RNA–Protein interactions for RNA: ENSMUST00000134009.8

Pcdh15-217, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 3,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-217ENSMUST00000134009 Gm35339A0A140LHH9 1649 aa13.91□□□□□ -0.18
Pcdh15-217ENSMUST00000134009 NischQ80TM9 1593 aa13.19□□□□□ -0.3
Pcdh15-217ENSMUST00000134009 Abcc9P70170 1546 aa12.77□□□□□ -0.36
Pcdh15-217ENSMUST00000134009 Abcc8B2RUS7 1588 aa12.56□□□□□ -0.4
Pcdh15-217ENSMUST00000134009 Ccdc180J3QNE4 1664 aa12.41□□□□□ -0.42
Pcdh15-217ENSMUST00000134009 Rhox8Q6VSS7 320 aa12.21□□□□□ -0.46
Pcdh15-217ENSMUST00000134009 Dcaf1Q80TR8 1506 aa12.2□□□□□ -0.46
Pcdh15-217ENSMUST00000134009 Rtl1Q7M732 1744 aa11.95□□□□□ -0.5
Pcdh15-217ENSMUST00000134009 ScribQ80U72 1612 aa11.83□□□□□ -0.52
Pcdh15-217ENSMUST00000134009 Crybg2B7ZCC2 1516 aa11.61□□□□□ -0.55
Pcdh15-217ENSMUST00000134009 NacadQ5SWP3 1504 aa11.55□□□□□ -0.56
Pcdh15-217ENSMUST00000134009 Kdm5dQ62240 1548 aa11.54□□□□□ -0.56
Pcdh15-217ENSMUST00000134009 Rb1cc1Q9ESK9 1588 aa11.53□□□□□ -0.56
Pcdh15-217ENSMUST00000134009 Baz1aO88379 1555 aa11.4□□□□□ -0.58
Pcdh15-217ENSMUST00000134009 Zcchc6Q5BLK4 1491 aaKnown RBP11.28□□□□□ -0.6
Pcdh15-217ENSMUST00000134009 Ccdc136Q3TVA9 1136 aa11.27□□□□□ -0.6
Pcdh15-217ENSMUST00000134009 Sycp2Q9CUU3 1500 aa11.27□□□□□ -0.61
Pcdh15-217ENSMUST00000134009 Trim41Q5NCC3 630 aa11.15□□□□□ -0.62
Pcdh15-217ENSMUST00000134009 Smarca2Q6DIC0 1577 aa11.09□□□□□ -0.63
Pcdh15-217ENSMUST00000134009 HrcG5E8J6 738 aa11.04□□□□□ -0.64
Pcdh15-217ENSMUST00000134009 Brd4Q9ESU6 1400 aaKnown RBP10.97□□□□□ -0.65
Pcdh15-217ENSMUST00000134009 BicraF8VPZ9 1578 aa10.95□□□□□ -0.66
Pcdh15-217ENSMUST00000134009 Cecr2E9Q2Z1 1453 aa10.88□□□□□ -0.67
Pcdh15-217ENSMUST00000134009 Cngb1E1AZ71 1325 aa10.85□□□□□ -0.67
Pcdh15-217ENSMUST00000134009 Baz1bQ9Z277 1479 aa10.84□□□□□ -0.67
Pcdh15-217ENSMUST00000134009 Esf1Q3V1V3 845 aaKnown RBP10.84□□□□□ -0.67
Pcdh15-217ENSMUST00000134009 CftrP26361 1476 aa10.76□□□□□ -0.69
Pcdh15-217ENSMUST00000134009 Synj1Q8CHC4 1574 aa10.75□□□□□ -0.69
Pcdh15-217ENSMUST00000134009 Smarca4Q3TKT4 1613 aaKnown RBP10.74□□□□□ -0.69
Pcdh15-217ENSMUST00000134009 Golga3P55937 1487 aa10.74□□□□□ -0.69
Pcdh15-217ENSMUST00000134009 Cep164Q5DU05 1446 aa10.72□□□□□ -0.69
Pcdh15-217ENSMUST00000134009 Pds5bQ4VA53 1446 aaKnown RBP10.7□□□□□ -0.7
Pcdh15-217ENSMUST00000134009 Cttnbp2B9EJA2 1648 aa10.68□□□□□ -0.7
Pcdh15-217ENSMUST00000134009 Atad2bE9Q166 1460 aaKnown RBP10.68□□□□□ -0.7
Pcdh15-217ENSMUST00000134009 Gpatch8A2A6A1 1505 aa10.66□□□□□ -0.7
Pcdh15-217ENSMUST00000134009 Top2bQ64511 1612 aa10.62□□□□□ -0.71
Pcdh15-217ENSMUST00000134009 Chic1Q8CBW7 227 aa10.61□□□□□ -0.71
Pcdh15-217ENSMUST00000134009 Iqgap2Q3UQ44 1575 aa10.61□□□□□ -0.71
Pcdh15-217ENSMUST00000134009 Rsf1E9PWW9 1441 aaKnown RBP10.61□□□□□ -0.71
Pcdh15-217ENSMUST00000134009 Gab3Q8BSM5 595 aa10.58□□□□□ -0.72
Pcdh15-217ENSMUST00000134009 Ccdc88bQ4QRL3 1481 aa10.55□□□□□ -0.72
Pcdh15-217ENSMUST00000134009 TnnQ80Z71 1560 aa10.54□□□□□ -0.72
Pcdh15-217ENSMUST00000134009 Rpgrip1Q9EPQ2 1331 aa10.53□□□□□ -0.72
Pcdh15-217ENSMUST00000134009 Thoc2B1AZI6 1594 aaKnown RBP10.51□□□□□ -0.73
Pcdh15-217ENSMUST00000134009 Ercc6F8VPZ5 1481 aa10.51□□□□□ -0.73
Pcdh15-217ENSMUST00000134009 Unc13aQ4KUS2 1712 aa10.51□□□□□ -0.73
Pcdh15-217ENSMUST00000134009 Fmn1Q05860 1466 aa10.5□□□□□ -0.73
Pcdh15-217ENSMUST00000134009 Ehmt2Q9Z148 1263 aaKnown RBP10.48□□□□□ -0.73
Pcdh15-217ENSMUST00000134009 Frmpd1A2AKB4 1549 aa10.43□□□□□ -0.74
Pcdh15-217ENSMUST00000134009 Wdr62Q3U3T8 1523 aa10.42□□□□□ -0.74
Pcdh15-217ENSMUST00000134009 Acin1Q9JIX8 1338 aaKnown RBP10.39□□□□□ -0.75
Pcdh15-217ENSMUST00000134009 Cc2d2aQ8CFW7 1633 aa10.38□□□□□ -0.75
Pcdh15-217ENSMUST00000134009 Npm2Q80W85 207 aa10.38□□□□□ -0.75
Pcdh15-217ENSMUST00000134009 Kif15Q6P9L6 1387 aa10.36□□□□□ -0.75
Pcdh15-217ENSMUST00000134009 Phldb1Q6PDH0 1371 aaKnown RBP10.34□□□□□ -0.75
Pcdh15-217ENSMUST00000134009 Top2aQ01320 1528 aaKnown RBP10.34□□□□□ -0.75
Pcdh15-217ENSMUST00000134009 Il27Q8K3I6 234 aa10.33□□□□□ -0.76
Pcdh15-217ENSMUST00000134009 Fam135aQ6NS59 1506 aa10.32□□□□□ -0.76
Pcdh15-217ENSMUST00000134009 Ubl4bQ9CQ84 188 aa10.31□□□□□ -0.76
Pcdh15-217ENSMUST00000134009 Eif4g1Q6NZJ6 1600 aaKnown RBP10.3□□□□□ -0.76
Pcdh15-217ENSMUST00000134009 Myt1lP97500 1187 aa10.3□□□□□ -0.76
Pcdh15-217ENSMUST00000134009 Rapgef2Q8CHG7 1496 aa10.29□□□□□ -0.76
Pcdh15-217ENSMUST00000134009 Lamc3Q9R0B6 1581 aa10.27□□□□□ -0.77
Pcdh15-217ENSMUST00000134009 Ccdc18Q640L5 1455 aa10.26□□□□□ -0.77
Pcdh15-217ENSMUST00000134009 Npm1Q61937 292 aaKnown RBP10.25□□□□□ -0.77
Pcdh15-217ENSMUST00000134009 Cep162Q6ZQ06 1403 aa10.24□□□□□ -0.77
Pcdh15-217ENSMUST00000134009 Zeb1Q64318 1117 aa10.22□□□□□ -0.77
Pcdh15-217ENSMUST00000134009 Cux2P70298 1426 aa10.2□□□□□ -0.78
Pcdh15-217ENSMUST00000134009 Camsap1A2AHC3 1581 aa10.16□□□□□ -0.78
Pcdh15-217ENSMUST00000134009 NrkQ9R0G8 1455 aa10.15□□□□□ -0.78
Pcdh15-217ENSMUST00000134009 Shroom4Q1W617 1475 aa10.13□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 Clip1Q922J3 1391 aa10.12□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 Grin2bQ01097 1482 aa10.12□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 LrpprcQ6PB66 1392 aaKnown RBP10.11□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 PtprkP35822 1457 aa10.1□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 UbtfP25976 765 aaKnown RBP10.09□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 Arhgap35Q91YM2 1499 aa10.09□□□□□ -0.79
Pcdh15-217ENSMUST00000134009 Efcab5A0JP43 1406 aa10.07□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Map3k1P53349 1493 aa10.06□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Eea1Q8BL66 1411 aa10.06□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 NefmP08553 848 aa10.05□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 PogzQ8BZH4 1409 aaKnown RBP10.05□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Mier1Q5UAK0 511 aa10.04□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Kif21aQ9QXL2 1672 aa10.03□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Dhx29Q6PGC1 1365 aaKnown RBP10.03□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Setd5Q5XJV7 1441 aa10.03□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Mrc2Q64449 1479 aa10.02□□□□□ -0.8
Pcdh15-217ENSMUST00000134009 Pbrm1Q8BSQ9 1634 aaKnown RBP10.02□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Duox2A2AQ99 1517 aa10.01□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Mroh2bQ7M6Y6 1581 aa10.01□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Plekhg3Q4VAC9 1341 aa10□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Ap3b1Q9Z1T1 1105 aa10□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Dnajc5bQ9CQ94 199 aa9.99□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Carmil1Q6EDY6 1374 aa9.99□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 AqrQ8CFQ3 1481 aaKnown RBP9.97□□□□□ -0.81
Pcdh15-217ENSMUST00000134009 Erich3F6QRE9 1637 aa9.95□□□□□ -0.82
Pcdh15-217ENSMUST00000134009 SynmQ70IV5 1561 aa9.92□□□□□ -0.82
Pcdh15-217ENSMUST00000134009 Arap1Q4LDD4 1452 aa9.91□□□□□ -0.82
Pcdh15-217ENSMUST00000134009 Crocc2F6XLV1 1638 aa9.9□□□□□ -0.82
Pcdh15-217ENSMUST00000134009 Rpap1Q80TE0 1409 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms