RNA–Protein interactions for RNA: ENSMUST00000217537.1

Gtf3c6-206, Transcript of General transcription factor 3C polypeptide 6, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c6, Length 2,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6-206ENSMUST00000217537 Gm35339A0A140LHH9 1649 aa21.64■■□□□ 1.05
Gtf3c6-206ENSMUST00000217537 NischQ80TM9 1593 aa21.53■■□□□ 1.04
Gtf3c6-206ENSMUST00000217537 Abcc9P70170 1546 aa20.9■□□□□ 0.94
Gtf3c6-206ENSMUST00000217537 Abcc8B2RUS7 1588 aa20.66■□□□□ 0.9
Gtf3c6-206ENSMUST00000217537 ScribQ80U72 1612 aa19.73■□□□□ 0.75
Gtf3c6-206ENSMUST00000217537 Kdm5dQ62240 1548 aa19.17■□□□□ 0.66
Gtf3c6-206ENSMUST00000217537 Rtl1Q7M732 1744 aa19.12■□□□□ 0.65
Gtf3c6-206ENSMUST00000217537 Dcaf1Q80TR8 1506 aa19.1■□□□□ 0.65
Gtf3c6-206ENSMUST00000217537 Rhox8Q6VSS7 320 aa19.1■□□□□ 0.65
Gtf3c6-206ENSMUST00000217537 NacadQ5SWP3 1504 aa19.08■□□□□ 0.64
Gtf3c6-206ENSMUST00000217537 Rb1cc1Q9ESK9 1588 aa18.84■□□□□ 0.61
Gtf3c6-206ENSMUST00000217537 Ccdc180J3QNE4 1664 aa18.81■□□□□ 0.6
Gtf3c6-206ENSMUST00000217537 Sycp2Q9CUU3 1500 aa18.69■□□□□ 0.58
Gtf3c6-206ENSMUST00000217537 Baz1aO88379 1555 aa18.57■□□□□ 0.56
Gtf3c6-206ENSMUST00000217537 Zcchc6Q5BLK4 1491 aaKnown RBP18.42■□□□□ 0.54
Gtf3c6-206ENSMUST00000217537 BicraF8VPZ9 1578 aa18.4■□□□□ 0.54
Gtf3c6-206ENSMUST00000217537 Crybg2B7ZCC2 1516 aa18.32■□□□□ 0.52
Gtf3c6-206ENSMUST00000217537 Rpgrip1Q9EPQ2 1331 aa18.19■□□□□ 0.5
Gtf3c6-206ENSMUST00000217537 Smarca2Q6DIC0 1577 aa18.09■□□□□ 0.49
Gtf3c6-206ENSMUST00000217537 HrcG5E8J6 738 aa17.86■□□□□ 0.45
Gtf3c6-206ENSMUST00000217537 Acin1Q9JIX8 1338 aaKnown RBP17.85■□□□□ 0.45
Gtf3c6-206ENSMUST00000217537 Cecr2E9Q2Z1 1453 aa17.83■□□□□ 0.44
Gtf3c6-206ENSMUST00000217537 Smarca4Q3TKT4 1613 aaKnown RBP17.75■□□□□ 0.43
Gtf3c6-206ENSMUST00000217537 Ccdc136Q3TVA9 1136 aa17.73■□□□□ 0.43
Gtf3c6-206ENSMUST00000217537 Pds5bQ4VA53 1446 aaKnown RBP17.72■□□□□ 0.43
Gtf3c6-206ENSMUST00000217537 Atad2bE9Q166 1460 aaKnown RBP17.65■□□□□ 0.42
Gtf3c6-206ENSMUST00000217537 Ehmt2Q9Z148 1263 aaKnown RBP17.63■□□□□ 0.41
Gtf3c6-206ENSMUST00000217537 Iqgap2Q3UQ44 1575 aa17.6■□□□□ 0.41
Gtf3c6-206ENSMUST00000217537 Synj1Q8CHC4 1574 aa17.56■□□□□ 0.4
Gtf3c6-206ENSMUST00000217537 Brd4Q9ESU6 1400 aaKnown RBP17.54■□□□□ 0.4
Gtf3c6-206ENSMUST00000217537 Cttnbp2B9EJA2 1648 aa17.51■□□□□ 0.39
Gtf3c6-206ENSMUST00000217537 Thoc2B1AZI6 1594 aaKnown RBP17.48■□□□□ 0.39
Gtf3c6-206ENSMUST00000217537 CftrP26361 1476 aa17.48■□□□□ 0.39
Gtf3c6-206ENSMUST00000217537 Trim41Q5NCC3 630 aa17.43■□□□□ 0.38
Gtf3c6-206ENSMUST00000217537 Ercc6F8VPZ5 1481 aa17.42■□□□□ 0.38
Gtf3c6-206ENSMUST00000217537 Wdr62Q3U3T8 1523 aa17.37■□□□□ 0.37
Gtf3c6-206ENSMUST00000217537 Frmpd1A2AKB4 1549 aa17.32■□□□□ 0.36
Gtf3c6-206ENSMUST00000217537 Cep164Q5DU05 1446 aa17.3■□□□□ 0.36
Gtf3c6-206ENSMUST00000217537 Cc2d2aQ8CFW7 1633 aa17.23■□□□□ 0.35
Gtf3c6-206ENSMUST00000217537 Pcgf6Q99NA9 353 aa17.23■□□□□ 0.35
Gtf3c6-206ENSMUST00000217537 Unc13aQ4KUS2 1712 aa17.22■□□□□ 0.35
Gtf3c6-206ENSMUST00000217537 Esf1Q3V1V3 845 aaKnown RBP17.19■□□□□ 0.34
Gtf3c6-206ENSMUST00000217537 Dnajc5bQ9CQ94 199 aa17.19■□□□□ 0.34
Gtf3c6-206ENSMUST00000217537 Fam135aQ6NS59 1506 aa17.15■□□□□ 0.34
Gtf3c6-206ENSMUST00000217537 Golga3P55937 1487 aa17.11■□□□□ 0.33
Gtf3c6-206ENSMUST00000217537 Top2bQ64511 1612 aa17.09■□□□□ 0.33
Gtf3c6-206ENSMUST00000217537 Cngb1E1AZ71 1325 aa17.06■□□□□ 0.32
Gtf3c6-206ENSMUST00000217537 Phldb1Q6PDH0 1371 aaKnown RBP17.05■□□□□ 0.32
Gtf3c6-206ENSMUST00000217537 Rsf1E9PWW9 1441 aaKnown RBP17■□□□□ 0.31
Gtf3c6-206ENSMUST00000217537 Chic1Q8CBW7 227 aa16.94■□□□□ 0.3
Gtf3c6-206ENSMUST00000217537 Supt5hO55201 1082 aaKnown RBP16.9■□□□□ 0.3
Gtf3c6-206ENSMUST00000217537 Lamc3Q9R0B6 1581 aa16.88■□□□□ 0.29
Gtf3c6-206ENSMUST00000217537 Ubl4bQ9CQ84 188 aa16.87■□□□□ 0.29
Gtf3c6-206ENSMUST00000217537 TnnQ80Z71 1560 aa16.87■□□□□ 0.29
Gtf3c6-206ENSMUST00000217537 Ccdc88bQ4QRL3 1481 aa16.85■□□□□ 0.29
Gtf3c6-206ENSMUST00000217537 Baz1bQ9Z277 1479 aa16.85■□□□□ 0.29
Gtf3c6-206ENSMUST00000217537 Kif15Q6P9L6 1387 aa16.84■□□□□ 0.29
Gtf3c6-206ENSMUST00000217537 Fmn1Q05860 1466 aa16.83■□□□□ 0.28
Gtf3c6-206ENSMUST00000217537 Gab3Q8BSM5 595 aa16.82■□□□□ 0.28
Gtf3c6-206ENSMUST00000217537 Mrc2Q64449 1479 aa16.74■□□□□ 0.27
Gtf3c6-206ENSMUST00000217537 Cux2P70298 1426 aa16.73■□□□□ 0.27
Gtf3c6-206ENSMUST00000217537 Camsap1A2AHC3 1581 aa16.67■□□□□ 0.26
Gtf3c6-206ENSMUST00000217537 NefmP08553 848 aa16.66■□□□□ 0.26
Gtf3c6-206ENSMUST00000217537 Mier1Q5UAK0 511 aa16.65■□□□□ 0.26
Gtf3c6-206ENSMUST00000217537 Top2aQ01320 1528 aaKnown RBP16.64■□□□□ 0.25
Gtf3c6-206ENSMUST00000217537 Ccdc18Q640L5 1455 aa16.61■□□□□ 0.25
Gtf3c6-206ENSMUST00000217537 Zeb1Q64318 1117 aa16.6■□□□□ 0.25
Gtf3c6-206ENSMUST00000217537 Kif21aQ9QXL2 1672 aa16.6■□□□□ 0.25
Gtf3c6-206ENSMUST00000217537 Il27Q8K3I6 234 aa16.57■□□□□ 0.24
Gtf3c6-206ENSMUST00000217537 Neurod1Q60867 357 aa16.55■□□□□ 0.24
Gtf3c6-206ENSMUST00000217537 Npm1Q61937 292 aaKnown RBP16.53■□□□□ 0.24
Gtf3c6-206ENSMUST00000217537 Grin2bQ01097 1482 aa16.45■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 Sall2Q9QX96 1004 aa16.44■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 LrpprcQ6PB66 1392 aaKnown RBP16.43■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 Lrriq1Q0P5X1 1673 aa16.42■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 Rapgef2Q8CHG7 1496 aa16.42■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 Dhx29Q6PGC1 1365 aaKnown RBP16.4■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 Crocc2F6XLV1 1638 aa16.4■□□□□ 0.22
Gtf3c6-206ENSMUST00000217537 PogzQ8BZH4 1409 aaKnown RBP16.39■□□□□ 0.21
Gtf3c6-206ENSMUST00000217537 NrkQ9R0G8 1455 aa16.35■□□□□ 0.21
Gtf3c6-206ENSMUST00000217537 Duox2A2AQ99 1517 aa16.34■□□□□ 0.21
Gtf3c6-206ENSMUST00000217537 PtprkP35822 1457 aa16.33■□□□□ 0.21
Gtf3c6-206ENSMUST00000217537 Shroom4Q1W617 1475 aa16.33■□□□□ 0.21
Gtf3c6-206ENSMUST00000217537 UbtfP25976 765 aaKnown RBP16.3■□□□□ 0.2
Gtf3c6-206ENSMUST00000217537 Samd9lQ69Z37 1561 aa16.29■□□□□ 0.2
Gtf3c6-206ENSMUST00000217537 Urb2E9Q7L1 1524 aaKnown RBP16.28■□□□□ 0.2
Gtf3c6-206ENSMUST00000217537 Cep162Q6ZQ06 1403 aa16.27■□□□□ 0.2
Gtf3c6-206ENSMUST00000217537 Plb1Q3TTY0 1478 aa16.27■□□□□ 0.2
Gtf3c6-206ENSMUST00000217537 Efcab5A0JP43 1406 aa16.25■□□□□ 0.19
Gtf3c6-206ENSMUST00000217537 Npm2Q80W85 207 aa16.23■□□□□ 0.19
Gtf3c6-206ENSMUST00000217537 Eif4g1Q6NZJ6 1600 aaKnown RBP16.2■□□□□ 0.18
Gtf3c6-206ENSMUST00000217537 Las1lA2BE28 776 aaKnown RBP16.19■□□□□ 0.18
Gtf3c6-206ENSMUST00000217537 Aebp2Q9Z248 504 aaKnown RBP16.19■□□□□ 0.18
Gtf3c6-206ENSMUST00000217537 Eif4g3Q80XI3 1579 aaKnown RBP16.17■□□□□ 0.18
Gtf3c6-206ENSMUST00000217537 Anks4bQ8K3X6 423 aa16.16■□□□□ 0.18
Gtf3c6-206ENSMUST00000217537 Arhgap35Q91YM2 1499 aa16.14■□□□□ 0.17
Gtf3c6-206ENSMUST00000217537 Wdr66E9Q743 1299 aa16.14■□□□□ 0.17
Gtf3c6-206ENSMUST00000217537 Myt1lP97500 1187 aa16.14■□□□□ 0.17
Gtf3c6-206ENSMUST00000217537 Ift140E9PY46 1464 aa16.13■□□□□ 0.17
Gtf3c6-206ENSMUST00000217537 Rad54l2Q99NG0 1466 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms