RNA–Protein interactions for RNA: ENST00000379962.3

PPEF1-203, Transcript of protein phosphatase with EF-hand domain 1, humanhuman

TSL 2

Gene PPEF1, Length 2,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPEF1-203ENST00000379962 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
PPEF1-203ENST00000379962 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
PPEF1-203ENST00000379962 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.19
PPEF1-203ENST00000379962 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
PPEF1-203ENST00000379962 FOXD1Q16676 465 aa15.13■□□□□ 0.01
PPEF1-203ENST00000379962 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
PPEF1-203ENST00000379962 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
PPEF1-203ENST00000379962 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
PPEF1-203ENST00000379962 ADRA2BP18089 450 aa14.16□□□□□ -0.14
PPEF1-203ENST00000379962 MSH5O43196 834 aa14.15□□□□□ -0.14
PPEF1-203ENST00000379962 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
PPEF1-203ENST00000379962 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
PPEF1-203ENST00000379962 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
PPEF1-203ENST00000379962 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
PPEF1-203ENST00000379962 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
PPEF1-203ENST00000379962 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
PPEF1-203ENST00000379962 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
PPEF1-203ENST00000379962 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
PPEF1-203ENST00000379962 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
PPEF1-203ENST00000379962 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
PPEF1-203ENST00000379962 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
PPEF1-203ENST00000379962 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
PPEF1-203ENST00000379962 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
PPEF1-203ENST00000379962 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
PPEF1-203ENST00000379962 KCNA4P22459 653 aa11.98□□□□□ -0.49
PPEF1-203ENST00000379962 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
PPEF1-203ENST00000379962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
PPEF1-203ENST00000379962 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
PPEF1-203ENST00000379962 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
PPEF1-203ENST00000379962 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
PPEF1-203ENST00000379962 CAPN15O75808 1086 aa11.41□□□□□ -0.58
PPEF1-203ENST00000379962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
PPEF1-203ENST00000379962 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
PPEF1-203ENST00000379962 DSG3P32926 999 aa11.33□□□□□ -0.6
PPEF1-203ENST00000379962 APLP2Q06481 763 aa11.33□□□□□ -0.6
PPEF1-203ENST00000379962 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
PPEF1-203ENST00000379962 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
PPEF1-203ENST00000379962 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
PPEF1-203ENST00000379962 MYCNP04198 464 aaPredicted RBP11.24□□□□□ -0.61
PPEF1-203ENST00000379962 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
PPEF1-203ENST00000379962 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
PPEF1-203ENST00000379962 ABCB7O75027 752 aa11.14□□□□□ -0.63
PPEF1-203ENST00000379962 ZBTB22O15209 634 aa11.02□□□□□ -0.65
PPEF1-203ENST00000379962 NISCHQ9Y2I1 1504 aa11□□□□□ -0.65
PPEF1-203ENST00000379962 POLA2Q14181 598 aa10.96□□□□□ -0.65
PPEF1-203ENST00000379962 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
PPEF1-203ENST00000379962 ATXN8OSP0DMR3 200 aa10.83□□□□□ -0.68
PPEF1-203ENST00000379962 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
PPEF1-203ENST00000379962 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
PPEF1-203ENST00000379962 POTEHQ6S545 545 aa10.71□□□□□ -0.69
PPEF1-203ENST00000379962 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
PPEF1-203ENST00000379962 CSRNP3Q8WYN3 585 aa10.59□□□□□ -0.71
PPEF1-203ENST00000379962 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
PPEF1-203ENST00000379962 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
PPEF1-203ENST00000379962 FBLN2P98095 1184 aa10.53□□□□□ -0.72
PPEF1-203ENST00000379962 EHMT2Q96KQ7 1210 aa10.48□□□□□ -0.73
PPEF1-203ENST00000379962 REM2Q8IYK8 340 aaPredicted RBP10.48□□□□□ -0.73
PPEF1-203ENST00000379962 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.74
PPEF1-203ENST00000379962 SPDYE2BA6NHP3 402 aa10.45□□□□□ -0.74
PPEF1-203ENST00000379962 SPDYE6P0CI01 402 aa10.45□□□□□ -0.74
PPEF1-203ENST00000379962 SPDYE2Q495Y8 402 aa10.45□□□□□ -0.74
PPEF1-203ENST00000379962 ABCC9O60706 1549 aa10.4□□□□□ -0.74
PPEF1-203ENST00000379962 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
PPEF1-203ENST00000379962 SSUH2Q9Y2M2 353 aa10.32□□□□□ -0.76
PPEF1-203ENST00000379962 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
PPEF1-203ENST00000379962 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
PPEF1-203ENST00000379962 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
PPEF1-203ENST00000379962 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
PPEF1-203ENST00000379962 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
PPEF1-203ENST00000379962 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
PPEF1-203ENST00000379962 PRKAR2AP13861 404 aaKnown RBP10.09□□□□□ -0.79
PPEF1-203ENST00000379962 HAX1O00165 279 aa10.09□□□□□ -0.79
PPEF1-203ENST00000379962 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
PPEF1-203ENST00000379962 PRR29P0C7W0 189 aa10.05□□□□□ -0.8
PPEF1-203ENST00000379962 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.8
PPEF1-203ENST00000379962 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
PPEF1-203ENST00000379962 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
PPEF1-203ENST00000379962 EVX2Q03828 476 aa9.96□□□□□ -0.82
PPEF1-203ENST00000379962 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
PPEF1-203ENST00000379962 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
PPEF1-203ENST00000379962 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
PPEF1-203ENST00000379962 CREBZFQ9NS37 354 aa9.82□□□□□ -0.84
PPEF1-203ENST00000379962 PROM2Q8N271 834 aa9.81□□□□□ -0.84
PPEF1-203ENST00000379962 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
PPEF1-203ENST00000379962 RB1CC1Q8TDY2 1594 aa9.77□□□□□ -0.85
PPEF1-203ENST00000379962 GABBR2O75899 941 aa9.76□□□□□ -0.85
PPEF1-203ENST00000379962 DNAJC5Q9H3Z4 198 aa9.69□□□□□ -0.86
PPEF1-203ENST00000379962 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
PPEF1-203ENST00000379962 CLCN6P51797 869 aa9.67□□□□□ -0.86
PPEF1-203ENST00000379962 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
PPEF1-203ENST00000379962 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
PPEF1-203ENST00000379962 ZRANB1Q9UGI0 708 aa9.65□□□□□ -0.86
PPEF1-203ENST00000379962 NACADO15069 1562 aa9.63□□□□□ -0.87
PPEF1-203ENST00000379962 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
PPEF1-203ENST00000379962 FKBP8Q14318 412 aa9.59□□□□□ -0.87
PPEF1-203ENST00000379962 POTEIP0CG38 1075 aa9.55□□□□□ -0.88
PPEF1-203ENST00000379962 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
PPEF1-203ENST00000379962 MIER1Q8N108 512 aa9.53□□□□□ -0.88
PPEF1-203ENST00000379962 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
PPEF1-203ENST00000379962 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms