RNA–Protein interactions for RNA: ENSMUST00000196449.4

Vcam1-203, Transcript of Vascular cell adhesion protein 1, mousemouse

TSL 1 (best) BASIC

Gene Vcam1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1-203ENSMUST00000196449 Gm35339A0A140LHH9 1649 aa13.68□□□□□ -0.22
Vcam1-203ENSMUST00000196449 NischQ80TM9 1593 aa13.34□□□□□ -0.27
Vcam1-203ENSMUST00000196449 Abcc9P70170 1546 aa12.95□□□□□ -0.34
Vcam1-203ENSMUST00000196449 Abcc8B2RUS7 1588 aa12.95□□□□□ -0.34
Vcam1-203ENSMUST00000196449 Chic1Q8CBW7 227 aa12.65□□□□□ -0.38
Vcam1-203ENSMUST00000196449 ScribQ80U72 1612 aa12.55□□□□□ -0.4
Vcam1-203ENSMUST00000196449 Rhox8Q6VSS7 320 aa12.36□□□□□ -0.43
Vcam1-203ENSMUST00000196449 NacadQ5SWP3 1504 aa12.17□□□□□ -0.46
Vcam1-203ENSMUST00000196449 Rtl1Q7M732 1744 aa12.16□□□□□ -0.46
Vcam1-203ENSMUST00000196449 Kdm5dQ62240 1548 aa12.1□□□□□ -0.47
Vcam1-203ENSMUST00000196449 Mapk8ip2Q9ERE9 830 aa12.07□□□□□ -0.48
Vcam1-203ENSMUST00000196449 Dcaf1Q80TR8 1506 aa11.96□□□□□ -0.49
Vcam1-203ENSMUST00000196449 Ccdc180J3QNE4 1664 aa11.95□□□□□ -0.5
Vcam1-203ENSMUST00000196449 Sycp2Q9CUU3 1500 aa11.93□□□□□ -0.5
Vcam1-203ENSMUST00000196449 Zcchc6Q5BLK4 1491 aaKnown RBP11.76□□□□□ -0.53
Vcam1-203ENSMUST00000196449 BicraF8VPZ9 1578 aa11.76□□□□□ -0.53
Vcam1-203ENSMUST00000196449 Rb1cc1Q9ESK9 1588 aa11.69□□□□□ -0.54
Vcam1-203ENSMUST00000196449 Baz1aO88379 1555 aa11.55□□□□□ -0.56
Vcam1-203ENSMUST00000196449 Crybg2B7ZCC2 1516 aa11.53□□□□□ -0.56
Vcam1-203ENSMUST00000196449 Pds5bQ4VA53 1446 aaKnown RBP11.49□□□□□ -0.57
Vcam1-203ENSMUST00000196449 Dnajc5bQ9CQ94 199 aa11.48□□□□□ -0.57
Vcam1-203ENSMUST00000196449 Ccdc136Q3TVA9 1136 aa11.47□□□□□ -0.57
Vcam1-203ENSMUST00000196449 Thoc2B1AZI6 1594 aaKnown RBP11.45□□□□□ -0.58
Vcam1-203ENSMUST00000196449 HrcG5E8J6 738 aa11.41□□□□□ -0.58
Vcam1-203ENSMUST00000196449 Atad2bE9Q166 1460 aaKnown RBP11.35□□□□□ -0.59
Vcam1-203ENSMUST00000196449 Smarca2Q6DIC0 1577 aa11.29□□□□□ -0.6
Vcam1-203ENSMUST00000196449 Rpgrip1Q9EPQ2 1331 aa11.24□□□□□ -0.61
Vcam1-203ENSMUST00000196449 Phf23Q8BSN5 401 aa11.23□□□□□ -0.61
Vcam1-203ENSMUST00000196449 Trim41Q5NCC3 630 aa11.23□□□□□ -0.61
Vcam1-203ENSMUST00000196449 Ercc6F8VPZ5 1481 aa11.22□□□□□ -0.61
Vcam1-203ENSMUST00000196449 Cc2d2aQ8CFW7 1633 aa11.21□□□□□ -0.62
Vcam1-203ENSMUST00000196449 Smarca4Q3TKT4 1613 aaKnown RBP11.2□□□□□ -0.62
Vcam1-203ENSMUST00000196449 Baz1bQ9Z277 1479 aa11.17□□□□□ -0.62
Vcam1-203ENSMUST00000196449 Fam135aQ6NS59 1506 aa11.17□□□□□ -0.62
Vcam1-203ENSMUST00000196449 Iqgap2Q3UQ44 1575 aa11.14□□□□□ -0.63
Vcam1-203ENSMUST00000196449 Acin1Q9JIX8 1338 aaKnown RBP11.13□□□□□ -0.63
Vcam1-203ENSMUST00000196449 Ehmt2Q9Z148 1263 aaKnown RBP11.11□□□□□ -0.63
Vcam1-203ENSMUST00000196449 Wdr62Q3U3T8 1523 aa11.08□□□□□ -0.64
Vcam1-203ENSMUST00000196449 Cep164Q5DU05 1446 aa11.06□□□□□ -0.64
Vcam1-203ENSMUST00000196449 Plppr3Q7TPB0 716 aa11.05□□□□□ -0.64
Vcam1-203ENSMUST00000196449 Cecr2E9Q2Z1 1453 aa11.05□□□□□ -0.64
Vcam1-203ENSMUST00000196449 Frmpd1A2AKB4 1549 aa11.04□□□□□ -0.64
Vcam1-203ENSMUST00000196449 Phldb1Q6PDH0 1371 aaKnown RBP11.03□□□□□ -0.64
Vcam1-203ENSMUST00000196449 Brd4Q9ESU6 1400 aaKnown RBP11.01□□□□□ -0.65
Vcam1-203ENSMUST00000196449 Cngb1E1AZ71 1325 aa10.96□□□□□ -0.65
Vcam1-203ENSMUST00000196449 Rsf1E9PWW9 1441 aaKnown RBP10.94□□□□□ -0.66
Vcam1-203ENSMUST00000196449 Synj1Q8CHC4 1574 aa10.94□□□□□ -0.66
Vcam1-203ENSMUST00000196449 Golga3P55937 1487 aa10.92□□□□□ -0.66
Vcam1-203ENSMUST00000196449 Gab3Q8BSM5 595 aa10.91□□□□□ -0.66
Vcam1-203ENSMUST00000196449 Unc13aQ4KUS2 1712 aa10.9□□□□□ -0.66
Vcam1-203ENSMUST00000196449 Ccdc88bQ4QRL3 1481 aa10.87□□□□□ -0.67
Vcam1-203ENSMUST00000196449 Mrc2Q64449 1479 aa10.87□□□□□ -0.67
Vcam1-203ENSMUST00000196449 CftrP26361 1476 aa10.87□□□□□ -0.67
Vcam1-203ENSMUST00000196449 Cttnbp2B9EJA2 1648 aa10.86□□□□□ -0.67
Vcam1-203ENSMUST00000196449 Ubl4bQ9CQ84 188 aa10.85□□□□□ -0.67
Vcam1-203ENSMUST00000196449 Esf1Q3V1V3 845 aaKnown RBP10.8□□□□□ -0.68
Vcam1-203ENSMUST00000196449 Top2bQ64511 1612 aa10.79□□□□□ -0.68
Vcam1-203ENSMUST00000196449 Pcgf6Q99NA9 353 aa10.65□□□□□ -0.7
Vcam1-203ENSMUST00000196449 Lrriq1Q0P5X1 1673 aa10.64□□□□□ -0.71
Vcam1-203ENSMUST00000196449 Fmn1Q05860 1466 aa10.62□□□□□ -0.71
Vcam1-203ENSMUST00000196449 Dnajc5P60904 198 aa10.61□□□□□ -0.71
Vcam1-203ENSMUST00000196449 Cux2P70298 1426 aa10.6□□□□□ -0.71
Vcam1-203ENSMUST00000196449 Rapgef2Q8CHG7 1496 aa10.58□□□□□ -0.72
Vcam1-203ENSMUST00000196449 Lamc3Q9R0B6 1581 aa10.58□□□□□ -0.72
Vcam1-203ENSMUST00000196449 Top2aQ01320 1528 aaKnown RBP10.58□□□□□ -0.72
Vcam1-203ENSMUST00000196449 Kif21aQ9QXL2 1672 aa10.57□□□□□ -0.72
Vcam1-203ENSMUST00000196449 Mier1Q5UAK0 511 aa10.56□□□□□ -0.72
Vcam1-203ENSMUST00000196449 Kif15Q6P9L6 1387 aa10.56□□□□□ -0.72
Vcam1-203ENSMUST00000196449 Eif4g3Q80XI3 1579 aaKnown RBP10.52□□□□□ -0.73
Vcam1-203ENSMUST00000196449 Supt5hO55201 1082 aaKnown RBP10.51□□□□□ -0.73
Vcam1-203ENSMUST00000196449 Cep162Q6ZQ06 1403 aa10.5□□□□□ -0.73
Vcam1-203ENSMUST00000196449 NefmP08553 848 aa10.5□□□□□ -0.73
Vcam1-203ENSMUST00000196449 Shroom2A2ALU4 1481 aa10.48□□□□□ -0.73
Vcam1-203ENSMUST00000196449 Npm1Q61937 292 aaKnown RBP10.46□□□□□ -0.74
Vcam1-203ENSMUST00000196449 TnnQ80Z71 1560 aa10.44□□□□□ -0.74
Vcam1-203ENSMUST00000196449 Myt1lP97500 1187 aa10.44□□□□□ -0.74
Vcam1-203ENSMUST00000196449 UbtfP25976 765 aaKnown RBP10.42□□□□□ -0.74
Vcam1-203ENSMUST00000196449 Zeb1Q64318 1117 aa10.41□□□□□ -0.74
Vcam1-203ENSMUST00000196449 Npm2Q80W85 207 aa10.41□□□□□ -0.74
Vcam1-203ENSMUST00000196449 Eif4g1Q6NZJ6 1600 aaKnown RBP10.41□□□□□ -0.74
Vcam1-203ENSMUST00000196449 Ccdc18Q640L5 1455 aa10.41□□□□□ -0.74
Vcam1-203ENSMUST00000196449 Senp3Q9EP97 568 aaKnown RBP10.4□□□□□ -0.75
Vcam1-203ENSMUST00000196449 Urb2E9Q7L1 1524 aaKnown RBP10.39□□□□□ -0.75
Vcam1-203ENSMUST00000196449 Dhx29Q6PGC1 1365 aaKnown RBP10.37□□□□□ -0.75
Vcam1-203ENSMUST00000196449 Crocc2F6XLV1 1638 aa10.36□□□□□ -0.75
Vcam1-203ENSMUST00000196449 Camsap1A2AHC3 1581 aa10.35□□□□□ -0.75
Vcam1-203ENSMUST00000196449 Plb1Q3TTY0 1478 aa10.35□□□□□ -0.75
Vcam1-203ENSMUST00000196449 LrpprcQ6PB66 1392 aaKnown RBP10.35□□□□□ -0.75
Vcam1-203ENSMUST00000196449 Clip1Q922J3 1391 aa10.34□□□□□ -0.75
Vcam1-203ENSMUST00000196449 PtprkP35822 1457 aa10.33□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Ift140E9PY46 1464 aa10.32□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Arhgap35Q91YM2 1499 aa10.32□□□□□ -0.76
Vcam1-203ENSMUST00000196449 NrkQ9R0G8 1455 aa10.31□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Col17a1Q07563 1470 aa10.31□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Rusc2Q80U22 1514 aa10.3□□□□□ -0.76
Vcam1-203ENSMUST00000196449 PogzQ8BZH4 1409 aaKnown RBP10.29□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Il27Q8K3I6 234 aa10.29□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Plekhg3Q4VAC9 1341 aa10.28□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Sall2Q9QX96 1004 aa10.28□□□□□ -0.76
Vcam1-203ENSMUST00000196449 Pabpn1Q8CCS6 302 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 134.4 ms