RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 AEBP2Q6ZN18 517 aaPredicted RBP32.2■■■□□ 2.75
COL21A1-202ENST00000370817 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
COL21A1-202ENST00000370817 SENP3Q9H4L4 574 aaPredicted RBP27.38■■□□□ 1.97
COL21A1-202ENST00000370817 PHF23Q9BUL5 403 aaPredicted RBP27.07■■□□□ 1.92
COL21A1-202ENST00000370817 FOXD1Q16676 465 aa25.53■■□□□ 1.68
COL21A1-202ENST00000370817 PLPPR3Q6T4P5 718 aa24.61■■□□□ 1.53
COL21A1-202ENST00000370817 PPP6R1Q9UPN7 881 aa24.04■■□□□ 1.44
COL21A1-202ENST00000370817 ADRA2BP18089 450 aa23.96■■□□□ 1.43
COL21A1-202ENST00000370817 PIAS4Q8N2W9 510 aaPredicted RBP23.89■■□□□ 1.41
COL21A1-202ENST00000370817 MSH5O43196 834 aa23.78■■□□□ 1.4
COL21A1-202ENST00000370817 POTEDQ86YR6 584 aa22.93■■□□□ 1.26
COL21A1-202ENST00000370817 MAPK8IP2Q13387 824 aaPredicted RBP21.95■■□□□ 1.1
COL21A1-202ENST00000370817 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
COL21A1-202ENST00000370817 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
COL21A1-202ENST00000370817 PPP4R3CPQ6ZMV5 832 aa21.61■■□□□ 1.05
COL21A1-202ENST00000370817 CNKSR2Q8WXI2 1034 aa21.15■□□□□ 0.98
COL21A1-202ENST00000370817 HOXD11P31277 338 aaPredicted RBP21.03■□□□□ 0.96
COL21A1-202ENST00000370817 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
COL21A1-202ENST00000370817 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
COL21A1-202ENST00000370817 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
COL21A1-202ENST00000370817 NPM3O75607 178 aaKnown RBP20.55■□□□□ 0.88
COL21A1-202ENST00000370817 KCNA4P22459 653 aa20.35■□□□□ 0.85
COL21A1-202ENST00000370817 RNF39Q9H2S5 420 aa20.34■□□□□ 0.85
COL21A1-202ENST00000370817 CACNB1Q02641 598 aaPredicted RBP20.3■□□□□ 0.84
COL21A1-202ENST00000370817 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
COL21A1-202ENST00000370817 C1QBPQ07021 282 aaKnown RBP20.03■□□□□ 0.8
COL21A1-202ENST00000370817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
COL21A1-202ENST00000370817 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
COL21A1-202ENST00000370817 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
COL21A1-202ENST00000370817 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
COL21A1-202ENST00000370817 SPINK5Q9NQ38 1064 aaPredicted RBP19.32■□□□□ 0.68
COL21A1-202ENST00000370817 CAPN15O75808 1086 aa19.25■□□□□ 0.67
COL21A1-202ENST00000370817 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
COL21A1-202ENST00000370817 DSG3P32926 999 aa19.11■□□□□ 0.65
COL21A1-202ENST00000370817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
COL21A1-202ENST00000370817 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
COL21A1-202ENST00000370817 APLP2Q06481 763 aa19.05■□□□□ 0.64
COL21A1-202ENST00000370817 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
COL21A1-202ENST00000370817 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
COL21A1-202ENST00000370817 MYCNP04198 464 aaPredicted RBP18.98■□□□□ 0.63
COL21A1-202ENST00000370817 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
COL21A1-202ENST00000370817 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
COL21A1-202ENST00000370817 ABCB7O75027 752 aa18.85■□□□□ 0.61
COL21A1-202ENST00000370817 ZBTB22O15209 634 aa18.73■□□□□ 0.59
COL21A1-202ENST00000370817 ATF5Q9Y2D1 282 aaPredicted RBP18.58■□□□□ 0.56
COL21A1-202ENST00000370817 POLA2Q14181 598 aa18.53■□□□□ 0.56
COL21A1-202ENST00000370817 ATXN8OSP0DMR3 200 aa18.27■□□□□ 0.52
COL21A1-202ENST00000370817 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
COL21A1-202ENST00000370817 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
COL21A1-202ENST00000370817 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
COL21A1-202ENST00000370817 POTEHQ6S545 545 aa17.99■□□□□ 0.47
COL21A1-202ENST00000370817 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
COL21A1-202ENST00000370817 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
COL21A1-202ENST00000370817 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
COL21A1-202ENST00000370817 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
COL21A1-202ENST00000370817 FBLN2P98095 1184 aa17.77■□□□□ 0.44
COL21A1-202ENST00000370817 CHRDL2Q6WN34 429 aa17.75■□□□□ 0.43
COL21A1-202ENST00000370817 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
COL21A1-202ENST00000370817 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
COL21A1-202ENST00000370817 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
COL21A1-202ENST00000370817 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
COL21A1-202ENST00000370817 SPDYE2Q495Y8 402 aa17.61■□□□□ 0.41
COL21A1-202ENST00000370817 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
COL21A1-202ENST00000370817 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
COL21A1-202ENST00000370817 SSUH2Q9Y2M2 353 aa17.42■□□□□ 0.38
COL21A1-202ENST00000370817 PIP4P2Q8N4L2 257 aa17.38■□□□□ 0.37
COL21A1-202ENST00000370817 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL21A1-202ENST00000370817 SPDYE1Q8NFV5 336 aaPredicted RBP17.25■□□□□ 0.35
COL21A1-202ENST00000370817 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
COL21A1-202ENST00000370817 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL21A1-202ENST00000370817 ABCC9O60706 1549 aa17.12■□□□□ 0.33
COL21A1-202ENST00000370817 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
COL21A1-202ENST00000370817 HAX1O00165 279 aa16.99■□□□□ 0.31
COL21A1-202ENST00000370817 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
COL21A1-202ENST00000370817 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
COL21A1-202ENST00000370817 PRR29P0C7W0 189 aa16.95■□□□□ 0.3
COL21A1-202ENST00000370817 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
COL21A1-202ENST00000370817 EVX2Q03828 476 aa16.84■□□□□ 0.29
COL21A1-202ENST00000370817 C19orf67A6NJJ6 358 aa16.73■□□□□ 0.27
COL21A1-202ENST00000370817 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
COL21A1-202ENST00000370817 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
COL21A1-202ENST00000370817 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
COL21A1-202ENST00000370817 NACADO15069 1562 aa16.61■□□□□ 0.25
COL21A1-202ENST00000370817 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
COL21A1-202ENST00000370817 PROM2Q8N271 834 aa16.6■□□□□ 0.25
COL21A1-202ENST00000370817 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
COL21A1-202ENST00000370817 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
COL21A1-202ENST00000370817 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
COL21A1-202ENST00000370817 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
COL21A1-202ENST00000370817 GABBR2O75899 941 aa16.44■□□□□ 0.22
COL21A1-202ENST00000370817 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
COL21A1-202ENST00000370817 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
COL21A1-202ENST00000370817 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
COL21A1-202ENST00000370817 FKBP8Q14318 412 aa16.31■□□□□ 0.2
COL21A1-202ENST00000370817 ZRANB1Q9UGI0 708 aa16.3■□□□□ 0.2
COL21A1-202ENST00000370817 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
COL21A1-202ENST00000370817 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL21A1-202ENST00000370817 CLCN6P51797 869 aa16.19■□□□□ 0.18
COL21A1-202ENST00000370817 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
COL21A1-202ENST00000370817 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms