RNA–Protein interactions for RNA: ENST00000426022.6

NEK11-203, Transcript of NIMA related kinase 11, humanhuman

TSL 3

Gene NEK11, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-203ENST00000426022 AEBP2Q6ZN18 517 aaPredicted RBP33.27■■■□□ 2.92
NEK11-203ENST00000426022 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
NEK11-203ENST00000426022 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
NEK11-203ENST00000426022 SENP3Q9H4L4 574 aaPredicted RBP28.23■■■□□ 2.11
NEK11-203ENST00000426022 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
NEK11-203ENST00000426022 FOXD1Q16676 465 aa26.14■■□□□ 1.78
NEK11-203ENST00000426022 ADRA2BP18089 450 aa25.31■■□□□ 1.64
NEK11-203ENST00000426022 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
NEK11-203ENST00000426022 PIAS4Q8N2W9 510 aaPredicted RBP24.73■■□□□ 1.55
NEK11-203ENST00000426022 MSH5O43196 834 aa24.05■■□□□ 1.44
NEK11-203ENST00000426022 PPP4R3CPQ6ZMV5 832 aa23.53■■□□□ 1.36
NEK11-203ENST00000426022 KCNA4P22459 653 aa23.25■■□□□ 1.31
NEK11-203ENST00000426022 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
NEK11-203ENST00000426022 NCBP3Q53F19 620 aaKnown RBP23■■□□□ 1.27
NEK11-203ENST00000426022 MAPK8IP2Q13387 824 aaPredicted RBP22.88■■□□□ 1.25
NEK11-203ENST00000426022 CNKSR2Q8WXI2 1034 aa22.84■■□□□ 1.25
NEK11-203ENST00000426022 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
NEK11-203ENST00000426022 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
NEK11-203ENST00000426022 RNF216Q9NWF9 866 aaPredicted RBP22.34■■□□□ 1.17
NEK11-203ENST00000426022 HOXD11P31277 338 aaPredicted RBP22.19■■□□□ 1.14
NEK11-203ENST00000426022 SLC4A1APQ9BWU0 796 aaKnown RBP22.19■■□□□ 1.14
NEK11-203ENST00000426022 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
NEK11-203ENST00000426022 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
NEK11-203ENST00000426022 DCAF8L1A6NGE4 600 aa21.55■■□□□ 1.04
NEK11-203ENST00000426022 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
NEK11-203ENST00000426022 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
NEK11-203ENST00000426022 ZBTB22O15209 634 aa21.39■■□□□ 1.01
NEK11-203ENST00000426022 FOXD4L1Q9NU39 408 aa21.35■■□□□ 1.01
NEK11-203ENST00000426022 SLC4A2P04920 1241 aa21.33■■□□□ 1.01
NEK11-203ENST00000426022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.13■□□□□ 0.97
NEK11-203ENST00000426022 MYCNP04198 464 aaPredicted RBP20.95■□□□□ 0.94
NEK11-203ENST00000426022 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.93
NEK11-203ENST00000426022 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
NEK11-203ENST00000426022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
NEK11-203ENST00000426022 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
NEK11-203ENST00000426022 RNF39Q9H2S5 420 aa20.62■□□□□ 0.89
NEK11-203ENST00000426022 ATXN8OSP0DMR3 200 aa20.6■□□□□ 0.89
NEK11-203ENST00000426022 SAMD1Q6SPF0 538 aaPredicted RBP20.6■□□□□ 0.89
NEK11-203ENST00000426022 APLP2Q06481 763 aa20.41■□□□□ 0.86
NEK11-203ENST00000426022 C1QBPQ07021 282 aaKnown RBP20.39■□□□□ 0.85
NEK11-203ENST00000426022 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
NEK11-203ENST00000426022 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
NEK11-203ENST00000426022 CAPN15O75808 1086 aa20.08■□□□□ 0.81
NEK11-203ENST00000426022 ZNF219Q9P2Y4 722 aaPredicted RBP20.08■□□□□ 0.81
NEK11-203ENST00000426022 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
NEK11-203ENST00000426022 CACNB1Q02641 598 aaPredicted RBP19.89■□□□□ 0.77
NEK11-203ENST00000426022 POLA2Q14181 598 aa19.76■□□□□ 0.75
NEK11-203ENST00000426022 ABCB7O75027 752 aa19.7■□□□□ 0.74
NEK11-203ENST00000426022 DSG3P32926 999 aa19.69■□□□□ 0.74
NEK11-203ENST00000426022 FBLN2P98095 1184 aa19.5■□□□□ 0.71
NEK11-203ENST00000426022 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
NEK11-203ENST00000426022 MKRN4PQ13434 485 aaPredicted RBP19.47■□□□□ 0.71
NEK11-203ENST00000426022 FKBP8Q14318 412 aa19.39■□□□□ 0.69
NEK11-203ENST00000426022 SPDYE4A6NLX3 237 aa19.16■□□□□ 0.66
NEK11-203ENST00000426022 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
NEK11-203ENST00000426022 SPDYE2BA6NHP3 402 aa18.98■□□□□ 0.63
NEK11-203ENST00000426022 SPDYE6P0CI01 402 aa18.98■□□□□ 0.63
NEK11-203ENST00000426022 SPDYE2Q495Y8 402 aa18.98■□□□□ 0.63
NEK11-203ENST00000426022 ZNF692Q9BU19 519 aaPredicted RBP18.91■□□□□ 0.62
NEK11-203ENST00000426022 PROM2Q8N271 834 aa18.9■□□□□ 0.62
NEK11-203ENST00000426022 SSUH2Q9Y2M2 353 aa18.86■□□□□ 0.61
NEK11-203ENST00000426022 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
NEK11-203ENST00000426022 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
NEK11-203ENST00000426022 FBXO3Q9UK99 471 aa18.67■□□□□ 0.58
NEK11-203ENST00000426022 ABCC9O60706 1549 aa18.65■□□□□ 0.58
NEK11-203ENST00000426022 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
NEK11-203ENST00000426022 CCDC180Q9P1Z9 1646 aa18.55■□□□□ 0.56
NEK11-203ENST00000426022 STAG3Q9UJ98 1225 aa18.43■□□□□ 0.54
NEK11-203ENST00000426022 VASPP50552 380 aaPredicted RBP18.4■□□□□ 0.54
NEK11-203ENST00000426022 REM2Q8IYK8 340 aaPredicted RBP18.4■□□□□ 0.54
NEK11-203ENST00000426022 SPDYE1Q8NFV5 336 aaPredicted RBP18.36■□□□□ 0.53
NEK11-203ENST00000426022 CLEC11AQ9Y240 323 aa18.23■□□□□ 0.51
NEK11-203ENST00000426022 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
NEK11-203ENST00000426022 IFNLR1Q8IU57 520 aaPredicted RBP18.14■□□□□ 0.49
NEK11-203ENST00000426022 PLCD3Q8N3E9 789 aa18.14■□□□□ 0.49
NEK11-203ENST00000426022 MIER1Q8N108 512 aa18.12■□□□□ 0.49
NEK11-203ENST00000426022 PRR29P0C7W0 189 aa18.11■□□□□ 0.49
NEK11-203ENST00000426022 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
NEK11-203ENST00000426022 PLEKHG5O94827 1062 aa18.05■□□□□ 0.48
NEK11-203ENST00000426022 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
NEK11-203ENST00000426022 KLHL34Q8N239 644 aa18■□□□□ 0.47
NEK11-203ENST00000426022 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.47
NEK11-203ENST00000426022 CREBZFQ9NS37 354 aa17.94■□□□□ 0.46
NEK11-203ENST00000426022 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
NEK11-203ENST00000426022 SPOCK2Q92563 424 aa17.9■□□□□ 0.46
NEK11-203ENST00000426022 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.44
NEK11-203ENST00000426022 MNX1P50219 401 aaPredicted RBP17.78■□□□□ 0.44
NEK11-203ENST00000426022 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
NEK11-203ENST00000426022 PRKAR2AP13861 404 aaKnown RBP17.72■□□□□ 0.43
NEK11-203ENST00000426022 PIP4P2Q8N4L2 257 aa17.71■□□□□ 0.43
NEK11-203ENST00000426022 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
NEK11-203ENST00000426022 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
NEK11-203ENST00000426022 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
NEK11-203ENST00000426022 NUBP1P53384 320 aa17.65■□□□□ 0.42
NEK11-203ENST00000426022 FARP1Q9Y4F1 1045 aaPredicted RBP17.64■□□□□ 0.41
NEK11-203ENST00000426022 PKD2Q13563 968 aa17.63■□□□□ 0.41
NEK11-203ENST00000426022 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
NEK11-203ENST00000426022 NACADO15069 1562 aa17.54■□□□□ 0.4
NEK11-203ENST00000426022 GSE1Q14687 1217 aa17.53■□□□□ 0.4
NEK11-203ENST00000426022 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms