RNA–Protein interactions for RNA: ENST00000394261.2

CNTN6-202, Transcript of contactin 6, humanhuman

TSL 1 (best)

Gene CNTN6, Length 1,433 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN6-202ENST00000394261 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
CNTN6-202ENST00000394261 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
CNTN6-202ENST00000394261 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
CNTN6-202ENST00000394261 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
CNTN6-202ENST00000394261 FOXD1Q16676 465 aa19.76■□□□□ 0.75
CNTN6-202ENST00000394261 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
CNTN6-202ENST00000394261 MSH5O43196 834 aa18.48■□□□□ 0.55
CNTN6-202ENST00000394261 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
CNTN6-202ENST00000394261 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
CNTN6-202ENST00000394261 ADRA2BP18089 450 aa18.34■□□□□ 0.53
CNTN6-202ENST00000394261 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
CNTN6-202ENST00000394261 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
CNTN6-202ENST00000394261 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CNTN6-202ENST00000394261 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
CNTN6-202ENST00000394261 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
CNTN6-202ENST00000394261 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
CNTN6-202ENST00000394261 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
CNTN6-202ENST00000394261 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
CNTN6-202ENST00000394261 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
CNTN6-202ENST00000394261 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
CNTN6-202ENST00000394261 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
CNTN6-202ENST00000394261 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
CNTN6-202ENST00000394261 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
CNTN6-202ENST00000394261 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
CNTN6-202ENST00000394261 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
CNTN6-202ENST00000394261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
CNTN6-202ENST00000394261 KCNA4P22459 653 aa15.14■□□□□ 0.01
CNTN6-202ENST00000394261 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
CNTN6-202ENST00000394261 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
CNTN6-202ENST00000394261 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
CNTN6-202ENST00000394261 CAPN15O75808 1086 aa14.81□□□□□ -0.04
CNTN6-202ENST00000394261 DSG3P32926 999 aa14.75□□□□□ -0.05
CNTN6-202ENST00000394261 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
CNTN6-202ENST00000394261 APLP2Q06481 763 aa14.54□□□□□ -0.08
CNTN6-202ENST00000394261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
CNTN6-202ENST00000394261 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
CNTN6-202ENST00000394261 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
CNTN6-202ENST00000394261 ABCB7O75027 752 aa14.48□□□□□ -0.09
CNTN6-202ENST00000394261 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
CNTN6-202ENST00000394261 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
CNTN6-202ENST00000394261 POTEHQ6S545 545 aa14.25□□□□□ -0.13
CNTN6-202ENST00000394261 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
CNTN6-202ENST00000394261 POLA2Q14181 598 aa14.15□□□□□ -0.14
CNTN6-202ENST00000394261 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
CNTN6-202ENST00000394261 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
CNTN6-202ENST00000394261 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
CNTN6-202ENST00000394261 ZBTB22O15209 634 aa13.93□□□□□ -0.18
CNTN6-202ENST00000394261 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
CNTN6-202ENST00000394261 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
CNTN6-202ENST00000394261 AKT1S1Q96B36 256 aa13.71□□□□□ -0.22
CNTN6-202ENST00000394261 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
CNTN6-202ENST00000394261 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
CNTN6-202ENST00000394261 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
CNTN6-202ENST00000394261 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
CNTN6-202ENST00000394261 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
CNTN6-202ENST00000394261 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.26
CNTN6-202ENST00000394261 FBLN2P98095 1184 aa13.45□□□□□ -0.26
CNTN6-202ENST00000394261 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
CNTN6-202ENST00000394261 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
CNTN6-202ENST00000394261 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
CNTN6-202ENST00000394261 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
CNTN6-202ENST00000394261 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNTN6-202ENST00000394261 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
CNTN6-202ENST00000394261 HAX1O00165 279 aa13.23□□□□□ -0.29
CNTN6-202ENST00000394261 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
CNTN6-202ENST00000394261 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
CNTN6-202ENST00000394261 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
CNTN6-202ENST00000394261 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
CNTN6-202ENST00000394261 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
CNTN6-202ENST00000394261 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
CNTN6-202ENST00000394261 EVX2Q03828 476 aa13.11□□□□□ -0.31
CNTN6-202ENST00000394261 ABCC9O60706 1549 aa13.07□□□□□ -0.32
CNTN6-202ENST00000394261 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
CNTN6-202ENST00000394261 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
CNTN6-202ENST00000394261 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
CNTN6-202ENST00000394261 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
CNTN6-202ENST00000394261 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
CNTN6-202ENST00000394261 GABBR2O75899 941 aa12.78□□□□□ -0.36
CNTN6-202ENST00000394261 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
CNTN6-202ENST00000394261 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
CNTN6-202ENST00000394261 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
CNTN6-202ENST00000394261 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
CNTN6-202ENST00000394261 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
CNTN6-202ENST00000394261 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
CNTN6-202ENST00000394261 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.4
CNTN6-202ENST00000394261 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
CNTN6-202ENST00000394261 LHX8Q68G74 356 aa12.5□□□□□ -0.41
CNTN6-202ENST00000394261 CLCN6P51797 869 aa12.48□□□□□ -0.41
CNTN6-202ENST00000394261 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
CNTN6-202ENST00000394261 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
CNTN6-202ENST00000394261 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
CNTN6-202ENST00000394261 DCBLD2Q96PD2 775 aa12.38□□□□□ -0.43
CNTN6-202ENST00000394261 PROM2Q8N271 834 aa12.37□□□□□ -0.43
CNTN6-202ENST00000394261 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
CNTN6-202ENST00000394261 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
CNTN6-202ENST00000394261 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
CNTN6-202ENST00000394261 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
CNTN6-202ENST00000394261 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
CNTN6-202ENST00000394261 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CNTN6-202ENST00000394261 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms