RNA–Protein interactions for RNA: ENSMUST00000172775.3

Msx3-202, Transcript of Homeobox protein MSX-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx3, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-202ENSMUST00000172775 NischQ80TM9 1593 aa42.57■■■■■ 4.41
Msx3-202ENSMUST00000172775 Gm35339A0A140LHH9 1649 aa42.33■■■■■ 4.37
Msx3-202ENSMUST00000172775 Abcc9P70170 1546 aa41.33■■■■■ 4.21
Msx3-202ENSMUST00000172775 Abcc8B2RUS7 1588 aa40.66■■■■■ 4.1
Msx3-202ENSMUST00000172775 Rhox8Q6VSS7 320 aa38.52■■■■□ 3.76
Msx3-202ENSMUST00000172775 ScribQ80U72 1612 aa38.19■■■■□ 3.7
Msx3-202ENSMUST00000172775 Dcaf1Q80TR8 1506 aa37.96■■■■□ 3.67
Msx3-202ENSMUST00000172775 Rtl1Q7M732 1744 aa37.58■■■■□ 3.61
Msx3-202ENSMUST00000172775 Kdm5dQ62240 1548 aa37.36■■■■□ 3.57
Msx3-202ENSMUST00000172775 NacadQ5SWP3 1504 aa37.29■■■■□ 3.56
Msx3-202ENSMUST00000172775 Rb1cc1Q9ESK9 1588 aa37.23■■■■□ 3.55
Msx3-202ENSMUST00000172775 Ccdc180J3QNE4 1664 aa37.02■■■■□ 3.52
Msx3-202ENSMUST00000172775 Baz1aO88379 1555 aa36.84■■■■□ 3.49
Msx3-202ENSMUST00000172775 Crybg2B7ZCC2 1516 aa36.47■■■■□ 3.43
Msx3-202ENSMUST00000172775 Sycp2Q9CUU3 1500 aa36.46■■■■□ 3.43
Msx3-202ENSMUST00000172775 Zcchc6Q5BLK4 1491 aaKnown RBP36.26■■■■□ 3.4
Msx3-202ENSMUST00000172775 Smarca2Q6DIC0 1577 aa35.91■■■■□ 3.34
Msx3-202ENSMUST00000172775 Ccdc136Q3TVA9 1136 aa35.76■■■■□ 3.32
Msx3-202ENSMUST00000172775 BicraF8VPZ9 1578 aa35.65■■■■□ 3.3
Msx3-202ENSMUST00000172775 Trim41Q5NCC3 630 aa35.34■■■■□ 3.25
Msx3-202ENSMUST00000172775 Cecr2E9Q2Z1 1453 aa35.12■■■■□ 3.21
Msx3-202ENSMUST00000172775 Brd4Q9ESU6 1400 aaKnown RBP35.08■■■■□ 3.21
Msx3-202ENSMUST00000172775 HrcG5E8J6 738 aa35.08■■■■□ 3.21
Msx3-202ENSMUST00000172775 Smarca4Q3TKT4 1613 aaKnown RBP34.74■■■■□ 3.15
Msx3-202ENSMUST00000172775 Synj1Q8CHC4 1574 aa34.73■■■■□ 3.15
Msx3-202ENSMUST00000172775 CftrP26361 1476 aa34.66■■■■□ 3.14
Msx3-202ENSMUST00000172775 Cttnbp2B9EJA2 1648 aa34.56■■■■□ 3.12
Msx3-202ENSMUST00000172775 Golga3P55937 1487 aa34.41■■■■□ 3.1
Msx3-202ENSMUST00000172775 Pds5bQ4VA53 1446 aaKnown RBP34.4■■■■□ 3.1
Msx3-202ENSMUST00000172775 Atad2bE9Q166 1460 aaKnown RBP34.39■■■■□ 3.1
Msx3-202ENSMUST00000172775 Cngb1E1AZ71 1325 aa34.32■■■■□ 3.08
Msx3-202ENSMUST00000172775 Iqgap2Q3UQ44 1575 aa34.31■■■■□ 3.08
Msx3-202ENSMUST00000172775 Esf1Q3V1V3 845 aaKnown RBP34.29■■■■□ 3.08
Msx3-202ENSMUST00000172775 Cep164Q5DU05 1446 aa34.23■■■■□ 3.07
Msx3-202ENSMUST00000172775 Top2bQ64511 1612 aa34.1■■■■□ 3.05
Msx3-202ENSMUST00000172775 Rsf1E9PWW9 1441 aaKnown RBP34■■■■□ 3.03
Msx3-202ENSMUST00000172775 Chic1Q8CBW7 227 aa33.89■■■■□ 3.02
Msx3-202ENSMUST00000172775 Ccdc88bQ4QRL3 1481 aa33.88■■■■□ 3.01
Msx3-202ENSMUST00000172775 Wdr62Q3U3T8 1523 aa33.75■■■□□ 2.99
Msx3-202ENSMUST00000172775 Ercc6F8VPZ5 1481 aa33.72■■■□□ 2.99
Msx3-202ENSMUST00000172775 Frmpd1A2AKB4 1549 aa33.72■■■□□ 2.99
Msx3-202ENSMUST00000172775 Cc2d2aQ8CFW7 1633 aa33.69■■■□□ 2.98
Msx3-202ENSMUST00000172775 Fmn1Q05860 1466 aa33.69■■■□□ 2.98
Msx3-202ENSMUST00000172775 Gab3Q8BSM5 595 aa33.41■■■□□ 2.94
Msx3-202ENSMUST00000172775 Thoc2B1AZI6 1594 aaKnown RBP33.4■■■□□ 2.94
Msx3-202ENSMUST00000172775 TnnQ80Z71 1560 aa33.35■■■□□ 2.93
Msx3-202ENSMUST00000172775 Top2aQ01320 1528 aaKnown RBP33.35■■■□□ 2.93
Msx3-202ENSMUST00000172775 Unc13aQ4KUS2 1712 aa33.27■■■□□ 2.92
Msx3-202ENSMUST00000172775 Lamc3Q9R0B6 1581 aa33.25■■■□□ 2.91
Msx3-202ENSMUST00000172775 Phldb1Q6PDH0 1371 aaKnown RBP33.21■■■□□ 2.91
Msx3-202ENSMUST00000172775 Kif15Q6P9L6 1387 aa33.12■■■□□ 2.89
Msx3-202ENSMUST00000172775 Rapgef2Q8CHG7 1496 aa33.06■■■□□ 2.88
Msx3-202ENSMUST00000172775 Fam135aQ6NS59 1506 aa33■■■□□ 2.87
Msx3-202ENSMUST00000172775 Rpgrip1Q9EPQ2 1331 aa32.98■■■□□ 2.87
Msx3-202ENSMUST00000172775 Ehmt2Q9Z148 1263 aaKnown RBP32.98■■■□□ 2.87
Msx3-202ENSMUST00000172775 Ubl4bQ9CQ84 188 aa32.87■■■□□ 2.85
Msx3-202ENSMUST00000172775 Camsap1A2AHC3 1581 aa32.84■■■□□ 2.85
Msx3-202ENSMUST00000172775 Ccdc18Q640L5 1455 aa32.82■■■□□ 2.85
Msx3-202ENSMUST00000172775 Acin1Q9JIX8 1338 aaKnown RBP32.8■■■□□ 2.84
Msx3-202ENSMUST00000172775 Cep162Q6ZQ06 1403 aa32.78■■■□□ 2.84
Msx3-202ENSMUST00000172775 Npm2Q80W85 207 aa32.73■■■□□ 2.83
Msx3-202ENSMUST00000172775 Cux2P70298 1426 aa32.71■■■□□ 2.83
Msx3-202ENSMUST00000172775 Il27Q8K3I6 234 aa32.71■■■□□ 2.83
Msx3-202ENSMUST00000172775 Baz1bQ9Z277 1479 aa32.69■■■□□ 2.82
Msx3-202ENSMUST00000172775 NrkQ9R0G8 1455 aa32.66■■■□□ 2.82
Msx3-202ENSMUST00000172775 Eif4g1Q6NZJ6 1600 aaKnown RBP32.6■■■□□ 2.81
Msx3-202ENSMUST00000172775 Grin2bQ01097 1482 aa32.57■■■□□ 2.81
Msx3-202ENSMUST00000172775 Npm1Q61937 292 aaKnown RBP32.57■■■□□ 2.8
Msx3-202ENSMUST00000172775 Shroom4Q1W617 1475 aa32.56■■■□□ 2.8
Msx3-202ENSMUST00000172775 PtprkP35822 1457 aa32.53■■■□□ 2.8
Msx3-202ENSMUST00000172775 Myt1lP97500 1187 aa32.47■■■□□ 2.79
Msx3-202ENSMUST00000172775 Arhgap35Q91YM2 1499 aa32.43■■■□□ 2.78
Msx3-202ENSMUST00000172775 LrpprcQ6PB66 1392 aaKnown RBP32.39■■■□□ 2.77
Msx3-202ENSMUST00000172775 Map3k1P53349 1493 aa32.34■■■□□ 2.77
Msx3-202ENSMUST00000172775 Efcab5A0JP43 1406 aa32.32■■■□□ 2.76
Msx3-202ENSMUST00000172775 Dnajc5bQ9CQ94 199 aa32.3■■■□□ 2.76
Msx3-202ENSMUST00000172775 PogzQ8BZH4 1409 aaKnown RBP32.3■■■□□ 2.76
Msx3-202ENSMUST00000172775 Mrc2Q64449 1479 aa32.29■■■□□ 2.76
Msx3-202ENSMUST00000172775 Mroh2bQ7M6Y6 1581 aa32.22■■■□□ 2.75
Msx3-202ENSMUST00000172775 Duox2A2AQ99 1517 aa32.2■■■□□ 2.75
Msx3-202ENSMUST00000172775 Zeb1Q64318 1117 aa32.15■■■□□ 2.74
Msx3-202ENSMUST00000172775 Clip1Q922J3 1391 aa32.15■■■□□ 2.74
Msx3-202ENSMUST00000172775 Dhx29Q6PGC1 1365 aaKnown RBP32.14■■■□□ 2.73
Msx3-202ENSMUST00000172775 AqrQ8CFQ3 1481 aaKnown RBP32.09■■■□□ 2.73
Msx3-202ENSMUST00000172775 Eea1Q8BL66 1411 aa32.04■■■□□ 2.72
Msx3-202ENSMUST00000172775 Kif21aQ9QXL2 1672 aa32.02■■■□□ 2.72
Msx3-202ENSMUST00000172775 Crocc2F6XLV1 1638 aa31.98■■■□□ 2.71
Msx3-202ENSMUST00000172775 Carmil1Q6EDY6 1374 aa31.94■■■□□ 2.7
Msx3-202ENSMUST00000172775 Samd9lQ69Z37 1561 aa31.91■■■□□ 2.7
Msx3-202ENSMUST00000172775 Setd5Q5XJV7 1441 aa31.91■■■□□ 2.7
Msx3-202ENSMUST00000172775 SynmQ70IV5 1561 aa31.88■■■□□ 2.69
Msx3-202ENSMUST00000172775 Arap1Q4LDD4 1452 aa31.83■■■□□ 2.69
Msx3-202ENSMUST00000172775 UbtfP25976 765 aaKnown RBP31.81■■■□□ 2.68
Msx3-202ENSMUST00000172775 Mier1Q5UAK0 511 aa31.8■■■□□ 2.68
Msx3-202ENSMUST00000172775 Erich3F6QRE9 1637 aa31.79■■■□□ 2.68
Msx3-202ENSMUST00000172775 Arhgef5E9Q7D5 1581 aa31.78■■■□□ 2.68
Msx3-202ENSMUST00000172775 Ankrd26Q811D2 1581 aa31.78■■■□□ 2.68
Msx3-202ENSMUST00000172775 Rad54l2Q99NG0 1466 aa31.71■■■□□ 2.67
Msx3-202ENSMUST00000172775 Plekhg3Q4VAC9 1341 aa31.71■■■□□ 2.67
Msx3-202ENSMUST00000172775 Polr1aO35134 1717 aaKnown RBP31.7■■■□□ 2.67
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms