RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
CNKSR3-201ENST00000424998 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
CNKSR3-201ENST00000424998 PHF23Q9BUL5 403 aaPredicted RBP11.73□□□□□ -0.53
CNKSR3-201ENST00000424998 SENP3Q9H4L4 574 aaPredicted RBP11.4□□□□□ -0.58
CNKSR3-201ENST00000424998 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
CNKSR3-201ENST00000424998 FOXD1Q16676 465 aa10.55□□□□□ -0.72
CNKSR3-201ENST00000424998 ADRA2BP18089 450 aa10.35□□□□□ -0.75
CNKSR3-201ENST00000424998 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
CNKSR3-201ENST00000424998 PIAS4Q8N2W9 510 aaPredicted RBP10.05□□□□□ -0.8
CNKSR3-201ENST00000424998 KCNA4P22459 653 aa9.68□□□□□ -0.86
CNKSR3-201ENST00000424998 PPP4R3CPQ6ZMV5 832 aa9.67□□□□□ -0.86
CNKSR3-201ENST00000424998 MSH5O43196 834 aa9.65□□□□□ -0.86
CNKSR3-201ENST00000424998 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
CNKSR3-201ENST00000424998 SCAF1Q9H7N4 1312 aaKnown RBP9.47□□□□□ -0.89
CNKSR3-201ENST00000424998 CNKSR2Q8WXI2 1034 aa9.34□□□□□ -0.91
CNKSR3-201ENST00000424998 MAPK8IP2Q13387 824 aaPredicted RBP9.33□□□□□ -0.92
CNKSR3-201ENST00000424998 NPM3O75607 178 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-201ENST00000424998 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
CNKSR3-201ENST00000424998 SLC4A1APQ9BWU0 796 aaKnown RBP9.28□□□□□ -0.92
CNKSR3-201ENST00000424998 DMRT2Q9Y5R5 561 aa9.11□□□□□ -0.95
CNKSR3-201ENST00000424998 RNF216Q9NWF9 866 aaPredicted RBP9.09□□□□□ -0.95
CNKSR3-201ENST00000424998 CSRNP3Q8WYN3 585 aa9□□□□□ -0.97
CNKSR3-201ENST00000424998 HOXD11P31277 338 aaPredicted RBP8.98□□□□□ -0.97
CNKSR3-201ENST00000424998 ZBTB22O15209 634 aa8.88□□□□□ -0.99
CNKSR3-201ENST00000424998 DNAJC5BQ9UF47 199 aa8.88□□□□□ -0.99
CNKSR3-201ENST00000424998 DCAF8L1A6NGE4 600 aa8.85□□□□□ -0.99
CNKSR3-201ENST00000424998 FOXD4L1Q9NU39 408 aa8.85□□□□□ -0.99
CNKSR3-201ENST00000424998 POTEDQ86YR6 584 aa8.79□□□□□ -1
CNKSR3-201ENST00000424998 SLC4A2P04920 1241 aa8.73□□□□□ -1.01
CNKSR3-201ENST00000424998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.66□□□□□ -1.022e-9■□□□□ 11.1
CNKSR3-201ENST00000424998 NISCHQ9Y2I1 1504 aa8.65□□□□□ -1.02
CNKSR3-201ENST00000424998 MYCNP04198 464 aaPredicted RBP8.62□□□□□ -1.03
CNKSR3-201ENST00000424998 U3KPZ7 1027 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-201ENST00000424998 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
CNKSR3-201ENST00000424998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.06
CNKSR3-201ENST00000424998 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.06
CNKSR3-201ENST00000424998 SAMD1Q6SPF0 538 aaPredicted RBP8.44□□□□□ -1.06
CNKSR3-201ENST00000424998 ATF5Q9Y2D1 282 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-201ENST00000424998 ABCC9O60706 1549 aa8.34□□□□□ -1.08
CNKSR3-201ENST00000424998 APLP2Q06481 763 aa8.33□□□□□ -1.08
CNKSR3-201ENST00000424998 RNF39Q9H2S5 420 aa8.27□□□□□ -1.09
CNKSR3-201ENST00000424998 TRHP20396 242 aaPredicted RBP8.24□□□□□ -1.09
CNKSR3-201ENST00000424998 ZNF219Q9P2Y4 722 aaPredicted RBP8.23□□□□□ -1.09
CNKSR3-201ENST00000424998 CAPN15O75808 1086 aa8.22□□□□□ -1.09
CNKSR3-201ENST00000424998 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
CNKSR3-201ENST00000424998 C1QBPQ07021 282 aaKnown RBP8.19□□□□□ -1.1
CNKSR3-201ENST00000424998 FKBP8Q14318 412 aa8.19□□□□□ -1.1
CNKSR3-201ENST00000424998 POLA2Q14181 598 aa8.11□□□□□ -1.11
CNKSR3-201ENST00000424998 ABCB7O75027 752 aa8.09□□□□□ -1.11
CNKSR3-201ENST00000424998 FBLN2P98095 1184 aa8.05□□□□□ -1.12
CNKSR3-201ENST00000424998 CACNB1Q02641 598 aaPredicted RBP8□□□□□ -1.13
CNKSR3-201ENST00000424998 MKRN4PQ13434 485 aaPredicted RBP8□□□□□ -1.13
CNKSR3-201ENST00000424998 SPDYE4A6NLX3 237 aa7.97□□□□□ -1.13
CNKSR3-201ENST00000424998 ZBTB12Q9Y330 459 aaPredicted RBP7.96□□□□□ -1.14
CNKSR3-201ENST00000424998 DSG3P32926 999 aa7.95□□□□□ -1.14
CNKSR3-201ENST00000424998 CCDC180Q9P1Z9 1646 aa7.85□□□□□ -1.15
CNKSR3-201ENST00000424998 OSCARQ8IYS5 282 aa7.83□□□□□ -1.16
CNKSR3-201ENST00000424998 FBXO3Q9UK99 471 aa7.82□□□□□ -1.16
CNKSR3-201ENST00000424998 ZNF692Q9BU19 519 aaPredicted RBP7.81□□□□□ -1.16
CNKSR3-201ENST00000424998 AMER1Q5JTC6 1135 aaPredicted RBP7.78□□□□□ -1.16
CNKSR3-201ENST00000424998 RTN4Q9NQC3 1192 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-201ENST00000424998 SPDYE2BA6NHP3 402 aa7.75□□□□□ -1.17
CNKSR3-201ENST00000424998 SPDYE6P0CI01 402 aa7.75□□□□□ -1.17
CNKSR3-201ENST00000424998 SPDYE2Q495Y8 402 aa7.75□□□□□ -1.17
CNKSR3-201ENST00000424998 PROM2Q8N271 834 aa7.75□□□□□ -1.17
CNKSR3-201ENST00000424998 PABPN1Q86U42 306 aaKnown RBP eCLIP7.73□□□□□ -1.17
CNKSR3-201ENST00000424998 VASPP50552 380 aaPredicted RBP7.69□□□□□ -1.18
CNKSR3-201ENST00000424998 SSUH2Q9Y2M2 353 aa7.68□□□□□ -1.18
CNKSR3-201ENST00000424998 RB1CC1Q8TDY2 1594 aa7.66□□□□□ -1.18
CNKSR3-201ENST00000424998 DNAJC5Q9H3Z4 198 aa7.63□□□□□ -1.19
CNKSR3-201ENST00000424998 KLHL34Q8N239 644 aa7.6□□□□□ -1.19
CNKSR3-201ENST00000424998 RBM42Q9BTD8 480 aaKnown RBP7.6□□□□□ -1.19
CNKSR3-201ENST00000424998 STAG3Q9UJ98 1225 aa7.6□□□□□ -1.19
CNKSR3-201ENST00000424998 IFNLR1Q8IU57 520 aaPredicted RBP7.59□□□□□ -1.19
CNKSR3-201ENST00000424998 PLCD3Q8N3E9 789 aa7.59□□□□□ -1.19
CNKSR3-201ENST00000424998 MIER1Q8N108 512 aa7.57□□□□□ -1.2
CNKSR3-201ENST00000424998 UNC13AQ9UPW8 1703 aa7.57□□□□□ -1.2
CNKSR3-201ENST00000424998 BICRAQ9NZM4 1560 aa7.54□□□□□ -1.2
CNKSR3-201ENST00000424998 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
CNKSR3-201ENST00000424998 AKT1S1Q96B36 256 aa7.53□□□□□ -1.2
CNKSR3-201ENST00000424998 CLEC11AQ9Y240 323 aa7.53□□□□□ -1.2
CNKSR3-201ENST00000424998 DCAF8L2P0C7V8 631 aa7.52□□□□□ -1.21
CNKSR3-201ENST00000424998 SPDYE1Q8NFV5 336 aaPredicted RBP7.5□□□□□ -1.21
CNKSR3-201ENST00000424998 NACADO15069 1562 aa7.5□□□□□ -1.21
CNKSR3-201ENST00000424998 CECR2Q9BXF3 1484 aa7.49□□□□□ -1.21
CNKSR3-201ENST00000424998 SPOCK2Q92563 424 aa7.49□□□□□ -1.21
CNKSR3-201ENST00000424998 REM2Q8IYK8 340 aaPredicted RBP7.47□□□□□ -1.21
CNKSR3-201ENST00000424998 CC2D2AQ9P2K1 1620 aa7.47□□□□□ -1.21
CNKSR3-201ENST00000424998 PRR29P0C7W0 189 aa7.45□□□□□ -1.22
CNKSR3-201ENST00000424998 ZBTB47Q9UFB7 747 aaPredicted RBP7.45□□□□□ -1.22
CNKSR3-201ENST00000424998 CIZ1Q9ULV3 898 aaPredicted RBP7.41□□□□□ -1.22
CNKSR3-201ENST00000424998 PKD2Q13563 968 aa7.4□□□□□ -1.22
CNKSR3-201ENST00000424998 PITPNM1O00562 1244 aa7.39□□□□□ -1.23
CNKSR3-201ENST00000424998 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
CNKSR3-201ENST00000424998 SLC24A1O60721 1099 aa7.36□□□□□ -1.23
CNKSR3-201ENST00000424998 EIF4G1Q04637 1599 aaKnown RBP7.36□□□□□ -1.23
CNKSR3-201ENST00000424998 CREBZFQ9NS37 354 aa7.34□□□□□ -1.23
CNKSR3-201ENST00000424998 DCAF8Q5TAQ9 597 aa7.32□□□□□ -1.24
CNKSR3-201ENST00000424998 CHADLQ6NUI6 762 aa7.3□□□□□ -1.24
CNKSR3-201ENST00000424998 GSE1Q14687 1217 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms