RNA–Protein interactions for RNA: ENST00000400430.6

LINC00598-201, long intergenic non-protein coding RNA 598, humanhuman

TSL 2

Gene LINC00598, Length 702 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-201ENST00000400430 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
LINC00598-201ENST00000400430 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
LINC00598-201ENST00000400430 PHF23Q9BUL5 403 aaPredicted RBP12.91□□□□□ -0.34
LINC00598-201ENST00000400430 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
LINC00598-201ENST00000400430 PLPPR3Q6T4P5 718 aa11.91□□□□□ -0.5
LINC00598-201ENST00000400430 FOXD1Q16676 465 aa11.81□□□□□ -0.52
LINC00598-201ENST00000400430 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
LINC00598-201ENST00000400430 ADRA2BP18089 450 aa11.32□□□□□ -0.6
LINC00598-201ENST00000400430 PIAS4Q8N2W9 510 aaPredicted RBP11.11□□□□□ -0.63
LINC00598-201ENST00000400430 MSH5O43196 834 aa10.89□□□□□ -0.67
LINC00598-201ENST00000400430 EHMT2Q96KQ7 1210 aa10.49□□□□□ -0.73
LINC00598-201ENST00000400430 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
LINC00598-201ENST00000400430 PPP4R3CPQ6ZMV5 832 aa10.48□□□□□ -0.73
LINC00598-201ENST00000400430 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
LINC00598-201ENST00000400430 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
LINC00598-201ENST00000400430 KCNA4P22459 653 aa10.25□□□□□ -0.77
LINC00598-201ENST00000400430 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
LINC00598-201ENST00000400430 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
LINC00598-201ENST00000400430 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
LINC00598-201ENST00000400430 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
LINC00598-201ENST00000400430 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
LINC00598-201ENST00000400430 RNF216Q9NWF9 866 aaPredicted RBP10.01□□□□□ -0.81
LINC00598-201ENST00000400430 NISCHQ9Y2I1 1504 aa10□□□□□ -0.81
LINC00598-201ENST00000400430 HOXD11P31277 338 aaPredicted RBP9.99□□□□□ -0.81
LINC00598-201ENST00000400430 DNAJC5BQ9UF47 199 aa9.89□□□□□ -0.83
LINC00598-201ENST00000400430 POTEDQ86YR6 584 aa9.88□□□□□ -0.83
LINC00598-201ENST00000400430 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
LINC00598-201ENST00000400430 ABCC9O60706 1549 aa9.79□□□□□ -0.84
LINC00598-201ENST00000400430 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
LINC00598-201ENST00000400430 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
LINC00598-201ENST00000400430 DCAF8L1A6NGE4 600 aa9.6□□□□□ -0.87
LINC00598-201ENST00000400430 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
LINC00598-201ENST00000400430 ZBTB22O15209 634 aa9.46□□□□□ -0.9
LINC00598-201ENST00000400430 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
LINC00598-201ENST00000400430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC00598-201ENST00000400430 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
LINC00598-201ENST00000400430 RNF39Q9H2S5 420 aa9.34□□□□□ -0.91
LINC00598-201ENST00000400430 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
LINC00598-201ENST00000400430 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
LINC00598-201ENST00000400430 CCDC180Q9P1Z9 1646 aa9.25□□□□□ -0.93
LINC00598-201ENST00000400430 C1QBPQ07021 282 aaKnown RBP9.22□□□□□ -0.93
LINC00598-201ENST00000400430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.2□□□□□ -0.94
LINC00598-201ENST00000400430 HNRNPUL2Q1KMD3 747 aaKnown RBP9.2□□□□□ -0.94
LINC00598-201ENST00000400430 SAMD1Q6SPF0 538 aaPredicted RBP9.17□□□□□ -0.94
LINC00598-201ENST00000400430 ATXN8OSP0DMR3 200 aa9.14□□□□□ -0.95
LINC00598-201ENST00000400430 PRKCSHP14314 528 aaPredicted RBP9.13□□□□□ -0.95
LINC00598-201ENST00000400430 APLP2Q06481 763 aa9.1□□□□□ -0.95
LINC00598-201ENST00000400430 DAXXQ9UER7 740 aaPredicted RBP9.1□□□□□ -0.95
LINC00598-201ENST00000400430 RB1CC1Q8TDY2 1594 aa9.07□□□□□ -0.96
LINC00598-201ENST00000400430 ATF5Q9Y2D1 282 aaPredicted RBP9.05□□□□□ -0.96
LINC00598-201ENST00000400430 SPINK5Q9NQ38 1064 aaPredicted RBP9.04□□□□□ -0.96
LINC00598-201ENST00000400430 CACNB1Q02641 598 aaPredicted RBP9.01□□□□□ -0.97
LINC00598-201ENST00000400430 TAOK2Q9UL54 1235 aa8.99□□□□□ -0.97
LINC00598-201ENST00000400430 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
LINC00598-201ENST00000400430 PABPN1Q86U42 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
LINC00598-201ENST00000400430 ZNF219Q9P2Y4 722 aaPredicted RBP8.98□□□□□ -0.97
LINC00598-201ENST00000400430 CAPN15O75808 1086 aa8.96□□□□□ -0.98
LINC00598-201ENST00000400430 BCANQ96GW7 911 aa8.95□□□□□ -0.98
LINC00598-201ENST00000400430 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
LINC00598-201ENST00000400430 FKBP8Q14318 412 aa8.91□□□□□ -0.98
LINC00598-201ENST00000400430 CECR2Q9BXF3 1484 aa8.89□□□□□ -0.99
LINC00598-201ENST00000400430 UNC13AQ9UPW8 1703 aa8.89□□□□□ -0.99
LINC00598-201ENST00000400430 BICRAQ9NZM4 1560 aa8.89□□□□□ -0.99
LINC00598-201ENST00000400430 DSG3P32926 999 aa8.88□□□□□ -0.99
LINC00598-201ENST00000400430 NACADO15069 1562 aa8.87□□□□□ -0.99
LINC00598-201ENST00000400430 ARXQ96QS3 562 aa8.85□□□□□ -0.99
LINC00598-201ENST00000400430 CC2D2AQ9P2K1 1620 aa8.84□□□□□ -0.99
LINC00598-201ENST00000400430 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
LINC00598-201ENST00000400430 POLA2Q14181 598 aa8.81□□□□□ -1
LINC00598-201ENST00000400430 ABCB7O75027 752 aa8.8□□□□□ -1
LINC00598-201ENST00000400430 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
LINC00598-201ENST00000400430 HAP1P54257 671 aaPredicted RBP8.78□□□□□ -1
LINC00598-201ENST00000400430 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
LINC00598-201ENST00000400430 CUX2O14529 1486 aa8.71□□□□□ -1.01
LINC00598-201ENST00000400430 TULP1O00294 542 aaPredicted RBP8.7□□□□□ -1.02
LINC00598-201ENST00000400430 ZBTB12Q9Y330 459 aaPredicted RBP8.7□□□□□ -1.02
LINC00598-201ENST00000400430 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
LINC00598-201ENST00000400430 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
LINC00598-201ENST00000400430 MKRN4PQ13434 485 aaPredicted RBP8.68□□□□□ -1.02
LINC00598-201ENST00000400430 FBLN2P98095 1184 aa8.64□□□□□ -1.03
LINC00598-201ENST00000400430 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
LINC00598-201ENST00000400430 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
LINC00598-201ENST00000400430 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
LINC00598-201ENST00000400430 GTF3C3Q9Y5Q9 886 aa8.57□□□□□ -1.04
LINC00598-201ENST00000400430 HOMEZQ8IX15 550 aa8.55□□□□□ -1.04
LINC00598-201ENST00000400430 DCAF8L2P0C7V8 631 aa8.53□□□□□ -1.04
LINC00598-201ENST00000400430 OSCARQ8IYS5 282 aa8.53□□□□□ -1.04
LINC00598-201ENST00000400430 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
LINC00598-201ENST00000400430 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
LINC00598-201ENST00000400430 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
LINC00598-201ENST00000400430 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
LINC00598-201ENST00000400430 ERCC6Q03468 1493 aa8.46□□□□□ -1.05
LINC00598-201ENST00000400430 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
LINC00598-201ENST00000400430 SPDYE4A6NLX3 237 aa8.44□□□□□ -1.06
LINC00598-201ENST00000400430 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
LINC00598-201ENST00000400430 TMEM132AQ24JP5 1023 aa8.42□□□□□ -1.06
LINC00598-201ENST00000400430 PROM2Q8N271 834 aa8.41□□□□□ -1.06
LINC00598-201ENST00000400430 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
LINC00598-201ENST00000400430 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
LINC00598-201ENST00000400430 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms