RNA–Protein interactions for RNA: ENST00000341757.9

SCIN-202, Transcript of scinderin, humanhuman

TSL 1 (best)

Gene SCIN, Length 2,569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIN-202ENST00000341757 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
SCIN-202ENST00000341757 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
SCIN-202ENST00000341757 HRCP23327 699 aa22.01■■□□□ 1.11
SCIN-202ENST00000341757 MYT1Q01538 1121 aa21.68■■□□□ 1.06
SCIN-202ENST00000341757 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
SCIN-202ENST00000341757 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
SCIN-202ENST00000341757 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.98
SCIN-202ENST00000341757 MYO15BQ96JP2 1530 aa20.76■□□□□ 0.91
SCIN-202ENST00000341757 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
SCIN-202ENST00000341757 ACIN1Q9UKV3 1341 aaKnown RBP20.48■□□□□ 0.87
SCIN-202ENST00000341757 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
SCIN-202ENST00000341757 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
SCIN-202ENST00000341757 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
SCIN-202ENST00000341757 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
SCIN-202ENST00000341757 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
SCIN-202ENST00000341757 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
SCIN-202ENST00000341757 TRIM26Q12899 539 aaPredicted RBP20.35■□□□□ 0.85
SCIN-202ENST00000341757 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
SCIN-202ENST00000341757 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
SCIN-202ENST00000341757 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
SCIN-202ENST00000341757 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
SCIN-202ENST00000341757 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
SCIN-202ENST00000341757 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
SCIN-202ENST00000341757 PRKCSHP14314 528 aaPredicted RBP19.89■□□□□ 0.77
SCIN-202ENST00000341757 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
SCIN-202ENST00000341757 ANP32EQ9BTT0 268 aa19.72■□□□□ 0.75
SCIN-202ENST00000341757 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
SCIN-202ENST00000341757 YTHDC1Q96MU7 727 aaKnown RBP19.5■□□□□ 0.71
SCIN-202ENST00000341757 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
SCIN-202ENST00000341757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.7
SCIN-202ENST00000341757 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.7
SCIN-202ENST00000341757 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
SCIN-202ENST00000341757 TSHZ2Q9NRE2 1034 aa19.31■□□□□ 0.68
SCIN-202ENST00000341757 APLP2Q06481 763 aa19.25■□□□□ 0.67
SCIN-202ENST00000341757 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
SCIN-202ENST00000341757 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
SCIN-202ENST00000341757 MIER1Q8N108 512 aa19.17■□□□□ 0.66
SCIN-202ENST00000341757 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
SCIN-202ENST00000341757 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
SCIN-202ENST00000341757 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
SCIN-202ENST00000341757 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
SCIN-202ENST00000341757 ANO8Q9HCE9 1232 aaPredicted RBP18.83■□□□□ 0.6
SCIN-202ENST00000341757 RBM19Q9Y4C8 960 aaKnown RBP18.79■□□□□ 0.6
SCIN-202ENST00000341757 MSH5O43196 834 aa18.69■□□□□ 0.58
SCIN-202ENST00000341757 BCANQ96GW7 911 aa18.68■□□□□ 0.58
SCIN-202ENST00000341757 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
SCIN-202ENST00000341757 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.56
SCIN-202ENST00000341757 SALL2Q9Y467 1007 aaPredicted RBP18.56■□□□□ 0.56
SCIN-202ENST00000341757 FKBP8Q14318 412 aa18.54■□□□□ 0.56
SCIN-202ENST00000341757 UBE2Q2Q8WVN8 375 aa18.51■□□□□ 0.55
SCIN-202ENST00000341757 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
SCIN-202ENST00000341757 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
SCIN-202ENST00000341757 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
SCIN-202ENST00000341757 ITGAEP38570 1179 aa18.39■□□□□ 0.53
SCIN-202ENST00000341757 NEFLP07196 543 aa18.36■□□□□ 0.53
SCIN-202ENST00000341757 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
SCIN-202ENST00000341757 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
SCIN-202ENST00000341757 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
SCIN-202ENST00000341757 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
SCIN-202ENST00000341757 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
SCIN-202ENST00000341757 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
SCIN-202ENST00000341757 NBR1Q14596 966 aa18.16■□□□□ 0.5
SCIN-202ENST00000341757 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
SCIN-202ENST00000341757 EIF5BO60841 1220 aaKnown RBP18.15■□□□□ 0.5
SCIN-202ENST00000341757 ABCC9O60706 1549 aa18.15■□□□□ 0.5
SCIN-202ENST00000341757 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
SCIN-202ENST00000341757 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
SCIN-202ENST00000341757 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
SCIN-202ENST00000341757 PKNOX2Q96KN3 472 aa18.06■□□□□ 0.48
SCIN-202ENST00000341757 NOP58Q9Y2X3 529 aaKnown RBP18.06■□□□□ 0.48
SCIN-202ENST00000341757 RTL5Q5HYW3 569 aaPredicted RBP17.99■□□□□ 0.47
SCIN-202ENST00000341757 PAK3O75914 559 aaPredicted RBP17.98■□□□□ 0.47
SCIN-202ENST00000341757 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
SCIN-202ENST00000341757 TNIKQ9UKE5 1360 aa17.92■□□□□ 0.46
SCIN-202ENST00000341757 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
SCIN-202ENST00000341757 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
SCIN-202ENST00000341757 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
SCIN-202ENST00000341757 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
SCIN-202ENST00000341757 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
SCIN-202ENST00000341757 PPP4R2Q9NY27 417 aa17.79■□□□□ 0.44
SCIN-202ENST00000341757 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
SCIN-202ENST00000341757 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
SCIN-202ENST00000341757 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.44
SCIN-202ENST00000341757 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
SCIN-202ENST00000341757 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
SCIN-202ENST00000341757 NACADO15069 1562 aa17.75■□□□□ 0.43
SCIN-202ENST00000341757 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
SCIN-202ENST00000341757 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
SCIN-202ENST00000341757 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
SCIN-202ENST00000341757 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
SCIN-202ENST00000341757 ANP32CO43423 234 aa17.7■□□□□ 0.42
SCIN-202ENST00000341757 WASHC2CQ9Y4E1 1318 aa17.7■□□□□ 0.42
SCIN-202ENST00000341757 PPP1R15AO75807 674 aaPredicted RBP17.69■□□□□ 0.42
SCIN-202ENST00000341757 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
SCIN-202ENST00000341757 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
SCIN-202ENST00000341757 BRPF3Q9ULD4 1205 aa17.67■□□□□ 0.42
SCIN-202ENST00000341757 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
SCIN-202ENST00000341757 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
SCIN-202ENST00000341757 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
SCIN-202ENST00000341757 GLIPR1L2Q4G1C9 344 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms