RNA–Protein interactions for RNA: ENSMUST00000117507.8

Ecm1-202, Transcript of Extracellular matrix protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ecm1, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1-202ENSMUST00000117507 NischQ80TM9 1593 aa28.34■■■□□ 2.13
Ecm1-202ENSMUST00000117507 Gm35339A0A140LHH9 1649 aa28.26■■■□□ 2.11
Ecm1-202ENSMUST00000117507 Abcc9P70170 1546 aa27.56■■■□□ 2
Ecm1-202ENSMUST00000117507 Abcc8B2RUS7 1588 aa27.09■■□□□ 1.93
Ecm1-202ENSMUST00000117507 Rhox8Q6VSS7 320 aa25.49■■□□□ 1.67
Ecm1-202ENSMUST00000117507 ScribQ80U72 1612 aa25.44■■□□□ 1.66
Ecm1-202ENSMUST00000117507 Dcaf1Q80TR8 1506 aa25.35■■□□□ 1.65
Ecm1-202ENSMUST00000117507 Rtl1Q7M732 1744 aa25.04■■□□□ 1.6
Ecm1-202ENSMUST00000117507 Kdm5dQ62240 1548 aa24.89■■□□□ 1.58
Ecm1-202ENSMUST00000117507 NacadQ5SWP3 1504 aa24.85■■□□□ 1.57
Ecm1-202ENSMUST00000117507 Rb1cc1Q9ESK9 1588 aa24.78■■□□□ 1.56
Ecm1-202ENSMUST00000117507 Ccdc180J3QNE4 1664 aa24.73■■□□□ 1.55
Ecm1-202ENSMUST00000117507 Baz1aO88379 1555 aa24.55■■□□□ 1.52
Ecm1-202ENSMUST00000117507 Crybg2B7ZCC2 1516 aa24.34■■□□□ 1.49
Ecm1-202ENSMUST00000117507 Sycp2Q9CUU3 1500 aa24.3■■□□□ 1.48
Ecm1-202ENSMUST00000117507 Zcchc6Q5BLK4 1491 aaKnown RBP24.13■■□□□ 1.45
Ecm1-202ENSMUST00000117507 Smarca2Q6DIC0 1577 aa23.93■■□□□ 1.42
Ecm1-202ENSMUST00000117507 BicraF8VPZ9 1578 aa23.74■■□□□ 1.39
Ecm1-202ENSMUST00000117507 Ccdc136Q3TVA9 1136 aa23.65■■□□□ 1.38
Ecm1-202ENSMUST00000117507 Trim41Q5NCC3 630 aa23.45■■□□□ 1.35
Ecm1-202ENSMUST00000117507 Brd4Q9ESU6 1400 aaKnown RBP23.36■■□□□ 1.33
Ecm1-202ENSMUST00000117507 Cecr2E9Q2Z1 1453 aa23.34■■□□□ 1.33
Ecm1-202ENSMUST00000117507 HrcG5E8J6 738 aa23.27■■□□□ 1.32
Ecm1-202ENSMUST00000117507 Smarca4Q3TKT4 1613 aaKnown RBP23.14■■□□□ 1.3
Ecm1-202ENSMUST00000117507 Synj1Q8CHC4 1574 aa23.1■■□□□ 1.29
Ecm1-202ENSMUST00000117507 CftrP26361 1476 aa23.07■■□□□ 1.28
Ecm1-202ENSMUST00000117507 Cttnbp2B9EJA2 1648 aa23.03■■□□□ 1.28
Ecm1-202ENSMUST00000117507 Pds5bQ4VA53 1446 aaKnown RBP22.93■■□□□ 1.26
Ecm1-202ENSMUST00000117507 Atad2bE9Q166 1460 aaKnown RBP22.93■■□□□ 1.26
Ecm1-202ENSMUST00000117507 Golga3P55937 1487 aa22.89■■□□□ 1.25
Ecm1-202ENSMUST00000117507 Iqgap2Q3UQ44 1575 aa22.85■■□□□ 1.25
Ecm1-202ENSMUST00000117507 Cep164Q5DU05 1446 aa22.76■■□□□ 1.23
Ecm1-202ENSMUST00000117507 Cngb1E1AZ71 1325 aa22.71■■□□□ 1.23
Ecm1-202ENSMUST00000117507 Esf1Q3V1V3 845 aaKnown RBP22.71■■□□□ 1.23
Ecm1-202ENSMUST00000117507 Top2bQ64511 1612 aa22.71■■□□□ 1.23
Ecm1-202ENSMUST00000117507 Rsf1E9PWW9 1441 aaKnown RBP22.57■■□□□ 1.2
Ecm1-202ENSMUST00000117507 Wdr62Q3U3T8 1523 aa22.5■■□□□ 1.19
Ecm1-202ENSMUST00000117507 Dnajc5bQ9CQ94 199 aa22.49■■□□□ 1.19
Ecm1-202ENSMUST00000117507 Ccdc88bQ4QRL3 1481 aa22.48■■□□□ 1.19
Ecm1-202ENSMUST00000117507 Ercc6F8VPZ5 1481 aa22.47■■□□□ 1.19
Ecm1-202ENSMUST00000117507 Frmpd1A2AKB4 1549 aa22.44■■□□□ 1.18
Ecm1-202ENSMUST00000117507 Fmn1Q05860 1466 aa22.43■■□□□ 1.18
Ecm1-202ENSMUST00000117507 Chic1Q8CBW7 227 aa22.43■■□□□ 1.18
Ecm1-202ENSMUST00000117507 Cc2d2aQ8CFW7 1633 aa22.39■■□□□ 1.17
Ecm1-202ENSMUST00000117507 Thoc2B1AZI6 1594 aaKnown RBP22.29■■□□□ 1.16
Ecm1-202ENSMUST00000117507 TnnQ80Z71 1560 aa22.24■■□□□ 1.15
Ecm1-202ENSMUST00000117507 Top2aQ01320 1528 aaKnown RBP22.21■■□□□ 1.15
Ecm1-202ENSMUST00000117507 Lamc3Q9R0B6 1581 aa22.16■■□□□ 1.14
Ecm1-202ENSMUST00000117507 Unc13aQ4KUS2 1712 aa22.13■■□□□ 1.13
Ecm1-202ENSMUST00000117507 Phldb1Q6PDH0 1371 aaKnown RBP22.11■■□□□ 1.13
Ecm1-202ENSMUST00000117507 Gab3Q8BSM5 595 aa22.06■■□□□ 1.12
Ecm1-202ENSMUST00000117507 Fam135aQ6NS59 1506 aa22.03■■□□□ 1.12
Ecm1-202ENSMUST00000117507 Kif15Q6P9L6 1387 aa22.01■■□□□ 1.11
Ecm1-202ENSMUST00000117507 Rapgef2Q8CHG7 1496 aa21.98■■□□□ 1.11
Ecm1-202ENSMUST00000117507 Baz1bQ9Z277 1479 aa21.92■■□□□ 1.1
Ecm1-202ENSMUST00000117507 Camsap1A2AHC3 1581 aa21.87■■□□□ 1.09
Ecm1-202ENSMUST00000117507 Rpgrip1Q9EPQ2 1331 aa21.87■■□□□ 1.09
Ecm1-202ENSMUST00000117507 Ccdc18Q640L5 1455 aa21.85■■□□□ 1.09
Ecm1-202ENSMUST00000117507 Ubl4bQ9CQ84 188 aa21.81■■□□□ 1.08
Ecm1-202ENSMUST00000117507 Cep162Q6ZQ06 1403 aa21.78■■□□□ 1.08
Ecm1-202ENSMUST00000117507 NrkQ9R0G8 1455 aa21.76■■□□□ 1.07
Ecm1-202ENSMUST00000117507 Cux2P70298 1426 aa21.76■■□□□ 1.07
Ecm1-202ENSMUST00000117507 Eif4g1Q6NZJ6 1600 aaKnown RBP21.71■■□□□ 1.07
Ecm1-202ENSMUST00000117507 Acin1Q9JIX8 1338 aaKnown RBP21.71■■□□□ 1.07
Ecm1-202ENSMUST00000117507 Ehmt2Q9Z148 1263 aaKnown RBP21.7■■□□□ 1.06
Ecm1-202ENSMUST00000117507 Grin2bQ01097 1482 aa21.68■■□□□ 1.06
Ecm1-202ENSMUST00000117507 Npm2Q80W85 207 aa21.68■■□□□ 1.06
Ecm1-202ENSMUST00000117507 Shroom4Q1W617 1475 aa21.68■■□□□ 1.06
Ecm1-202ENSMUST00000117507 Il27Q8K3I6 234 aa21.64■■□□□ 1.05
Ecm1-202ENSMUST00000117507 Npm1Q61937 292 aaKnown RBP21.61■■□□□ 1.05
Ecm1-202ENSMUST00000117507 PtprkP35822 1457 aa21.6■■□□□ 1.05
Ecm1-202ENSMUST00000117507 Map3k1P53349 1493 aa21.56■■□□□ 1.04
Ecm1-202ENSMUST00000117507 Arhgap35Q91YM2 1499 aa21.56■■□□□ 1.04
Ecm1-202ENSMUST00000117507 LrpprcQ6PB66 1392 aaKnown RBP21.55■■□□□ 1.04
Ecm1-202ENSMUST00000117507 Mrc2Q64449 1479 aa21.52■■□□□ 1.04
Ecm1-202ENSMUST00000117507 Efcab5A0JP43 1406 aa21.52■■□□□ 1.04
Ecm1-202ENSMUST00000117507 PogzQ8BZH4 1409 aaKnown RBP21.51■■□□□ 1.03
Ecm1-202ENSMUST00000117507 Myt1lP97500 1187 aa21.46■■□□□ 1.03
Ecm1-202ENSMUST00000117507 Mroh2bQ7M6Y6 1581 aa21.44■■□□□ 1.02
Ecm1-202ENSMUST00000117507 Duox2A2AQ99 1517 aa21.42■■□□□ 1.02
Ecm1-202ENSMUST00000117507 AqrQ8CFQ3 1481 aaKnown RBP21.39■■□□□ 1.01
Ecm1-202ENSMUST00000117507 Dhx29Q6PGC1 1365 aaKnown RBP21.37■■□□□ 1.01
Ecm1-202ENSMUST00000117507 Dnajc5P60904 198 aa21.37■■□□□ 1.01
Ecm1-202ENSMUST00000117507 Clip1Q922J3 1391 aa21.35■■□□□ 1.01
Ecm1-202ENSMUST00000117507 Kif21aQ9QXL2 1672 aa21.31■■□□□ 1
Ecm1-202ENSMUST00000117507 Eea1Q8BL66 1411 aa21.3■■□□□ 1
Ecm1-202ENSMUST00000117507 Crocc2F6XLV1 1638 aa21.3■■□□□ 1
Ecm1-202ENSMUST00000117507 Zeb1Q64318 1117 aa21.29■■□□□ 1
Ecm1-202ENSMUST00000117507 Carmil1Q6EDY6 1374 aa21.25■□□□□ 0.99
Ecm1-202ENSMUST00000117507 Samd9lQ69Z37 1561 aa21.24■□□□□ 0.99
Ecm1-202ENSMUST00000117507 SynmQ70IV5 1561 aa21.24■□□□□ 0.99
Ecm1-202ENSMUST00000117507 Setd5Q5XJV7 1441 aa21.18■□□□□ 0.98
Ecm1-202ENSMUST00000117507 Erich3F6QRE9 1637 aa21.17■□□□□ 0.98
Ecm1-202ENSMUST00000117507 Arap1Q4LDD4 1452 aa21.16■□□□□ 0.98
Ecm1-202ENSMUST00000117507 Arhgef5E9Q7D5 1581 aa21.13■□□□□ 0.97
Ecm1-202ENSMUST00000117507 Ankrd26Q811D2 1581 aa21.13■□□□□ 0.97
Ecm1-202ENSMUST00000117507 Polr1aO35134 1717 aaKnown RBP21.12■□□□□ 0.97
Ecm1-202ENSMUST00000117507 Rpap1Q80TE0 1409 aa21.1■□□□□ 0.97
Ecm1-202ENSMUST00000117507 Plb1Q3TTY0 1478 aa21.07■□□□□ 0.96
Ecm1-202ENSMUST00000117507 Rad54l2Q99NG0 1466 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms