RNA–Protein interactions for RNA: ENST00000409648.8

SLC35E1-201, Transcript of solute carrier family 35 member E1, humanhuman

TSL 2

Gene SLC35E1, Length 3,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35E1-201ENST00000409648 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
SLC35E1-201ENST00000409648 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
SLC35E1-201ENST00000409648 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
SLC35E1-201ENST00000409648 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
SLC35E1-201ENST00000409648 PLPPR3Q6T4P5 718 aa13.57□□□□□ -0.24
SLC35E1-201ENST00000409648 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
SLC35E1-201ENST00000409648 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
SLC35E1-201ENST00000409648 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
SLC35E1-201ENST00000409648 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
SLC35E1-201ENST00000409648 CCDC180Q9P1Z9 1646 aa13.2□□□□□ -0.3
SLC35E1-201ENST00000409648 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
SLC35E1-201ENST00000409648 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
SLC35E1-201ENST00000409648 HRCP23327 699 aa13.11□□□□□ -0.31
SLC35E1-201ENST00000409648 ZCCHC6Q5VYS8 1495 aaKnown RBP13.03□□□□□ -0.32
SLC35E1-201ENST00000409648 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.34
SLC35E1-201ENST00000409648 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.34
SLC35E1-201ENST00000409648 MYO15BQ96JP2 1530 aa12.95□□□□□ -0.34
SLC35E1-201ENST00000409648 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
SLC35E1-201ENST00000409648 MYT1Q01538 1121 aa12.92□□□□□ -0.34
SLC35E1-201ENST00000409648 KCNA4P22459 653 aa12.87□□□□□ -0.35
SLC35E1-201ENST00000409648 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
SLC35E1-201ENST00000409648 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
SLC35E1-201ENST00000409648 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
SLC35E1-201ENST00000409648 PCGF6Q9BYE7 350 aa12.77□□□□□ -0.36
SLC35E1-201ENST00000409648 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
SLC35E1-201ENST00000409648 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
SLC35E1-201ENST00000409648 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
SLC35E1-201ENST00000409648 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
SLC35E1-201ENST00000409648 ABCC9O60706 1549 aa12.49□□□□□ -0.41
SLC35E1-201ENST00000409648 LOC105371045A0A1W2PR82 267 aa12.45□□□□□ -0.42
SLC35E1-201ENST00000409648 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
SLC35E1-201ENST00000409648 ERICH6Q7L0X2 663 aa12.41□□□□□ -0.42
SLC35E1-201ENST00000409648 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
SLC35E1-201ENST00000409648 ARXQ96QS3 562 aa12.35□□□□□ -0.43
SLC35E1-201ENST00000409648 TTBK1Q5TCY1 1321 aaPredicted RBP12.35□□□□□ -0.43
SLC35E1-201ENST00000409648 APLP2Q06481 763 aa12.33□□□□□ -0.44
SLC35E1-201ENST00000409648 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
SLC35E1-201ENST00000409648 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
SLC35E1-201ENST00000409648 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
SLC35E1-201ENST00000409648 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
SLC35E1-201ENST00000409648 ACIN1Q9UKV3 1341 aaKnown RBP12.2□□□□□ -0.46
SLC35E1-201ENST00000409648 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
SLC35E1-201ENST00000409648 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
SLC35E1-201ENST00000409648 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
SLC35E1-201ENST00000409648 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
SLC35E1-201ENST00000409648 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
SLC35E1-201ENST00000409648 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
SLC35E1-201ENST00000409648 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
SLC35E1-201ENST00000409648 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
SLC35E1-201ENST00000409648 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
SLC35E1-201ENST00000409648 BCANQ96GW7 911 aa12.11□□□□□ -0.47
SLC35E1-201ENST00000409648 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
SLC35E1-201ENST00000409648 FAM9AQ8IZU1 332 aaPredicted RBP12.09□□□□□ -0.47
SLC35E1-201ENST00000409648 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
SLC35E1-201ENST00000409648 NACADO15069 1562 aa12.06□□□□□ -0.48
SLC35E1-201ENST00000409648 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
SLC35E1-201ENST00000409648 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
SLC35E1-201ENST00000409648 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
SLC35E1-201ENST00000409648 TRIM41Q8WV44 630 aa12□□□□□ -0.49
SLC35E1-201ENST00000409648 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
SLC35E1-201ENST00000409648 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
SLC35E1-201ENST00000409648 CECR2Q9BXF3 1484 aa11.91□□□□□ -0.5
SLC35E1-201ENST00000409648 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
SLC35E1-201ENST00000409648 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
SLC35E1-201ENST00000409648 WIZO95785 1651 aa11.91□□□□□ -0.5
SLC35E1-201ENST00000409648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
SLC35E1-201ENST00000409648 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
SLC35E1-201ENST00000409648 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
SLC35E1-201ENST00000409648 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
SLC35E1-201ENST00000409648 CCER1Q8TC90 406 aaPredicted RBP11.82□□□□□ -0.52
SLC35E1-201ENST00000409648 ANP32EQ9BTT0 268 aa11.79□□□□□ -0.52
SLC35E1-201ENST00000409648 ADRA2BP18089 450 aa11.76□□□□□ -0.53
SLC35E1-201ENST00000409648 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
SLC35E1-201ENST00000409648 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
SLC35E1-201ENST00000409648 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.54
SLC35E1-201ENST00000409648 ZBTB22O15209 634 aa11.71□□□□□ -0.54
SLC35E1-201ENST00000409648 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
SLC35E1-201ENST00000409648 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
SLC35E1-201ENST00000409648 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
SLC35E1-201ENST00000409648 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
SLC35E1-201ENST00000409648 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
SLC35E1-201ENST00000409648 FKBP8Q14318 412 aa11.62□□□□□ -0.55
SLC35E1-201ENST00000409648 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
SLC35E1-201ENST00000409648 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
SLC35E1-201ENST00000409648 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
SLC35E1-201ENST00000409648 UBTFP17480 764 aaKnown RBP11.58□□□□□ -0.56
SLC35E1-201ENST00000409648 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
SLC35E1-201ENST00000409648 TMEM132AQ24JP5 1023 aa11.56□□□□□ -0.56
SLC35E1-201ENST00000409648 MIER1Q8N108 512 aa11.55□□□□□ -0.56
SLC35E1-201ENST00000409648 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
SLC35E1-201ENST00000409648 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
SLC35E1-201ENST00000409648 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.56
SLC35E1-201ENST00000409648 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SLC35E1-201ENST00000409648 FBLN2P98095 1184 aa11.47□□□□□ -0.57
SLC35E1-201ENST00000409648 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
SLC35E1-201ENST00000409648 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
SLC35E1-201ENST00000409648 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
SLC35E1-201ENST00000409648 EEA1Q15075 1411 aa11.41□□□□□ -0.58
SLC35E1-201ENST00000409648 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
SLC35E1-201ENST00000409648 SYNJ1O43426 1573 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms