RNA–Protein interactions for RNA: ENSMUST00000174387.1

Usp3-211, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

TSL 5 BASIC

Gene Usp3, Length 1,901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-211ENSMUST00000174387 NischQ80TM9 1593 aa24.89■■□□□ 1.58
Usp3-211ENSMUST00000174387 Gm35339A0A140LHH9 1649 aa24.79■■□□□ 1.56
Usp3-211ENSMUST00000174387 Abcc9P70170 1546 aa24.21■■□□□ 1.47
Usp3-211ENSMUST00000174387 Abcc8B2RUS7 1588 aa23.77■■□□□ 1.4
Usp3-211ENSMUST00000174387 Rhox8Q6VSS7 320 aa22.47■■□□□ 1.19
Usp3-211ENSMUST00000174387 Dcaf1Q80TR8 1506 aa22.29■■□□□ 1.16
Usp3-211ENSMUST00000174387 ScribQ80U72 1612 aa22.28■■□□□ 1.16
Usp3-211ENSMUST00000174387 Rtl1Q7M732 1744 aa22.18■■□□□ 1.14
Usp3-211ENSMUST00000174387 Kdm5dQ62240 1548 aa21.81■■□□□ 1.08
Usp3-211ENSMUST00000174387 NacadQ5SWP3 1504 aa21.78■■□□□ 1.08
Usp3-211ENSMUST00000174387 Rb1cc1Q9ESK9 1588 aa21.77■■□□□ 1.08
Usp3-211ENSMUST00000174387 Ccdc180J3QNE4 1664 aa21.76■■□□□ 1.07
Usp3-211ENSMUST00000174387 Baz1aO88379 1555 aa21.58■■□□□ 1.04
Usp3-211ENSMUST00000174387 Crybg2B7ZCC2 1516 aa21.41■■□□□ 1.02
Usp3-211ENSMUST00000174387 Zcchc6Q5BLK4 1491 aaKnown RBP21.33■■□□□ 1
Usp3-211ENSMUST00000174387 Sycp2Q9CUU3 1500 aa21.29■■□□□ 1
Usp3-211ENSMUST00000174387 Smarca2Q6DIC0 1577 aa21.04■□□□□ 0.96
Usp3-211ENSMUST00000174387 Ccdc136Q3TVA9 1136 aa20.83■□□□□ 0.93
Usp3-211ENSMUST00000174387 BicraF8VPZ9 1578 aa20.79■□□□□ 0.92
Usp3-211ENSMUST00000174387 Trim41Q5NCC3 630 aa20.68■□□□□ 0.9
Usp3-211ENSMUST00000174387 HrcG5E8J6 738 aa20.65■□□□□ 0.9
Usp3-211ENSMUST00000174387 Brd4Q9ESU6 1400 aaKnown RBP20.55■□□□□ 0.88
Usp3-211ENSMUST00000174387 Cecr2E9Q2Z1 1453 aa20.49■□□□□ 0.87
Usp3-211ENSMUST00000174387 Synj1Q8CHC4 1574 aa20.29■□□□□ 0.84
Usp3-211ENSMUST00000174387 Smarca4Q3TKT4 1613 aaKnown RBP20.29■□□□□ 0.84
Usp3-211ENSMUST00000174387 CftrP26361 1476 aa20.27■□□□□ 0.84
Usp3-211ENSMUST00000174387 Cttnbp2B9EJA2 1648 aa20.23■□□□□ 0.83
Usp3-211ENSMUST00000174387 Golga3P55937 1487 aa20.16■□□□□ 0.82
Usp3-211ENSMUST00000174387 Cep164Q5DU05 1446 aa20.13■□□□□ 0.81
Usp3-211ENSMUST00000174387 Atad2bE9Q166 1460 aaKnown RBP20.08■□□□□ 0.8
Usp3-211ENSMUST00000174387 Pds5bQ4VA53 1446 aaKnown RBP20.07■□□□□ 0.8
Usp3-211ENSMUST00000174387 Iqgap2Q3UQ44 1575 aa20.03■□□□□ 0.8
Usp3-211ENSMUST00000174387 Cngb1E1AZ71 1325 aa20■□□□□ 0.79
Usp3-211ENSMUST00000174387 Top2bQ64511 1612 aa19.99■□□□□ 0.79
Usp3-211ENSMUST00000174387 Esf1Q3V1V3 845 aaKnown RBP19.96■□□□□ 0.79
Usp3-211ENSMUST00000174387 Rsf1E9PWW9 1441 aaKnown RBP19.91■□□□□ 0.78
Usp3-211ENSMUST00000174387 Ccdc88bQ4QRL3 1481 aa19.83■□□□□ 0.76
Usp3-211ENSMUST00000174387 Chic1Q8CBW7 227 aa19.8■□□□□ 0.76
Usp3-211ENSMUST00000174387 Fmn1Q05860 1466 aa19.75■□□□□ 0.75
Usp3-211ENSMUST00000174387 Wdr62Q3U3T8 1523 aa19.71■□□□□ 0.75
Usp3-211ENSMUST00000174387 Cc2d2aQ8CFW7 1633 aa19.69■□□□□ 0.74
Usp3-211ENSMUST00000174387 Frmpd1A2AKB4 1549 aa19.66■□□□□ 0.74
Usp3-211ENSMUST00000174387 Ercc6F8VPZ5 1481 aa19.66■□□□□ 0.74
Usp3-211ENSMUST00000174387 Rpgrip1Q9EPQ2 1331 aa19.6■□□□□ 0.73
Usp3-211ENSMUST00000174387 Top2aQ01320 1528 aaKnown RBP19.56■□□□□ 0.72
Usp3-211ENSMUST00000174387 TnnQ80Z71 1560 aa19.54■□□□□ 0.72
Usp3-211ENSMUST00000174387 Gab3Q8BSM5 595 aa19.47■□□□□ 0.71
Usp3-211ENSMUST00000174387 Thoc2B1AZI6 1594 aaKnown RBP19.46■□□□□ 0.71
Usp3-211ENSMUST00000174387 Lamc3Q9R0B6 1581 aa19.46■□□□□ 0.71
Usp3-211ENSMUST00000174387 Rapgef2Q8CHG7 1496 aa19.4■□□□□ 0.7
Usp3-211ENSMUST00000174387 Unc13aQ4KUS2 1712 aa19.39■□□□□ 0.69
Usp3-211ENSMUST00000174387 Acin1Q9JIX8 1338 aaKnown RBP19.38■□□□□ 0.69
Usp3-211ENSMUST00000174387 Phldb1Q6PDH0 1371 aaKnown RBP19.36■□□□□ 0.69
Usp3-211ENSMUST00000174387 Kif15Q6P9L6 1387 aa19.3■□□□□ 0.68
Usp3-211ENSMUST00000174387 Ehmt2Q9Z148 1263 aaKnown RBP19.26■□□□□ 0.67
Usp3-211ENSMUST00000174387 Fam135aQ6NS59 1506 aa19.26■□□□□ 0.67
Usp3-211ENSMUST00000174387 Cep162Q6ZQ06 1403 aa19.21■□□□□ 0.67
Usp3-211ENSMUST00000174387 Camsap1A2AHC3 1581 aa19.21■□□□□ 0.67
Usp3-211ENSMUST00000174387 Ccdc18Q640L5 1455 aa19.19■□□□□ 0.66
Usp3-211ENSMUST00000174387 Baz1bQ9Z277 1479 aa19.17■□□□□ 0.66
Usp3-211ENSMUST00000174387 Eif4g1Q6NZJ6 1600 aaKnown RBP19.15■□□□□ 0.66
Usp3-211ENSMUST00000174387 NrkQ9R0G8 1455 aa19.14■□□□□ 0.65
Usp3-211ENSMUST00000174387 Ubl4bQ9CQ84 188 aa19.1■□□□□ 0.65
Usp3-211ENSMUST00000174387 Npm2Q80W85 207 aa19.09■□□□□ 0.65
Usp3-211ENSMUST00000174387 Shroom4Q1W617 1475 aa19.07■□□□□ 0.64
Usp3-211ENSMUST00000174387 Cux2P70298 1426 aa19.06■□□□□ 0.64
Usp3-211ENSMUST00000174387 Grin2bQ01097 1482 aa19.05■□□□□ 0.64
Usp3-211ENSMUST00000174387 PtprkP35822 1457 aa19■□□□□ 0.63
Usp3-211ENSMUST00000174387 Il27Q8K3I6 234 aa19■□□□□ 0.63
Usp3-211ENSMUST00000174387 Map3k1P53349 1493 aa18.99■□□□□ 0.63
Usp3-211ENSMUST00000174387 Arhgap35Q91YM2 1499 aa18.99■□□□□ 0.63
Usp3-211ENSMUST00000174387 Npm1Q61937 292 aaKnown RBP18.96■□□□□ 0.63
Usp3-211ENSMUST00000174387 Efcab5A0JP43 1406 aa18.92■□□□□ 0.62
Usp3-211ENSMUST00000174387 Myt1lP97500 1187 aa18.92■□□□□ 0.62
Usp3-211ENSMUST00000174387 LrpprcQ6PB66 1392 aaKnown RBP18.91■□□□□ 0.62
Usp3-211ENSMUST00000174387 PogzQ8BZH4 1409 aaKnown RBP18.87■□□□□ 0.61
Usp3-211ENSMUST00000174387 Mroh2bQ7M6Y6 1581 aa18.87■□□□□ 0.61
Usp3-211ENSMUST00000174387 AqrQ8CFQ3 1481 aaKnown RBP18.83■□□□□ 0.61
Usp3-211ENSMUST00000174387 Clip1Q922J3 1391 aa18.82■□□□□ 0.6
Usp3-211ENSMUST00000174387 Mrc2Q64449 1479 aa18.81■□□□□ 0.6
Usp3-211ENSMUST00000174387 Duox2A2AQ99 1517 aa18.8■□□□□ 0.6
Usp3-211ENSMUST00000174387 Eea1Q8BL66 1411 aa18.79■□□□□ 0.6
Usp3-211ENSMUST00000174387 Dhx29Q6PGC1 1365 aaKnown RBP18.74■□□□□ 0.59
Usp3-211ENSMUST00000174387 Zeb1Q64318 1117 aa18.72■□□□□ 0.59
Usp3-211ENSMUST00000174387 Carmil1Q6EDY6 1374 aa18.7■□□□□ 0.58
Usp3-211ENSMUST00000174387 Setd5Q5XJV7 1441 aa18.67■□□□□ 0.58
Usp3-211ENSMUST00000174387 Crocc2F6XLV1 1638 aa18.67■□□□□ 0.58
Usp3-211ENSMUST00000174387 Erich3F6QRE9 1637 aa18.66■□□□□ 0.58
Usp3-211ENSMUST00000174387 NefmP08553 848 aa18.66■□□□□ 0.58
Usp3-211ENSMUST00000174387 Mier1Q5UAK0 511 aa18.66■□□□□ 0.58
Usp3-211ENSMUST00000174387 SynmQ70IV5 1561 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Arap1Q4LDD4 1452 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Kif21aQ9QXL2 1672 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Arhgef5E9Q7D5 1581 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Dnajc5bQ9CQ94 199 aa18.64■□□□□ 0.57
Usp3-211ENSMUST00000174387 Samd9lQ69Z37 1561 aa18.63■□□□□ 0.57
Usp3-211ENSMUST00000174387 Ankrd26Q811D2 1581 aa18.61■□□□□ 0.57
Usp3-211ENSMUST00000174387 UbtfP25976 765 aaKnown RBP18.59■□□□□ 0.57
Usp3-211ENSMUST00000174387 Polr1aO35134 1717 aaKnown RBP18.59■□□□□ 0.57
Usp3-211ENSMUST00000174387 Rpap1Q80TE0 1409 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 130.5 ms