RNA–Protein interactions for RNA: ENST00000414509.5

SATB1-202, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-202ENST00000414509 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
SATB1-202ENST00000414509 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
SATB1-202ENST00000414509 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
SATB1-202ENST00000414509 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
SATB1-202ENST00000414509 FOXD1Q16676 465 aa15.94■□□□□ 0.14
SATB1-202ENST00000414509 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
SATB1-202ENST00000414509 MSH5O43196 834 aa15.01□□□□□ -0.01
SATB1-202ENST00000414509 PIAS4Q8N2W9 510 aaPredicted RBP14.78□□□□□ -0.04
SATB1-202ENST00000414509 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
SATB1-202ENST00000414509 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
SATB1-202ENST00000414509 ADRA2BP18089 450 aa14.57□□□□□ -0.08
SATB1-202ENST00000414509 NISCHQ9Y2I1 1504 aa14.04□□□□□ -0.16
SATB1-202ENST00000414509 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
SATB1-202ENST00000414509 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
SATB1-202ENST00000414509 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
SATB1-202ENST00000414509 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
SATB1-202ENST00000414509 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
SATB1-202ENST00000414509 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
SATB1-202ENST00000414509 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
SATB1-202ENST00000414509 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
SATB1-202ENST00000414509 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
SATB1-202ENST00000414509 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
SATB1-202ENST00000414509 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
SATB1-202ENST00000414509 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
SATB1-202ENST00000414509 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
SATB1-202ENST00000414509 KCNA4P22459 653 aa12.28□□□□□ -0.44
SATB1-202ENST00000414509 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
SATB1-202ENST00000414509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
SATB1-202ENST00000414509 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
SATB1-202ENST00000414509 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
SATB1-202ENST00000414509 ABCC9O60706 1549 aa11.92□□□□□ -0.5
SATB1-202ENST00000414509 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
SATB1-202ENST00000414509 DSG3P32926 999 aa11.87□□□□□ -0.51
SATB1-202ENST00000414509 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
SATB1-202ENST00000414509 POTEHQ6S545 545 aa11.86□□□□□ -0.51
SATB1-202ENST00000414509 CAPN15O75808 1086 aa11.82□□□□□ -0.52
SATB1-202ENST00000414509 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
SATB1-202ENST00000414509 ZCCHC6Q5VYS8 1495 aaKnown RBP11.72□□□□□ -0.53
SATB1-202ENST00000414509 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.53
SATB1-202ENST00000414509 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
SATB1-202ENST00000414509 NACADO15069 1562 aa11.67□□□□□ -0.54
SATB1-202ENST00000414509 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
SATB1-202ENST00000414509 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
SATB1-202ENST00000414509 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
SATB1-202ENST00000414509 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
SATB1-202ENST00000414509 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
SATB1-202ENST00000414509 ABCB7O75027 752 aa11.55□□□□□ -0.56
SATB1-202ENST00000414509 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
SATB1-202ENST00000414509 APLP2Q06481 763 aa11.5□□□□□ -0.57
SATB1-202ENST00000414509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
SATB1-202ENST00000414509 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
SATB1-202ENST00000414509 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
SATB1-202ENST00000414509 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
SATB1-202ENST00000414509 ZBTB22O15209 634 aa11.34□□□□□ -0.59
SATB1-202ENST00000414509 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
SATB1-202ENST00000414509 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
SATB1-202ENST00000414509 SCRIBQ14160 1630 aa11.26□□□□□ -0.61
SATB1-202ENST00000414509 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
SATB1-202ENST00000414509 BICRAQ9NZM4 1560 aa11.23□□□□□ -0.61
SATB1-202ENST00000414509 POLA2Q14181 598 aa11.2□□□□□ -0.62
SATB1-202ENST00000414509 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
SATB1-202ENST00000414509 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
SATB1-202ENST00000414509 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
SATB1-202ENST00000414509 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
SATB1-202ENST00000414509 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
SATB1-202ENST00000414509 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
SATB1-202ENST00000414509 SP7Q8TDD2 431 aaPredicted RBP10.96□□□□□ -0.65
SATB1-202ENST00000414509 EIF4G1Q04637 1599 aaKnown RBP10.93□□□□□ -0.66
SATB1-202ENST00000414509 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
SATB1-202ENST00000414509 REM2Q8IYK8 340 aaPredicted RBP10.89□□□□□ -0.67
SATB1-202ENST00000414509 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
SATB1-202ENST00000414509 BAZ1AQ9NRL2 1556 aaPredicted RBP10.88□□□□□ -0.67
SATB1-202ENST00000414509 OSCARQ8IYS5 282 aa10.86□□□□□ -0.67
SATB1-202ENST00000414509 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
SATB1-202ENST00000414509 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
SATB1-202ENST00000414509 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
SATB1-202ENST00000414509 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
SATB1-202ENST00000414509 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
SATB1-202ENST00000414509 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
SATB1-202ENST00000414509 SMARCA2P51531 1590 aa10.77□□□□□ -0.68
SATB1-202ENST00000414509 MROH2BQ7Z745 1585 aa10.77□□□□□ -0.68
SATB1-202ENST00000414509 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
SATB1-202ENST00000414509 FXR2P51116 673 aaKnown RBP eCLIP10.77□□□□□ -0.69
SATB1-202ENST00000414509 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
SATB1-202ENST00000414509 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
SATB1-202ENST00000414509 HAX1O00165 279 aa10.73□□□□□ -0.69
SATB1-202ENST00000414509 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
SATB1-202ENST00000414509 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
SATB1-202ENST00000414509 WIZO95785 1651 aa10.65□□□□□ -0.7
SATB1-202ENST00000414509 EVX2Q03828 476 aa10.64□□□□□ -0.71
SATB1-202ENST00000414509 TOP2AP11388 1531 aaKnown RBP10.6□□□□□ -0.71
SATB1-202ENST00000414509 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
SATB1-202ENST00000414509 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
SATB1-202ENST00000414509 SPDYE2Q495Y8 402 aa10.56□□□□□ -0.72
SATB1-202ENST00000414509 FBLN2P98095 1184 aa10.5□□□□□ -0.73
SATB1-202ENST00000414509 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
SATB1-202ENST00000414509 PRKAR2AP13861 404 aaKnown RBP10.49□□□□□ -0.73
SATB1-202ENST00000414509 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
SATB1-202ENST00000414509 CCDC88BA6NC98 1476 aa10.46□□□□□ -0.74
SATB1-202ENST00000414509 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms