RNA–Protein interactions for RNA: ENST00000420513.1

NBPF1-202, Transcript of NBPF member 1, humanhuman

TSL 3

Gene NBPF1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-202ENST00000420513 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
NBPF1-202ENST00000420513 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
NBPF1-202ENST00000420513 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
NBPF1-202ENST00000420513 PHF23Q9BUL5 403 aaPredicted RBP26.16■■□□□ 1.78
NBPF1-202ENST00000420513 FOXD1Q16676 465 aa24.6■■□□□ 1.53
NBPF1-202ENST00000420513 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
NBPF1-202ENST00000420513 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
NBPF1-202ENST00000420513 ADRA2BP18089 450 aa23.2■■□□□ 1.3
NBPF1-202ENST00000420513 PIAS4Q8N2W9 510 aaPredicted RBP23.11■■□□□ 1.29
NBPF1-202ENST00000420513 MSH5O43196 834 aa22.92■■□□□ 1.26
NBPF1-202ENST00000420513 POTEDQ86YR6 584 aa21.9■■□□□ 1.1
NBPF1-202ENST00000420513 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
NBPF1-202ENST00000420513 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
NBPF1-202ENST00000420513 PPP4R3CPQ6ZMV5 832 aa21.01■□□□□ 0.95
NBPF1-202ENST00000420513 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
NBPF1-202ENST00000420513 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
NBPF1-202ENST00000420513 HOXD11P31277 338 aaPredicted RBP20.3■□□□□ 0.84
NBPF1-202ENST00000420513 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
NBPF1-202ENST00000420513 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
NBPF1-202ENST00000420513 RNF216Q9NWF9 866 aaPredicted RBP20.25■□□□□ 0.83
NBPF1-202ENST00000420513 NPM3O75607 178 aaKnown RBP19.97■□□□□ 0.79
NBPF1-202ENST00000420513 KCNA4P22459 653 aa19.86■□□□□ 0.77
NBPF1-202ENST00000420513 CACNB1Q02641 598 aaPredicted RBP19.57■□□□□ 0.72
NBPF1-202ENST00000420513 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
NBPF1-202ENST00000420513 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
NBPF1-202ENST00000420513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.46■□□□□ 0.711e-8■■□□□ 13.1
NBPF1-202ENST00000420513 C1QBPQ07021 282 aaKnown RBP19.31■□□□□ 0.68
NBPF1-202ENST00000420513 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
NBPF1-202ENST00000420513 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
NBPF1-202ENST00000420513 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.6
NBPF1-202ENST00000420513 CAPN15O75808 1086 aa18.69■□□□□ 0.58
NBPF1-202ENST00000420513 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
NBPF1-202ENST00000420513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
NBPF1-202ENST00000420513 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
NBPF1-202ENST00000420513 APLP2Q06481 763 aa18.55■□□□□ 0.56
NBPF1-202ENST00000420513 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
NBPF1-202ENST00000420513 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
NBPF1-202ENST00000420513 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
NBPF1-202ENST00000420513 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
NBPF1-202ENST00000420513 DSG3P32926 999 aa18.43■□□□□ 0.54
NBPF1-202ENST00000420513 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
NBPF1-202ENST00000420513 ABCB7O75027 752 aa18.28■□□□□ 0.52
NBPF1-202ENST00000420513 ZBTB22O15209 634 aa18.22■□□□□ 0.51
NBPF1-202ENST00000420513 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
NBPF1-202ENST00000420513 POLA2Q14181 598 aa18■□□□□ 0.47
NBPF1-202ENST00000420513 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
NBPF1-202ENST00000420513 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
NBPF1-202ENST00000420513 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
NBPF1-202ENST00000420513 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
NBPF1-202ENST00000420513 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
NBPF1-202ENST00000420513 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
NBPF1-202ENST00000420513 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
NBPF1-202ENST00000420513 FBLN2P98095 1184 aa17.35■□□□□ 0.37
NBPF1-202ENST00000420513 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
NBPF1-202ENST00000420513 POTEHQ6S545 545 aa17.24■□□□□ 0.35
NBPF1-202ENST00000420513 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
NBPF1-202ENST00000420513 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
NBPF1-202ENST00000420513 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
NBPF1-202ENST00000420513 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
NBPF1-202ENST00000420513 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
NBPF1-202ENST00000420513 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
NBPF1-202ENST00000420513 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
NBPF1-202ENST00000420513 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
NBPF1-202ENST00000420513 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
NBPF1-202ENST00000420513 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
NBPF1-202ENST00000420513 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
NBPF1-202ENST00000420513 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
NBPF1-202ENST00000420513 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
NBPF1-202ENST00000420513 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
NBPF1-202ENST00000420513 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
NBPF1-202ENST00000420513 ABCC9O60706 1549 aa16.57■□□□□ 0.24
NBPF1-202ENST00000420513 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
NBPF1-202ENST00000420513 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
NBPF1-202ENST00000420513 HAX1O00165 279 aa16.45■□□□□ 0.22
NBPF1-202ENST00000420513 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
NBPF1-202ENST00000420513 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
NBPF1-202ENST00000420513 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
NBPF1-202ENST00000420513 EVX2Q03828 476 aa16.19■□□□□ 0.18
NBPF1-202ENST00000420513 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
NBPF1-202ENST00000420513 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
NBPF1-202ENST00000420513 C19orf67A6NJJ6 358 aa16.13■□□□□ 0.17
NBPF1-202ENST00000420513 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
NBPF1-202ENST00000420513 PROM2Q8N271 834 aa16.09■□□□□ 0.17
NBPF1-202ENST00000420513 FKBP8Q14318 412 aa16.07■□□□□ 0.16
NBPF1-202ENST00000420513 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
NBPF1-202ENST00000420513 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
NBPF1-202ENST00000420513 GABBR2O75899 941 aa15.86■□□□□ 0.13
NBPF1-202ENST00000420513 MIER1Q8N108 512 aa15.83■□□□□ 0.12
NBPF1-202ENST00000420513 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
NBPF1-202ENST00000420513 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
NBPF1-202ENST00000420513 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
NBPF1-202ENST00000420513 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
NBPF1-202ENST00000420513 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
NBPF1-202ENST00000420513 ZNF579Q8NAF0 562 aaKnown RBP15.71■□□□□ 0.11
NBPF1-202ENST00000420513 CLCN6P51797 869 aa15.66■□□□□ 0.1
NBPF1-202ENST00000420513 PHF12Q96QT6 1004 aa15.63■□□□□ 0.09
NBPF1-202ENST00000420513 TSPYL2Q9H2G4 693 aaPredicted RBP15.63■□□□□ 0.09
NBPF1-202ENST00000420513 FBXO3Q9UK99 471 aa15.63■□□□□ 0.09
NBPF1-202ENST00000420513 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.09
NBPF1-202ENST00000420513 DCBLD2Q96PD2 775 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms