RNA–Protein interactions for RNA: ENST00000396644.6

HMGN2P46-202, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,059 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-202ENST00000396644 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
HMGN2P46-202ENST00000396644 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
HMGN2P46-202ENST00000396644 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
HMGN2P46-202ENST00000396644 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
HMGN2P46-202ENST00000396644 FOXD1Q16676 465 aa18.76■□□□□ 0.59
HMGN2P46-202ENST00000396644 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
HMGN2P46-202ENST00000396644 MSH5O43196 834 aa17.81■□□□□ 0.44
HMGN2P46-202ENST00000396644 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
HMGN2P46-202ENST00000396644 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
HMGN2P46-202ENST00000396644 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
HMGN2P46-202ENST00000396644 ADRA2BP18089 450 aa16.83■□□□□ 0.28
HMGN2P46-202ENST00000396644 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
HMGN2P46-202ENST00000396644 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
HMGN2P46-202ENST00000396644 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
HMGN2P46-202ENST00000396644 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
HMGN2P46-202ENST00000396644 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
HMGN2P46-202ENST00000396644 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
HMGN2P46-202ENST00000396644 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
HMGN2P46-202ENST00000396644 KCNA4P22459 653 aa14.97□□□□□ -0.01
HMGN2P46-202ENST00000396644 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
HMGN2P46-202ENST00000396644 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
HMGN2P46-202ENST00000396644 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
HMGN2P46-202ENST00000396644 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
HMGN2P46-202ENST00000396644 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
HMGN2P46-202ENST00000396644 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
HMGN2P46-202ENST00000396644 POTEHQ6S545 545 aa14.51□□□□□ -0.09
HMGN2P46-202ENST00000396644 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
HMGN2P46-202ENST00000396644 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
HMGN2P46-202ENST00000396644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
HMGN2P46-202ENST00000396644 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
HMGN2P46-202ENST00000396644 DSG3P32926 999 aa13.93□□□□□ -0.18
HMGN2P46-202ENST00000396644 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
HMGN2P46-202ENST00000396644 ZBTB22O15209 634 aa13.8□□□□□ -0.2
HMGN2P46-202ENST00000396644 CAPN15O75808 1086 aa13.8□□□□□ -0.2
HMGN2P46-202ENST00000396644 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
HMGN2P46-202ENST00000396644 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
HMGN2P46-202ENST00000396644 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
HMGN2P46-202ENST00000396644 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
HMGN2P46-202ENST00000396644 ABCB7O75027 752 aa13.44□□□□□ -0.26
HMGN2P46-202ENST00000396644 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
HMGN2P46-202ENST00000396644 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
HMGN2P46-202ENST00000396644 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
HMGN2P46-202ENST00000396644 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
HMGN2P46-202ENST00000396644 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
HMGN2P46-202ENST00000396644 APLP2Q06481 763 aa13.25□□□□□ -0.29
HMGN2P46-202ENST00000396644 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
HMGN2P46-202ENST00000396644 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
HMGN2P46-202ENST00000396644 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
HMGN2P46-202ENST00000396644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
HMGN2P46-202ENST00000396644 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
HMGN2P46-202ENST00000396644 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
HMGN2P46-202ENST00000396644 ABCC9O60706 1549 aa13.04□□□□□ -0.32
HMGN2P46-202ENST00000396644 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
HMGN2P46-202ENST00000396644 POLA2Q14181 598 aa12.86□□□□□ -0.35
HMGN2P46-202ENST00000396644 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
HMGN2P46-202ENST00000396644 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
HMGN2P46-202ENST00000396644 HAX1O00165 279 aa12.78□□□□□ -0.36
HMGN2P46-202ENST00000396644 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
HMGN2P46-202ENST00000396644 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
HMGN2P46-202ENST00000396644 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
HMGN2P46-202ENST00000396644 EVX2Q03828 476 aa12.62□□□□□ -0.39
HMGN2P46-202ENST00000396644 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
HMGN2P46-202ENST00000396644 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
HMGN2P46-202ENST00000396644 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
HMGN2P46-202ENST00000396644 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
HMGN2P46-202ENST00000396644 FBLN2P98095 1184 aa12.49□□□□□ -0.41
HMGN2P46-202ENST00000396644 FKBP8Q14318 412 aa12.43□□□□□ -0.42
HMGN2P46-202ENST00000396644 LHX8Q68G74 356 aa12.39□□□□□ -0.43
HMGN2P46-202ENST00000396644 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
HMGN2P46-202ENST00000396644 C19orf67A6NJJ6 358 aa12.27□□□□□ -0.45
HMGN2P46-202ENST00000396644 GABBR2O75899 941 aa12.27□□□□□ -0.45
HMGN2P46-202ENST00000396644 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
HMGN2P46-202ENST00000396644 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
HMGN2P46-202ENST00000396644 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
HMGN2P46-202ENST00000396644 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
HMGN2P46-202ENST00000396644 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
HMGN2P46-202ENST00000396644 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
HMGN2P46-202ENST00000396644 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
HMGN2P46-202ENST00000396644 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
HMGN2P46-202ENST00000396644 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
HMGN2P46-202ENST00000396644 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGN2P46-202ENST00000396644 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
HMGN2P46-202ENST00000396644 PROM2Q8N271 834 aa12.04□□□□□ -0.48
HMGN2P46-202ENST00000396644 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
HMGN2P46-202ENST00000396644 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
HMGN2P46-202ENST00000396644 RB1CC1Q8TDY2 1594 aa11.94□□□□□ -0.5
HMGN2P46-202ENST00000396644 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
HMGN2P46-202ENST00000396644 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
HMGN2P46-202ENST00000396644 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
HMGN2P46-202ENST00000396644 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
HMGN2P46-202ENST00000396644 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
HMGN2P46-202ENST00000396644 CLCN6P51797 869 aa11.76□□□□□ -0.53
HMGN2P46-202ENST00000396644 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
HMGN2P46-202ENST00000396644 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
HMGN2P46-202ENST00000396644 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
HMGN2P46-202ENST00000396644 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
HMGN2P46-202ENST00000396644 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
HMGN2P46-202ENST00000396644 POTEMA6NI47 508 aa11.72□□□□□ -0.53
HMGN2P46-202ENST00000396644 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
HMGN2P46-202ENST00000396644 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms