RNA–Protein interactions for RNA: ENST00000345111.3

LINC00943-201, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 2,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-201ENST00000345111 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
LINC00943-201ENST00000345111 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
LINC00943-201ENST00000345111 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
LINC00943-201ENST00000345111 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
LINC00943-201ENST00000345111 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
LINC00943-201ENST00000345111 HRCP23327 699 aa13.59□□□□□ -0.23
LINC00943-201ENST00000345111 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
LINC00943-201ENST00000345111 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
LINC00943-201ENST00000345111 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
LINC00943-201ENST00000345111 PCGF6Q9BYE7 350 aa13.13□□□□□ -0.31
LINC00943-201ENST00000345111 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
LINC00943-201ENST00000345111 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
LINC00943-201ENST00000345111 SHROOM4Q9ULL8 1493 aa13.09□□□□□ -0.31
LINC00943-201ENST00000345111 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
LINC00943-201ENST00000345111 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
LINC00943-201ENST00000345111 MYT1Q01538 1121 aa12.93□□□□□ -0.34
LINC00943-201ENST00000345111 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
LINC00943-201ENST00000345111 FOXD1Q16676 465 aa12.89□□□□□ -0.35
LINC00943-201ENST00000345111 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
LINC00943-201ENST00000345111 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
LINC00943-201ENST00000345111 TRIM26Q12899 539 aaPredicted RBP12.86□□□□□ -0.35
LINC00943-201ENST00000345111 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
LINC00943-201ENST00000345111 LOC105371045A0A1W2PR82 267 aa12.64□□□□□ -0.39
LINC00943-201ENST00000345111 ACIN1Q9UKV3 1341 aaKnown RBP12.55□□□□□ -0.4
LINC00943-201ENST00000345111 ADRA2BP18089 450 aa12.53□□□□□ -0.4
LINC00943-201ENST00000345111 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
LINC00943-201ENST00000345111 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
LINC00943-201ENST00000345111 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
LINC00943-201ENST00000345111 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
LINC00943-201ENST00000345111 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
LINC00943-201ENST00000345111 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
LINC00943-201ENST00000345111 ABCC9O60706 1549 aa12.24□□□□□ -0.45
LINC00943-201ENST00000345111 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
LINC00943-201ENST00000345111 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
LINC00943-201ENST00000345111 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.45
LINC00943-201ENST00000345111 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
LINC00943-201ENST00000345111 TTBK1Q5TCY1 1321 aaPredicted RBP12.18□□□□□ -0.46
LINC00943-201ENST00000345111 RSF1Q96T23 1441 aaPredicted RBP12.13□□□□□ -0.47
LINC00943-201ENST00000345111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
LINC00943-201ENST00000345111 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
LINC00943-201ENST00000345111 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
LINC00943-201ENST00000345111 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
LINC00943-201ENST00000345111 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
LINC00943-201ENST00000345111 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
LINC00943-201ENST00000345111 MIER1Q8N108 512 aa11.9□□□□□ -0.5
LINC00943-201ENST00000345111 YTHDC1Q96MU7 727 aaKnown RBP11.9□□□□□ -0.5
LINC00943-201ENST00000345111 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
LINC00943-201ENST00000345111 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
LINC00943-201ENST00000345111 MSH5O43196 834 aa11.81□□□□□ -0.52
LINC00943-201ENST00000345111 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
LINC00943-201ENST00000345111 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
LINC00943-201ENST00000345111 CEP162Q5TB80 1403 aa11.81□□□□□ -0.52
LINC00943-201ENST00000345111 SCRIBQ14160 1630 aa11.8□□□□□ -0.52
LINC00943-201ENST00000345111 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
LINC00943-201ENST00000345111 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
LINC00943-201ENST00000345111 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
LINC00943-201ENST00000345111 EEA1Q15075 1411 aa11.75□□□□□ -0.53
LINC00943-201ENST00000345111 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
LINC00943-201ENST00000345111 BAZ1AQ9NRL2 1556 aaPredicted RBP11.69□□□□□ -0.54
LINC00943-201ENST00000345111 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
LINC00943-201ENST00000345111 WIZO95785 1651 aa11.64□□□□□ -0.55
LINC00943-201ENST00000345111 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
LINC00943-201ENST00000345111 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
LINC00943-201ENST00000345111 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
LINC00943-201ENST00000345111 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
LINC00943-201ENST00000345111 SOGA1O94964 1423 aa11.59□□□□□ -0.55
LINC00943-201ENST00000345111 HNRNPUL2Q1KMD3 747 aaKnown RBP11.58□□□□□ -0.56
LINC00943-201ENST00000345111 ABCC8Q09428 1581 aa11.58□□□□□ -0.56
LINC00943-201ENST00000345111 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
LINC00943-201ENST00000345111 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
LINC00943-201ENST00000345111 NACADO15069 1562 aa11.55□□□□□ -0.56
LINC00943-201ENST00000345111 KCNA4P22459 653 aa11.53□□□□□ -0.56
LINC00943-201ENST00000345111 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
LINC00943-201ENST00000345111 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.57
LINC00943-201ENST00000345111 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
LINC00943-201ENST00000345111 KIF21BO75037 1637 aa11.5□□□□□ -0.57
LINC00943-201ENST00000345111 CLIP1P30622 1438 aa11.49□□□□□ -0.57
LINC00943-201ENST00000345111 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
LINC00943-201ENST00000345111 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
LINC00943-201ENST00000345111 RUSC2Q8N2Y8 1516 aa11.47□□□□□ -0.57
LINC00943-201ENST00000345111 BAZ1BQ9UIG0 1483 aaKnown RBP11.47□□□□□ -0.57
LINC00943-201ENST00000345111 APLP2Q06481 763 aa11.46□□□□□ -0.57
LINC00943-201ENST00000345111 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
LINC00943-201ENST00000345111 CUX2O14529 1486 aa11.43□□□□□ -0.58
LINC00943-201ENST00000345111 FKBP8Q14318 412 aa11.43□□□□□ -0.58
LINC00943-201ENST00000345111 NEFLP07196 543 aa11.42□□□□□ -0.58
LINC00943-201ENST00000345111 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
LINC00943-201ENST00000345111 BCANQ96GW7 911 aa11.38□□□□□ -0.59
LINC00943-201ENST00000345111 RRBP1Q9P2E9 1410 aaKnown RBP11.36□□□□□ -0.59
LINC00943-201ENST00000345111 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
LINC00943-201ENST00000345111 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
LINC00943-201ENST00000345111 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
LINC00943-201ENST00000345111 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
LINC00943-201ENST00000345111 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
LINC00943-201ENST00000345111 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
LINC00943-201ENST00000345111 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
LINC00943-201ENST00000345111 RAPGEF2Q9Y4G8 1499 aa11.29□□□□□ -0.6
LINC00943-201ENST00000345111 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
LINC00943-201ENST00000345111 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.6
LINC00943-201ENST00000345111 TIMELESSQ9UNS1 1208 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms