RNA–Protein interactions for RNA: ENST00000341310.10

GLI2-201, Transcript of GLI family zinc finger 2, humanhuman

TSL 2

Gene GLI2, Length 4,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI2-201ENST00000341310 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.3
GLI2-201ENST00000341310 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
GLI2-201ENST00000341310 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
GLI2-201ENST00000341310 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
GLI2-201ENST00000341310 EHMT2Q96KQ7 1210 aa27.63■■■□□ 2.01
GLI2-201ENST00000341310 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.96
GLI2-201ENST00000341310 PELP1Q8IZL8 1130 aaKnown RBP27.15■■□□□ 1.94
GLI2-201ENST00000341310 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
GLI2-201ENST00000341310 APLP2Q06481 763 aa26.82■■□□□ 1.88
GLI2-201ENST00000341310 TTBK1Q5TCY1 1321 aaPredicted RBP26.78■■□□□ 1.88
GLI2-201ENST00000341310 ZEB1P37275 1124 aaPredicted RBP26.66■■□□□ 1.86
GLI2-201ENST00000341310 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
GLI2-201ENST00000341310 CCER1Q8TC90 406 aaPredicted RBP26.5■■□□□ 1.83
GLI2-201ENST00000341310 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
GLI2-201ENST00000341310 HRCP23327 699 aa26.22■■□□□ 1.79
GLI2-201ENST00000341310 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
GLI2-201ENST00000341310 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
GLI2-201ENST00000341310 ERICH6Q7L0X2 663 aa26.08■■□□□ 1.77
GLI2-201ENST00000341310 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
GLI2-201ENST00000341310 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
GLI2-201ENST00000341310 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
GLI2-201ENST00000341310 MYT1Q01538 1121 aa25.94■■□□□ 1.74
GLI2-201ENST00000341310 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
GLI2-201ENST00000341310 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.72
GLI2-201ENST00000341310 NEFLP07196 543 aa25.78■■□□□ 1.72
GLI2-201ENST00000341310 ATP1B4Q9UN42 357 aaPredicted RBP25.78■■□□□ 1.72
GLI2-201ENST00000341310 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
GLI2-201ENST00000341310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.32■■□□□ 1.64
GLI2-201ENST00000341310 ITGAEP38570 1179 aa25.29■■□□□ 1.64
GLI2-201ENST00000341310 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
GLI2-201ENST00000341310 GTF3C3Q9Y5Q9 886 aa24.97■■□□□ 1.59
GLI2-201ENST00000341310 POLR3GLQ9BT43 218 aa24.95■■□□□ 1.58
GLI2-201ENST00000341310 CNGB1Q14028 1251 aaPredicted RBP24.86■■□□□ 1.57
GLI2-201ENST00000341310 DAXXQ9UER7 740 aaPredicted RBP24.84■■□□□ 1.57
GLI2-201ENST00000341310 BCANQ96GW7 911 aa24.67■■□□□ 1.54
GLI2-201ENST00000341310 ACIN1Q9UKV3 1341 aaKnown RBP24.66■■□□□ 1.54
GLI2-201ENST00000341310 ZNF316A6NFI3 1004 aaPredicted RBP24.61■■□□□ 1.53
GLI2-201ENST00000341310 RTL5Q5HYW3 569 aaPredicted RBP24.57■■□□□ 1.52
GLI2-201ENST00000341310 FAM50AQ14320 339 aaKnown RBP24.56■■□□□ 1.52
GLI2-201ENST00000341310 NEUROD1Q13562 356 aa24.53■■□□□ 1.52
GLI2-201ENST00000341310 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.5
GLI2-201ENST00000341310 ANP32CO43423 234 aa24.38■■□□□ 1.49
GLI2-201ENST00000341310 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
GLI2-201ENST00000341310 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
GLI2-201ENST00000341310 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
GLI2-201ENST00000341310 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
GLI2-201ENST00000341310 CSRNP3Q8WYN3 585 aa24.2■■□□□ 1.46
GLI2-201ENST00000341310 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
GLI2-201ENST00000341310 SLC4A1APQ9BWU0 796 aaKnown RBP24.17■■□□□ 1.46
GLI2-201ENST00000341310 ABCC9O60706 1549 aa24.12■■□□□ 1.45
GLI2-201ENST00000341310 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
GLI2-201ENST00000341310 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
GLI2-201ENST00000341310 FKBP8Q14318 412 aa24.01■■□□□ 1.43
GLI2-201ENST00000341310 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
GLI2-201ENST00000341310 ANP32AP39687 249 aaKnown RBP23.87■■□□□ 1.41
GLI2-201ENST00000341310 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
GLI2-201ENST00000341310 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
GLI2-201ENST00000341310 MIER1Q8N108 512 aa23.81■■□□□ 1.4
GLI2-201ENST00000341310 HNRNPUQ00839 825 aaKnown RBP eCLIP23.79■■□□□ 1.4
GLI2-201ENST00000341310 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
GLI2-201ENST00000341310 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
GLI2-201ENST00000341310 ARID3CA6NKF2 412 aa23.73■■□□□ 1.39
GLI2-201ENST00000341310 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
GLI2-201ENST00000341310 CANXP27824 592 aaKnown RBP23.69■■□□□ 1.38
GLI2-201ENST00000341310 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
GLI2-201ENST00000341310 ZBTB47Q9UFB7 747 aaPredicted RBP23.59■■□□□ 1.37
GLI2-201ENST00000341310 BCL11AQ9H165 835 aa23.58■■□□□ 1.36
GLI2-201ENST00000341310 FBLN2P98095 1184 aa23.56■■□□□ 1.36
GLI2-201ENST00000341310 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
GLI2-201ENST00000341310 ZNF777Q9ULD5 760 aaPredicted RBP23.54■■□□□ 1.36
GLI2-201ENST00000341310 EIF5BO60841 1220 aaKnown RBP23.51■■□□□ 1.35
GLI2-201ENST00000341310 NBR1Q14596 966 aa23.49■■□□□ 1.35
GLI2-201ENST00000341310 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
GLI2-201ENST00000341310 IRX6P78412 446 aaPredicted RBP23.48■■□□□ 1.35
GLI2-201ENST00000341310 CCDC136Q96JN2 1154 aa23.48■■□□□ 1.35
GLI2-201ENST00000341310 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
GLI2-201ENST00000341310 MRS2Q9HD23 443 aa23.42■■□□□ 1.34
GLI2-201ENST00000341310 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.33
GLI2-201ENST00000341310 CLIP1P30622 1438 aa23.39■■□□□ 1.33
GLI2-201ENST00000341310 TMC1Q8TDI8 760 aa23.38■■□□□ 1.33
GLI2-201ENST00000341310 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
GLI2-201ENST00000341310 NEFMP07197 916 aa23.35■■□□□ 1.33
GLI2-201ENST00000341310 CEP162Q5TB80 1403 aa23.31■■□□□ 1.32
GLI2-201ENST00000341310 ANP32EQ9BTT0 268 aa23.26■■□□□ 1.31
GLI2-201ENST00000341310 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
GLI2-201ENST00000341310 UPF2Q9HAU5 1272 aaKnown RBP23.26■■□□□ 1.31
GLI2-201ENST00000341310 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
GLI2-201ENST00000341310 HSP90AA1P07900 732 aaKnown RBP23.22■■□□□ 1.31
GLI2-201ENST00000341310 EIF4G2P78344 907 aaKnown RBP eCLIP23.19■■□□□ 1.3
GLI2-201ENST00000341310 ANP32BQ92688 251 aaKnown RBP23.19■■□□□ 1.3
GLI2-201ENST00000341310 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
GLI2-201ENST00000341310 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
GLI2-201ENST00000341310 KDM2AQ9Y2K7 1162 aa23.14■■□□□ 1.29
GLI2-201ENST00000341310 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
GLI2-201ENST00000341310 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
GLI2-201ENST00000341310 EEA1Q15075 1411 aa23.13■■□□□ 1.29
GLI2-201ENST00000341310 ARXQ96QS3 562 aa23.13■■□□□ 1.29
GLI2-201ENST00000341310 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
GLI2-201ENST00000341310 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
GLI2-201ENST00000341310 TNIKQ9UKE5 1360 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms