RNA–Protein interactions for RNA: ENST00000358587.5

FRMD1-203, Transcript of FERM domain containing 1, humanhuman

TSL 2

Gene FRMD1, Length 4,677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-203ENST00000358587 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
FRMD1-203ENST00000358587 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
FRMD1-203ENST00000358587 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
FRMD1-203ENST00000358587 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
FRMD1-203ENST00000358587 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
FRMD1-203ENST00000358587 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.05
FRMD1-203ENST00000358587 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
FRMD1-203ENST00000358587 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
FRMD1-203ENST00000358587 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
FRMD1-203ENST00000358587 APLP2Q06481 763 aa21.14■□□□□ 0.98
FRMD1-203ENST00000358587 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
FRMD1-203ENST00000358587 HRCP23327 699 aa20.99■□□□□ 0.95
FRMD1-203ENST00000358587 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
FRMD1-203ENST00000358587 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
FRMD1-203ENST00000358587 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
FRMD1-203ENST00000358587 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
FRMD1-203ENST00000358587 MYT1Q01538 1121 aa20.79■□□□□ 0.92
FRMD1-203ENST00000358587 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
FRMD1-203ENST00000358587 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
FRMD1-203ENST00000358587 YTHDC1Q96MU7 727 aaKnown RBP20.53■□□□□ 0.88
FRMD1-203ENST00000358587 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
FRMD1-203ENST00000358587 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
FRMD1-203ENST00000358587 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
FRMD1-203ENST00000358587 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
FRMD1-203ENST00000358587 NEFLP07196 543 aa20.36■□□□□ 0.85
FRMD1-203ENST00000358587 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
FRMD1-203ENST00000358587 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
FRMD1-203ENST00000358587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
FRMD1-203ENST00000358587 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
FRMD1-203ENST00000358587 ITGAEP38570 1179 aa19.86■□□□□ 0.77
FRMD1-203ENST00000358587 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
FRMD1-203ENST00000358587 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
FRMD1-203ENST00000358587 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
FRMD1-203ENST00000358587 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
FRMD1-203ENST00000358587 DAXXQ9UER7 740 aaPredicted RBP19.54■□□□□ 0.72
FRMD1-203ENST00000358587 POLR3GLQ9BT43 218 aa19.52■□□□□ 0.71
FRMD1-203ENST00000358587 BCANQ96GW7 911 aa19.42■□□□□ 0.7
FRMD1-203ENST00000358587 RTL5Q5HYW3 569 aaPredicted RBP19.4■□□□□ 0.7
FRMD1-203ENST00000358587 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
FRMD1-203ENST00000358587 FAM50AQ14320 339 aaKnown RBP19.37■□□□□ 0.69
FRMD1-203ENST00000358587 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
FRMD1-203ENST00000358587 ANP32CO43423 234 aa19.33■□□□□ 0.68
FRMD1-203ENST00000358587 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
FRMD1-203ENST00000358587 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
FRMD1-203ENST00000358587 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
FRMD1-203ENST00000358587 CLSPNQ9HAW4 1339 aa19.25■□□□□ 0.67
FRMD1-203ENST00000358587 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
FRMD1-203ENST00000358587 TRIM52Q96A61 297 aa19.16■□□□□ 0.66
FRMD1-203ENST00000358587 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
FRMD1-203ENST00000358587 ABCC9O60706 1549 aa19.11■□□□□ 0.65
FRMD1-203ENST00000358587 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
FRMD1-203ENST00000358587 FKBP8Q14318 412 aa19.03■□□□□ 0.64
FRMD1-203ENST00000358587 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
FRMD1-203ENST00000358587 MIER1Q8N108 512 aa18.96■□□□□ 0.63
FRMD1-203ENST00000358587 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
FRMD1-203ENST00000358587 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
FRMD1-203ENST00000358587 DDX10Q13206 875 aaKnown RBP18.9■□□□□ 0.62
FRMD1-203ENST00000358587 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
FRMD1-203ENST00000358587 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
FRMD1-203ENST00000358587 P3H3Q8IVL6 736 aa18.84■□□□□ 0.61
FRMD1-203ENST00000358587 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
FRMD1-203ENST00000358587 TONSLQ96HA7 1378 aa18.81■□□□□ 0.6
FRMD1-203ENST00000358587 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
FRMD1-203ENST00000358587 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
FRMD1-203ENST00000358587 FAM9BQ8IZU0 186 aa18.68■□□□□ 0.58
FRMD1-203ENST00000358587 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
FRMD1-203ENST00000358587 CLIP1P30622 1438 aa18.67■□□□□ 0.58
FRMD1-203ENST00000358587 CEP162Q5TB80 1403 aa18.65■□□□□ 0.58
FRMD1-203ENST00000358587 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
FRMD1-203ENST00000358587 EEA1Q15075 1411 aa18.61■□□□□ 0.57
FRMD1-203ENST00000358587 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
FRMD1-203ENST00000358587 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.56
FRMD1-203ENST00000358587 ARID3CA6NKF2 412 aa18.58■□□□□ 0.56
FRMD1-203ENST00000358587 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
FRMD1-203ENST00000358587 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
FRMD1-203ENST00000358587 NBR1Q14596 966 aa18.54■□□□□ 0.56
FRMD1-203ENST00000358587 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
FRMD1-203ENST00000358587 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
FRMD1-203ENST00000358587 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
FRMD1-203ENST00000358587 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
FRMD1-203ENST00000358587 EIF5BO60841 1220 aaKnown RBP18.51■□□□□ 0.55
FRMD1-203ENST00000358587 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
FRMD1-203ENST00000358587 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
FRMD1-203ENST00000358587 FBLN2P98095 1184 aa18.45■□□□□ 0.54
FRMD1-203ENST00000358587 SUPT16HQ9Y5B9 1047 aaKnown RBP18.45■□□□□ 0.54
FRMD1-203ENST00000358587 CHIC2Q9UKJ5 165 aa18.44■□□□□ 0.54
FRMD1-203ENST00000358587 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
FRMD1-203ENST00000358587 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
FRMD1-203ENST00000358587 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.53
FRMD1-203ENST00000358587 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.53
FRMD1-203ENST00000358587 NEFMP07197 916 aa18.37■□□□□ 0.53
FRMD1-203ENST00000358587 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
FRMD1-203ENST00000358587 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
FRMD1-203ENST00000358587 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
FRMD1-203ENST00000358587 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.33■□□□□ 0.53
FRMD1-203ENST00000358587 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
FRMD1-203ENST00000358587 ANP32BQ92688 251 aaKnown RBP18.3■□□□□ 0.52
FRMD1-203ENST00000358587 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
FRMD1-203ENST00000358587 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
FRMD1-203ENST00000358587 PPP4R2Q9NY27 417 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms