 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.09
XPNPEP3-203ENST00000428799 DNAJC5Q9H3Z4 198 aa14.46□□□□□ -0.09
XPNPEP3-203ENST00000428799 ZEB1P37275 1124 aaPredicted RBP14.24□□□□□ -0.13
XPNPEP3-203ENST00000428799 PRKCSHP14314 528 aaPredicted RBP14.23□□□□□ -0.13
XPNPEP3-203ENST00000428799 FAM9AQ8IZU1 332 aaPredicted RBP14.14□□□□□ -0.15
XPNPEP3-203ENST00000428799 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
XPNPEP3-203ENST00000428799 ABCC9O60706 1549 aa14.13□□□□□ -0.15
XPNPEP3-203ENST00000428799 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
XPNPEP3-203ENST00000428799 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
XPNPEP3-203ENST00000428799 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
XPNPEP3-203ENST00000428799 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
XPNPEP3-203ENST00000428799 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
XPNPEP3-203ENST00000428799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
XPNPEP3-203ENST00000428799 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
XPNPEP3-203ENST00000428799 NEUROD1Q13562 356 aa13.87□□□□□ -0.19
XPNPEP3-203ENST00000428799 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
XPNPEP3-203ENST00000428799 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.2
XPNPEP3-203ENST00000428799 CENPBP07199 599 aaPredicted RBP13.81□□□□□ -0.2
XPNPEP3-203ENST00000428799 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
XPNPEP3-203ENST00000428799 APLP2Q06481 763 aa13.78□□□□□ -0.2
XPNPEP3-203ENST00000428799 DIEXFQ68CQ4 756 aaKnown RBP13.77□□□□□ -0.21
XPNPEP3-203ENST00000428799 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
XPNPEP3-203ENST00000428799 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
XPNPEP3-203ENST00000428799 WIZO95785 1651 aa13.68□□□□□ -0.22
XPNPEP3-203ENST00000428799 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
XPNPEP3-203ENST00000428799 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
XPNPEP3-203ENST00000428799 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
XPNPEP3-203ENST00000428799 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
XPNPEP3-203ENST00000428799 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
XPNPEP3-203ENST00000428799 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
XPNPEP3-203ENST00000428799 ANP32EQ9BTT0 268 aa13.54□□□□□ -0.24
XPNPEP3-203ENST00000428799 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
XPNPEP3-203ENST00000428799 NACADO15069 1562 aa13.53□□□□□ -0.24
XPNPEP3-203ENST00000428799 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.24
XPNPEP3-203ENST00000428799 SOGA1O94964 1423 aa13.47□□□□□ -0.25
XPNPEP3-203ENST00000428799 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
XPNPEP3-203ENST00000428799 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
XPNPEP3-203ENST00000428799 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
XPNPEP3-203ENST00000428799 MIER1Q8N108 512 aa13.44□□□□□ -0.26
XPNPEP3-203ENST00000428799 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
XPNPEP3-203ENST00000428799 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
XPNPEP3-203ENST00000428799 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
XPNPEP3-203ENST00000428799 SMARCA2P51531 1590 aa13.36□□□□□ -0.27
XPNPEP3-203ENST00000428799 EEA1Q15075 1411 aa13.33□□□□□ -0.28
XPNPEP3-203ENST00000428799 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
XPNPEP3-203ENST00000428799 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
XPNPEP3-203ENST00000428799 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
XPNPEP3-203ENST00000428799 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
XPNPEP3-203ENST00000428799 CLIP1P30622 1438 aa13.21□□□□□ -0.3
XPNPEP3-203ENST00000428799 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
XPNPEP3-203ENST00000428799 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
XPNPEP3-203ENST00000428799 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
XPNPEP3-203ENST00000428799 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
XPNPEP3-203ENST00000428799 KIF21BO75037 1637 aa13.15□□□□□ -0.3
XPNPEP3-203ENST00000428799 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
XPNPEP3-203ENST00000428799 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
XPNPEP3-203ENST00000428799 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
XPNPEP3-203ENST00000428799 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
XPNPEP3-203ENST00000428799 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
XPNPEP3-203ENST00000428799 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
XPNPEP3-203ENST00000428799 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
XPNPEP3-203ENST00000428799 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
XPNPEP3-203ENST00000428799 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
XPNPEP3-203ENST00000428799 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
XPNPEP3-203ENST00000428799 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
XPNPEP3-203ENST00000428799 UBE2Q2Q8WVN8 375 aa13□□□□□ -0.33
XPNPEP3-203ENST00000428799 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
XPNPEP3-203ENST00000428799 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.34
XPNPEP3-203ENST00000428799 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
XPNPEP3-203ENST00000428799 BCANQ96GW7 911 aa12.93□□□□□ -0.34
XPNPEP3-203ENST00000428799 ITGAEP38570 1179 aa12.92□□□□□ -0.34
XPNPEP3-203ENST00000428799 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
XPNPEP3-203ENST00000428799 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
XPNPEP3-203ENST00000428799 TOP2BQ02880 1626 aa12.9□□□□□ -0.34
XPNPEP3-203ENST00000428799 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.35
XPNPEP3-203ENST00000428799 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
XPNPEP3-203ENST00000428799 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
XPNPEP3-203ENST00000428799 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
XPNPEP3-203ENST00000428799 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
XPNPEP3-203ENST00000428799 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
XPNPEP3-203ENST00000428799 CUX2O14529 1486 aa12.86□□□□□ -0.35
XPNPEP3-203ENST00000428799 FKBP8Q14318 412 aa12.86□□□□□ -0.35
XPNPEP3-203ENST00000428799 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms