RNA–Protein interactions for RNA: ENSMUST00000185927.1

Hmgb1-rs16-201, mousemouse

BASIC

Gene Hmgb1-rs16, Length 613 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-rs16-201ENSMUST00000185927 Mapk8ip2Q9ERE9 830 aa18.19■□□□□ 0.5
Hmgb1-rs16-201ENSMUST00000185927 Chic1Q8CBW7 227 aa17.26■□□□□ 0.35
Hmgb1-rs16-201ENSMUST00000185927 Phf23Q8BSN5 401 aa15.43■□□□□ 0.06
Hmgb1-rs16-201ENSMUST00000185927 Gab3Q8BSM5 595 aa14.33□□□□□ -0.12
Hmgb1-rs16-201ENSMUST00000185927 Fam163aQ8CAA5 168 aa13.98□□□□□ -0.17
Hmgb1-rs16-201ENSMUST00000185927 Plppr3Q7TPB0 716 aa13.81□□□□□ -0.2
Hmgb1-rs16-201ENSMUST00000185927 Senp3Q9EP97 568 aaKnown RBP13.65□□□□□ -0.22
Hmgb1-rs16-201ENSMUST00000185927 GapdhsQ64467 440 aa13.09□□□□□ -0.31
Hmgb1-rs16-201ENSMUST00000185927 ArsiQ32KI9 573 aa12.59□□□□□ -0.39
Hmgb1-rs16-201ENSMUST00000185927 Hoxd11P23813 323 aa12.46□□□□□ -0.41
Hmgb1-rs16-201ENSMUST00000185927 Slc34a2Q9DBP0 697 aa12.31□□□□□ -0.44
Hmgb1-rs16-201ENSMUST00000185927 Znf219Q6IQX8 726 aa12.17□□□□□ -0.46
Hmgb1-rs16-201ENSMUST00000185927 Trap1aP19473 224 aa11.95□□□□□ -0.5
Hmgb1-rs16-201ENSMUST00000185927 Kcna4Q61423 654 aa11.75□□□□□ -0.53
Hmgb1-rs16-201ENSMUST00000185927 Dnajc5bQ9CQ94 199 aa11.74□□□□□ -0.53
Hmgb1-rs16-201ENSMUST00000185927 Akt1s1Q9D1F4 257 aa11.6□□□□□ -0.55
Hmgb1-rs16-201ENSMUST00000185927 Rsph4aQ8BYM7 716 aa11.51□□□□□ -0.57
Hmgb1-rs16-201ENSMUST00000185927 Chrna2Q91X60 512 aa11.5□□□□□ -0.57
Hmgb1-rs16-201ENSMUST00000185927 Rimbp2Q80U40 1072 aa11.45□□□□□ -0.58
Hmgb1-rs16-201ENSMUST00000185927 Znf704Q9ERQ3 566 aa11.25□□□□□ -0.61
Hmgb1-rs16-201ENSMUST00000185927 Slc4a5E9Q3M5 1116 aa11.23□□□□□ -0.61
Hmgb1-rs16-201ENSMUST00000185927 Cacnb1Q8R3Z5 597 aa11.04□□□□□ -0.64
Hmgb1-rs16-201ENSMUST00000185927 Ildr2B5TVM2 661 aa10.65□□□□□ -0.7
Hmgb1-rs16-201ENSMUST00000185927 Znf703P0CL69 594 aa10.64□□□□□ -0.71
Hmgb1-rs16-201ENSMUST00000185927 Sox12Q04890 314 aa10.45□□□□□ -0.74
Hmgb1-rs16-201ENSMUST00000185927 Dmrt2Q8BG36 561 aa10.41□□□□□ -0.74
Hmgb1-rs16-201ENSMUST00000185927 Atf5O70191 283 aa10.4□□□□□ -0.74
Hmgb1-rs16-201ENSMUST00000185927 Bach1P97302 739 aa10.35□□□□□ -0.75
Hmgb1-rs16-201ENSMUST00000185927 Prr29B1ARI9 187 aa10.29□□□□□ -0.76
Hmgb1-rs16-201ENSMUST00000185927 Grwd1Q810D6 446 aaKnown RBP10.24□□□□□ -0.77
Hmgb1-rs16-201ENSMUST00000185927 Egfem1Q8C088 590 aa10.24□□□□□ -0.77
Hmgb1-rs16-201ENSMUST00000185927 Kcnn1Q9EQR3 537 aa10.23□□□□□ -0.77
Hmgb1-rs16-201ENSMUST00000185927 Hs6st3Q9QYK4 470 aa10.22□□□□□ -0.77
Hmgb1-rs16-201ENSMUST00000185927 Zbtb7aO88939 569 aaKnown RBP10.15□□□□□ -0.78
Hmgb1-rs16-201ENSMUST00000185927 Ppp4r2Q0VGB7 417 aa10.14□□□□□ -0.79
Hmgb1-rs16-201ENSMUST00000185927 Abcb7Q61102 752 aaKnown RBP9.96□□□□□ -0.82
Hmgb1-rs16-201ENSMUST00000185927 Pip4p2Q9CZX7 257 aa9.92□□□□□ -0.82
Hmgb1-rs16-201ENSMUST00000185927 WdpcpQ8C456 722 aa9.85□□□□□ -0.83
Hmgb1-rs16-201ENSMUST00000185927 Ppargc1bQ8VHJ7 1014 aa9.82□□□□□ -0.84
Hmgb1-rs16-201ENSMUST00000185927 Ifnlr1Q8CGK5 535 aa9.79□□□□□ -0.84
Hmgb1-rs16-201ENSMUST00000185927 Rnf216P58283 853 aa9.78□□□□□ -0.84
Hmgb1-rs16-201ENSMUST00000185927 Clcn6O35454 870 aa9.76□□□□□ -0.85
Hmgb1-rs16-201ENSMUST00000185927 Evx2P49749 475 aa9.73□□□□□ -0.85
Hmgb1-rs16-201ENSMUST00000185927 Kank3Q9Z1P7 791 aa9.73□□□□□ -0.85
Hmgb1-rs16-201ENSMUST00000185927 G430095P16RikE9Q913 147 aa9.71□□□□□ -0.86
Hmgb1-rs16-201ENSMUST00000185927 Nkx1-1G3UXB3 402 aa9.7□□□□□ -0.86
Hmgb1-rs16-201ENSMUST00000185927 Foxp4Q9DBY0 795 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-rs16-201ENSMUST00000185927 Gtpbp6Q3U6U5 514 aa9.54□□□□□ -0.88
Hmgb1-rs16-201ENSMUST00000185927 ArntlQ9WTL8 632 aa9.5□□□□□ -0.89
Hmgb1-rs16-201ENSMUST00000185927 Zbtb12Q9Z150 459 aa9.5□□□□□ -0.89
Hmgb1-rs16-201ENSMUST00000185927 Pitpnm1O35954 1243 aa9.49□□□□□ -0.89
Hmgb1-rs16-201ENSMUST00000185927 Cdca7Q9D0M2 382 aa9.46□□□□□ -0.9
Hmgb1-rs16-201ENSMUST00000185927 Trim35Q8C006 501 aa9.42□□□□□ -0.9
Hmgb1-rs16-201ENSMUST00000185927 1700123L14RikQ3V2K7 440 aa9.41□□□□□ -0.9
Hmgb1-rs16-201ENSMUST00000185927 Krtap4-1Q3UUY3 169 aa9.38□□□□□ -0.91
Hmgb1-rs16-201ENSMUST00000185927 Slc4a1apE9PX68 744 aa9.29□□□□□ -0.92
Hmgb1-rs16-201ENSMUST00000185927 Lhx8O35652 367 aa9.21□□□□□ -0.94
Hmgb1-rs16-201ENSMUST00000185927 Fxr2Q9WVR4 673 aaKnown RBP9.12□□□□□ -0.95
Hmgb1-rs16-201ENSMUST00000185927 C1qtnf12Q8R2Z0 308 aa9.1□□□□□ -0.95
Hmgb1-rs16-201ENSMUST00000185927 Ube2uB1AUC4 352 aa9.08□□□□□ -0.96
Hmgb1-rs16-201ENSMUST00000185927 Ms4a5Q810P8 197 aa9.05□□□□□ -0.96
Hmgb1-rs16-201ENSMUST00000185927 Dok7Q18PE0 504 aa8.92□□□□□ -0.98
Hmgb1-rs16-201ENSMUST00000185927 Ehmt2Q9Z148 1263 aaKnown RBP8.91□□□□□ -0.98
Hmgb1-rs16-201ENSMUST00000185927 Kiaa1522A2A7S8 1013 aa8.9□□□□□ -0.98
Hmgb1-rs16-201ENSMUST00000185927 Rnf225Q9D7D1 332 aa8.8□□□□□ -1
Hmgb1-rs16-201ENSMUST00000185927 Fbln2P37889 1221 aa8.77□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Gjc2Q8BQU6 440 aa8.77□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Nyap1Q6PFX7 833 aa8.76□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Cadps2Q8BYR5 1297 aa8.75□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Gm11555B1AQ89 175 aa8.74□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Map3k10Q66L42 940 aa8.74□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Dcbld2Q91ZV3 769 aa8.72□□□□□ -1.01
Hmgb1-rs16-201ENSMUST00000185927 Gm11563B1AQ90 168 aa8.69□□□□□ -1.02
Hmgb1-rs16-201ENSMUST00000185927 SnphQ80U23 495 aa8.69□□□□□ -1.02
Hmgb1-rs16-201ENSMUST00000185927 Krtap4-7Q9D732 168 aa8.69□□□□□ -1.02
Hmgb1-rs16-201ENSMUST00000185927 Trim41Q5NCC3 630 aa8.65□□□□□ -1.02
Hmgb1-rs16-201ENSMUST00000185927 Npm3Q9CPP0 175 aaKnown RBP8.62□□□□□ -1.03
Hmgb1-rs16-201ENSMUST00000185927 Fam71e1A1L3C1 212 aa8.59□□□□□ -1.03
Hmgb1-rs16-201ENSMUST00000185927 Zranb1Q7M760 708 aa8.59□□□□□ -1.03
Hmgb1-rs16-201ENSMUST00000185927 Pelp1Q9DBD5 1123 aaKnown RBP8.55□□□□□ -1.04
Hmgb1-rs16-201ENSMUST00000185927 Pcdh10E9PXQ7 1057 aa8.5□□□□□ -1.05
Hmgb1-rs16-201ENSMUST00000185927 Skida1Q80YR3 822 aa8.5□□□□□ -1.05
Hmgb1-rs16-201ENSMUST00000185927 TMEM121BQ99MX7 572 aa8.48□□□□□ -1.05
Hmgb1-rs16-201ENSMUST00000185927 Riok3Q9DBU3 519 aaKnown RBP8.48□□□□□ -1.05
Hmgb1-rs16-201ENSMUST00000185927 Znf710Q3U288 666 aa8.46□□□□□ -1.06
Hmgb1-rs16-201ENSMUST00000185927 MpndQ3TV65 487 aa8.37□□□□□ -1.07
Hmgb1-rs16-201ENSMUST00000185927 St18Q80TY4 1045 aa8.37□□□□□ -1.07
Hmgb1-rs16-201ENSMUST00000185927 AcrbpQ3V140 540 aa8.36□□□□□ -1.07
Hmgb1-rs16-201ENSMUST00000185927 Nlrp6Q91WS2 869 aa8.36□□□□□ -1.07
Hmgb1-rs16-201ENSMUST00000185927 Dmrta2A2A9A2 531 aa8.34□□□□□ -1.07
Hmgb1-rs16-201ENSMUST00000185927 Hmx1O70218 332 aa8.33□□□□□ -1.08
Hmgb1-rs16-201ENSMUST00000185927 Lce6aD3YV94 81 aa8.3□□□□□ -1.08
Hmgb1-rs16-201ENSMUST00000185927 OsbpQ3B7Z2 805 aa8.27□□□□□ -1.09
Hmgb1-rs16-201ENSMUST00000185927 Pde4cQ3UEI1 686 aa8.26□□□□□ -1.09
Hmgb1-rs16-201ENSMUST00000185927 ZxdbA2CE44 873 aa8.21□□□□□ -1.1
Hmgb1-rs16-201ENSMUST00000185927 Jarid2Q62315 1234 aa8.21□□□□□ -1.1
Hmgb1-rs16-201ENSMUST00000185927 Rtn4Q99P72 1162 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-rs16-201ENSMUST00000185927 MyclP10166 368 aa8.2□□□□□ -1.1
Hmgb1-rs16-201ENSMUST00000185927 Scarf1Q5ND28 820 aa8.18□□□□□ -1.1
Hmgb1-rs16-201ENSMUST00000185927 Npm2Q80W85 207 aa8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms