RNA–Protein interactions for RNA: ENST00000355674.9

RSL1D1-201, Transcript of ribosomal L1 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RSL1D1, Length 1,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-201ENST00000355674 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
RSL1D1-201ENST00000355674 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
RSL1D1-201ENST00000355674 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
RSL1D1-201ENST00000355674 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
RSL1D1-201ENST00000355674 FOXD1Q16676 465 aa21.79■■□□□ 1.08
RSL1D1-201ENST00000355674 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
RSL1D1-201ENST00000355674 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
RSL1D1-201ENST00000355674 MSH5O43196 834 aa20.36■□□□□ 0.85
RSL1D1-201ENST00000355674 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
RSL1D1-201ENST00000355674 ADRA2BP18089 450 aa20.31■□□□□ 0.84
RSL1D1-201ENST00000355674 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
RSL1D1-201ENST00000355674 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
RSL1D1-201ENST00000355674 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
RSL1D1-201ENST00000355674 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
RSL1D1-201ENST00000355674 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
RSL1D1-201ENST00000355674 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
RSL1D1-201ENST00000355674 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
RSL1D1-201ENST00000355674 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
RSL1D1-201ENST00000355674 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
RSL1D1-201ENST00000355674 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
RSL1D1-201ENST00000355674 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
RSL1D1-201ENST00000355674 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.38
RSL1D1-201ENST00000355674 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
RSL1D1-201ENST00000355674 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
RSL1D1-201ENST00000355674 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
RSL1D1-201ENST00000355674 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
RSL1D1-201ENST00000355674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.312e-7■■□□□ 12.3
RSL1D1-201ENST00000355674 KCNA4P22459 653 aa16.98■□□□□ 0.31
RSL1D1-201ENST00000355674 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
RSL1D1-201ENST00000355674 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
RSL1D1-201ENST00000355674 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
RSL1D1-201ENST00000355674 CAPN15O75808 1086 aa16.37■□□□□ 0.21
RSL1D1-201ENST00000355674 DSG3P32926 999 aa16.29■□□□□ 0.2
RSL1D1-201ENST00000355674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
RSL1D1-201ENST00000355674 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
RSL1D1-201ENST00000355674 APLP2Q06481 763 aa16.15■□□□□ 0.18
RSL1D1-201ENST00000355674 CCDC180Q9P1Z9 1646 aa16.14■□□□□ 0.17
RSL1D1-201ENST00000355674 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
RSL1D1-201ENST00000355674 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
RSL1D1-201ENST00000355674 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
RSL1D1-201ENST00000355674 ABCB7O75027 752 aa16.02■□□□□ 0.16
RSL1D1-201ENST00000355674 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
RSL1D1-201ENST00000355674 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
RSL1D1-201ENST00000355674 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
RSL1D1-201ENST00000355674 POLA2Q14181 598 aa15.68■□□□□ 0.1
RSL1D1-201ENST00000355674 ABCC9O60706 1549 aa15.66■□□□□ 0.1
RSL1D1-201ENST00000355674 ZBTB22O15209 634 aa15.66■□□□□ 0.1
RSL1D1-201ENST00000355674 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
RSL1D1-201ENST00000355674 POTEHQ6S545 545 aa15.56■□□□□ 0.08
RSL1D1-201ENST00000355674 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
RSL1D1-201ENST00000355674 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
RSL1D1-201ENST00000355674 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
RSL1D1-201ENST00000355674 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
RSL1D1-201ENST00000355674 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
RSL1D1-201ENST00000355674 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
RSL1D1-201ENST00000355674 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
RSL1D1-201ENST00000355674 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
RSL1D1-201ENST00000355674 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0
RSL1D1-201ENST00000355674 NACADO15069 1562 aa15.07■□□□□ 0
RSL1D1-201ENST00000355674 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
RSL1D1-201ENST00000355674 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
RSL1D1-201ENST00000355674 DCAF1Q9Y4B6 1507 aa14.99□□□□□ -0.01
RSL1D1-201ENST00000355674 FBLN2P98095 1184 aa14.98□□□□□ -0.01
RSL1D1-201ENST00000355674 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
RSL1D1-201ENST00000355674 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
RSL1D1-201ENST00000355674 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
RSL1D1-201ENST00000355674 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
RSL1D1-201ENST00000355674 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
RSL1D1-201ENST00000355674 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
RSL1D1-201ENST00000355674 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
RSL1D1-201ENST00000355674 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
RSL1D1-201ENST00000355674 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
RSL1D1-201ENST00000355674 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.055e-10■□□□□ 10.9
RSL1D1-201ENST00000355674 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
RSL1D1-201ENST00000355674 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
RSL1D1-201ENST00000355674 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
RSL1D1-201ENST00000355674 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
RSL1D1-201ENST00000355674 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
RSL1D1-201ENST00000355674 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
RSL1D1-201ENST00000355674 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
RSL1D1-201ENST00000355674 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
RSL1D1-201ENST00000355674 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
RSL1D1-201ENST00000355674 HAX1O00165 279 aa14.54□□□□□ -0.08
RSL1D1-201ENST00000355674 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
RSL1D1-201ENST00000355674 EVX2Q03828 476 aa14.41□□□□□ -0.1
RSL1D1-201ENST00000355674 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
RSL1D1-201ENST00000355674 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
RSL1D1-201ENST00000355674 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
RSL1D1-201ENST00000355674 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
RSL1D1-201ENST00000355674 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
RSL1D1-201ENST00000355674 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
RSL1D1-201ENST00000355674 CC2D2AQ9P2K1 1620 aa14.19□□□□□ -0.14
RSL1D1-201ENST00000355674 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
RSL1D1-201ENST00000355674 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
RSL1D1-201ENST00000355674 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.15
RSL1D1-201ENST00000355674 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
RSL1D1-201ENST00000355674 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
RSL1D1-201ENST00000355674 GABBR2O75899 941 aa14.06□□□□□ -0.16
RSL1D1-201ENST00000355674 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
RSL1D1-201ENST00000355674 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms