RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
NBPF3-201ENST00000318220 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
NBPF3-201ENST00000318220 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
NBPF3-201ENST00000318220 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
NBPF3-201ENST00000318220 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
NBPF3-201ENST00000318220 ABCC9O60706 1549 aa21.68■■□□□ 1.06
NBPF3-201ENST00000318220 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
NBPF3-201ENST00000318220 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
NBPF3-201ENST00000318220 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
NBPF3-201ENST00000318220 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
NBPF3-201ENST00000318220 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■■□□□ 1
NBPF3-201ENST00000318220 APLP2Q06481 763 aa21.26■□□□□ 0.99
NBPF3-201ENST00000318220 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
NBPF3-201ENST00000318220 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
NBPF3-201ENST00000318220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.92
NBPF3-201ENST00000318220 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.92
NBPF3-201ENST00000318220 MYT1LQ9UL68 1186 aa20.79■□□□□ 0.92
NBPF3-201ENST00000318220 FBLN2P98095 1184 aa20.7■□□□□ 0.9
NBPF3-201ENST00000318220 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
NBPF3-201ENST00000318220 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
NBPF3-201ENST00000318220 PCGF6Q9BYE7 350 aa20.28■□□□□ 0.84
NBPF3-201ENST00000318220 ITGAEP38570 1179 aa20.26■□□□□ 0.83
NBPF3-201ENST00000318220 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
NBPF3-201ENST00000318220 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
NBPF3-201ENST00000318220 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
NBPF3-201ENST00000318220 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
NBPF3-201ENST00000318220 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
NBPF3-201ENST00000318220 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
NBPF3-201ENST00000318220 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
NBPF3-201ENST00000318220 POLR3GLQ9BT43 218 aa19.78■□□□□ 0.76
NBPF3-201ENST00000318220 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
NBPF3-201ENST00000318220 FAM50AQ14320 339 aaKnown RBP19.69■□□□□ 0.74
NBPF3-201ENST00000318220 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
NBPF3-201ENST00000318220 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
NBPF3-201ENST00000318220 ZNF777Q9ULD5 760 aaPredicted RBP19.63■□□□□ 0.73
NBPF3-201ENST00000318220 BCANQ96GW7 911 aa19.61■□□□□ 0.73
NBPF3-201ENST00000318220 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
NBPF3-201ENST00000318220 ESF1Q9H501 851 aaKnown RBP19.58■□□□□ 0.72
NBPF3-201ENST00000318220 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
NBPF3-201ENST00000318220 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
NBPF3-201ENST00000318220 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
NBPF3-201ENST00000318220 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
NBPF3-201ENST00000318220 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
NBPF3-201ENST00000318220 KCNH8Q96L42 1107 aa19.38■□□□□ 0.69
NBPF3-201ENST00000318220 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
NBPF3-201ENST00000318220 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
NBPF3-201ENST00000318220 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
NBPF3-201ENST00000318220 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
NBPF3-201ENST00000318220 STAG3Q9UJ98 1225 aa19.28■□□□□ 0.68
NBPF3-201ENST00000318220 NACADO15069 1562 aa19.24■□□□□ 0.67
NBPF3-201ENST00000318220 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
NBPF3-201ENST00000318220 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
NBPF3-201ENST00000318220 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
NBPF3-201ENST00000318220 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
NBPF3-201ENST00000318220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
NBPF3-201ENST00000318220 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
NBPF3-201ENST00000318220 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
NBPF3-201ENST00000318220 CHIC2Q9UKJ5 165 aa19.05■□□□□ 0.64
NBPF3-201ENST00000318220 PLEKHG5O94827 1062 aa19.03■□□□□ 0.64
NBPF3-201ENST00000318220 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
NBPF3-201ENST00000318220 SLC24A1O60721 1099 aa19.01■□□□□ 0.63
NBPF3-201ENST00000318220 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
NBPF3-201ENST00000318220 PLEKHD1A6NEE1 506 aa18.97■□□□□ 0.63
NBPF3-201ENST00000318220 TSPY4P0CV99 314 aa18.97■□□□□ 0.63
NBPF3-201ENST00000318220 TSPY10P0CW01 314 aa18.97■□□□□ 0.63
NBPF3-201ENST00000318220 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
NBPF3-201ENST00000318220 MLECQ14165 292 aa18.92■□□□□ 0.62
NBPF3-201ENST00000318220 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
NBPF3-201ENST00000318220 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
NBPF3-201ENST00000318220 HRCP23327 699 aa18.9■□□□□ 0.62
NBPF3-201ENST00000318220 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
NBPF3-201ENST00000318220 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
NBPF3-201ENST00000318220 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
NBPF3-201ENST00000318220 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
NBPF3-201ENST00000318220 A0A0G2JS52 829 aa18.8■□□□□ 0.6
NBPF3-201ENST00000318220 PDS5BQ9NTI5 1447 aa18.78■□□□□ 0.6
NBPF3-201ENST00000318220 PPP1R15AO75807 674 aaPredicted RBP18.77■□□□□ 0.6
NBPF3-201ENST00000318220 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
NBPF3-201ENST00000318220 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
NBPF3-201ENST00000318220 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
NBPF3-201ENST00000318220 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
NBPF3-201ENST00000318220 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
NBPF3-201ENST00000318220 NEFLP07196 543 aa18.68■□□□□ 0.58
NBPF3-201ENST00000318220 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
NBPF3-201ENST00000318220 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
NBPF3-201ENST00000318220 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
NBPF3-201ENST00000318220 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
NBPF3-201ENST00000318220 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
NBPF3-201ENST00000318220 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
NBPF3-201ENST00000318220 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
NBPF3-201ENST00000318220 RGL3Q3MIN7 710 aa18.59■□□□□ 0.57
NBPF3-201ENST00000318220 CUX2O14529 1486 aa18.59■□□□□ 0.57
NBPF3-201ENST00000318220 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
NBPF3-201ENST00000318220 LMOD2Q6P5Q4 547 aa18.56■□□□□ 0.56
NBPF3-201ENST00000318220 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
NBPF3-201ENST00000318220 SOGA1O94964 1423 aa18.55■□□□□ 0.56
NBPF3-201ENST00000318220 GGT6Q6P531 493 aa18.55■□□□□ 0.56
NBPF3-201ENST00000318220 NEFMP07197 916 aa18.54■□□□□ 0.56
NBPF3-201ENST00000318220 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
NBPF3-201ENST00000318220 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms