RNA–Protein interactions for RNA: ENSMUST00000117346.1

Best1-201, Transcript of Bestrophin-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Best1, Length 2,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Best1-201ENSMUST00000117346 NischQ80TM9 1593 aa22.7■■□□□ 1.22
Best1-201ENSMUST00000117346 Gm35339A0A140LHH9 1649 aa22.48■■□□□ 1.19
Best1-201ENSMUST00000117346 Abcc9P70170 1546 aa22.04■■□□□ 1.12
Best1-201ENSMUST00000117346 Abcc8B2RUS7 1588 aa21.62■■□□□ 1.05
Best1-201ENSMUST00000117346 Rhox8Q6VSS7 320 aa20.7■□□□□ 0.9
Best1-201ENSMUST00000117346 Rtl1Q7M732 1744 aa20.3■□□□□ 0.84
Best1-201ENSMUST00000117346 ScribQ80U72 1612 aa20.26■□□□□ 0.83
Best1-201ENSMUST00000117346 Dcaf1Q80TR8 1506 aa20.2■□□□□ 0.82
Best1-201ENSMUST00000117346 Rb1cc1Q9ESK9 1588 aa19.88■□□□□ 0.77
Best1-201ENSMUST00000117346 Kdm5dQ62240 1548 aa19.86■□□□□ 0.77
Best1-201ENSMUST00000117346 Ccdc180J3QNE4 1664 aa19.82■□□□□ 0.76
Best1-201ENSMUST00000117346 NacadQ5SWP3 1504 aa19.78■□□□□ 0.76
Best1-201ENSMUST00000117346 Baz1aO88379 1555 aa19.65■□□□□ 0.74
Best1-201ENSMUST00000117346 Zcchc6Q5BLK4 1491 aaKnown RBP19.52■□□□□ 0.72
Best1-201ENSMUST00000117346 Crybg2B7ZCC2 1516 aa19.39■□□□□ 0.7
Best1-201ENSMUST00000117346 Sycp2Q9CUU3 1500 aa19.34■□□□□ 0.69
Best1-201ENSMUST00000117346 Ccdc136Q3TVA9 1136 aa19.19■□□□□ 0.66
Best1-201ENSMUST00000117346 Smarca2Q6DIC0 1577 aa19.17■□□□□ 0.66
Best1-201ENSMUST00000117346 Trim41Q5NCC3 630 aa18.93■□□□□ 0.62
Best1-201ENSMUST00000117346 HrcG5E8J6 738 aa18.91■□□□□ 0.62
Best1-201ENSMUST00000117346 BicraF8VPZ9 1578 aa18.89■□□□□ 0.61
Best1-201ENSMUST00000117346 Brd4Q9ESU6 1400 aaKnown RBP18.74■□□□□ 0.59
Best1-201ENSMUST00000117346 Cecr2E9Q2Z1 1453 aa18.71■□□□□ 0.59
Best1-201ENSMUST00000117346 Synj1Q8CHC4 1574 aa18.54■□□□□ 0.56
Best1-201ENSMUST00000117346 CftrP26361 1476 aa18.47■□□□□ 0.55
Best1-201ENSMUST00000117346 Smarca4Q3TKT4 1613 aaKnown RBP18.46■□□□□ 0.55
Best1-201ENSMUST00000117346 Cep164Q5DU05 1446 aa18.45■□□□□ 0.54
Best1-201ENSMUST00000117346 Cttnbp2B9EJA2 1648 aa18.43■□□□□ 0.54
Best1-201ENSMUST00000117346 Cngb1E1AZ71 1325 aa18.42■□□□□ 0.54
Best1-201ENSMUST00000117346 Golga3P55937 1487 aa18.41■□□□□ 0.54
Best1-201ENSMUST00000117346 Esf1Q3V1V3 845 aaKnown RBP18.33■□□□□ 0.52
Best1-201ENSMUST00000117346 Rsf1E9PWW9 1441 aaKnown RBP18.26■□□□□ 0.51
Best1-201ENSMUST00000117346 Top2bQ64511 1612 aa18.23■□□□□ 0.51
Best1-201ENSMUST00000117346 Iqgap2Q3UQ44 1575 aa18.23■□□□□ 0.51
Best1-201ENSMUST00000117346 Atad2bE9Q166 1460 aaKnown RBP18.22■□□□□ 0.51
Best1-201ENSMUST00000117346 Pds5bQ4VA53 1446 aaKnown RBP18.2■□□□□ 0.5
Best1-201ENSMUST00000117346 Chic1Q8CBW7 227 aa18.19■□□□□ 0.5
Best1-201ENSMUST00000117346 Ccdc88bQ4QRL3 1481 aa18.17■□□□□ 0.5
Best1-201ENSMUST00000117346 Rpgrip1Q9EPQ2 1331 aa18.12■□□□□ 0.49
Best1-201ENSMUST00000117346 Cc2d2aQ8CFW7 1633 aa18.04■□□□□ 0.48
Best1-201ENSMUST00000117346 Fmn1Q05860 1466 aa18.01■□□□□ 0.47
Best1-201ENSMUST00000117346 Gab3Q8BSM5 595 aa17.99■□□□□ 0.47
Best1-201ENSMUST00000117346 Ehmt2Q9Z148 1263 aaKnown RBP17.98■□□□□ 0.47
Best1-201ENSMUST00000117346 Acin1Q9JIX8 1338 aaKnown RBP17.94■□□□□ 0.46
Best1-201ENSMUST00000117346 Wdr62Q3U3T8 1523 aa17.9■□□□□ 0.46
Best1-201ENSMUST00000117346 Frmpd1A2AKB4 1549 aa17.88■□□□□ 0.45
Best1-201ENSMUST00000117346 Ercc6F8VPZ5 1481 aa17.87■□□□□ 0.45
Best1-201ENSMUST00000117346 Top2aQ01320 1528 aaKnown RBP17.85■□□□□ 0.45
Best1-201ENSMUST00000117346 TnnQ80Z71 1560 aa17.77■□□□□ 0.44
Best1-201ENSMUST00000117346 Rapgef2Q8CHG7 1496 aa17.73■□□□□ 0.43
Best1-201ENSMUST00000117346 Lamc3Q9R0B6 1581 aa17.69■□□□□ 0.42
Best1-201ENSMUST00000117346 Unc13aQ4KUS2 1712 aa17.66■□□□□ 0.42
Best1-201ENSMUST00000117346 Thoc2B1AZI6 1594 aaKnown RBP17.63■□□□□ 0.41
Best1-201ENSMUST00000117346 Kif15Q6P9L6 1387 aa17.62■□□□□ 0.41
Best1-201ENSMUST00000117346 Cep162Q6ZQ06 1403 aa17.59■□□□□ 0.41
Best1-201ENSMUST00000117346 Phldb1Q6PDH0 1371 aaKnown RBP17.58■□□□□ 0.4
Best1-201ENSMUST00000117346 Npm2Q80W85 207 aa17.56■□□□□ 0.4
Best1-201ENSMUST00000117346 Camsap1A2AHC3 1581 aa17.5■□□□□ 0.39
Best1-201ENSMUST00000117346 Ccdc18Q640L5 1455 aa17.49■□□□□ 0.39
Best1-201ENSMUST00000117346 Il27Q8K3I6 234 aa17.46■□□□□ 0.39
Best1-201ENSMUST00000117346 Eif4g1Q6NZJ6 1600 aaKnown RBP17.46■□□□□ 0.39
Best1-201ENSMUST00000117346 Myt1lP97500 1187 aa17.46■□□□□ 0.39
Best1-201ENSMUST00000117346 Fam135aQ6NS59 1506 aa17.44■□□□□ 0.38
Best1-201ENSMUST00000117346 NrkQ9R0G8 1455 aa17.42■□□□□ 0.38
Best1-201ENSMUST00000117346 Ubl4bQ9CQ84 188 aa17.41■□□□□ 0.38
Best1-201ENSMUST00000117346 Shroom4Q1W617 1475 aa17.39■□□□□ 0.38
Best1-201ENSMUST00000117346 PtprkP35822 1457 aa17.37■□□□□ 0.37
Best1-201ENSMUST00000117346 Cux2P70298 1426 aa17.37■□□□□ 0.37
Best1-201ENSMUST00000117346 Grin2bQ01097 1482 aa17.37■□□□□ 0.37
Best1-201ENSMUST00000117346 Arhgap35Q91YM2 1499 aa17.36■□□□□ 0.37
Best1-201ENSMUST00000117346 Npm1Q61937 292 aaKnown RBP17.31■□□□□ 0.36
Best1-201ENSMUST00000117346 Map3k1P53349 1493 aa17.3■□□□□ 0.36
Best1-201ENSMUST00000117346 Clip1Q922J3 1391 aa17.28■□□□□ 0.36
Best1-201ENSMUST00000117346 Baz1bQ9Z277 1479 aa17.24■□□□□ 0.35
Best1-201ENSMUST00000117346 Mier1Q5UAK0 511 aa17.24■□□□□ 0.35
Best1-201ENSMUST00000117346 Zeb1Q64318 1117 aa17.22■□□□□ 0.35
Best1-201ENSMUST00000117346 LrpprcQ6PB66 1392 aaKnown RBP17.22■□□□□ 0.35
Best1-201ENSMUST00000117346 Mroh2bQ7M6Y6 1581 aa17.21■□□□□ 0.35
Best1-201ENSMUST00000117346 Efcab5A0JP43 1406 aa17.21■□□□□ 0.35
Best1-201ENSMUST00000117346 Eea1Q8BL66 1411 aa17.2■□□□□ 0.34
Best1-201ENSMUST00000117346 UbtfP25976 765 aaKnown RBP17.2■□□□□ 0.34
Best1-201ENSMUST00000117346 NefmP08553 848 aa17.19■□□□□ 0.34
Best1-201ENSMUST00000117346 PogzQ8BZH4 1409 aaKnown RBP17.18■□□□□ 0.34
Best1-201ENSMUST00000117346 Duox2A2AQ99 1517 aa17.14■□□□□ 0.33
Best1-201ENSMUST00000117346 AqrQ8CFQ3 1481 aaKnown RBP17.14■□□□□ 0.33
Best1-201ENSMUST00000117346 Setd5Q5XJV7 1441 aa17.11■□□□□ 0.33
Best1-201ENSMUST00000117346 Arap1Q4LDD4 1452 aa17.09■□□□□ 0.33
Best1-201ENSMUST00000117346 Mrc2Q64449 1479 aa17.09■□□□□ 0.33
Best1-201ENSMUST00000117346 Dhx29Q6PGC1 1365 aaKnown RBP17.08■□□□□ 0.32
Best1-201ENSMUST00000117346 Plekhg3Q4VAC9 1341 aa17.08■□□□□ 0.32
Best1-201ENSMUST00000117346 Arhgef5E9Q7D5 1581 aa17.06■□□□□ 0.32
Best1-201ENSMUST00000117346 Carmil1Q6EDY6 1374 aa17.05■□□□□ 0.32
Best1-201ENSMUST00000117346 Erich3F6QRE9 1637 aa17.04■□□□□ 0.32
Best1-201ENSMUST00000117346 Ankrd26Q811D2 1581 aa17.02■□□□□ 0.31
Best1-201ENSMUST00000117346 Samd9lQ69Z37 1561 aa17.01■□□□□ 0.31
Best1-201ENSMUST00000117346 SynmQ70IV5 1561 aa17.01■□□□□ 0.31
Best1-201ENSMUST00000117346 Crocc2F6XLV1 1638 aa17■□□□□ 0.31
Best1-201ENSMUST00000117346 Kif21aQ9QXL2 1672 aa16.99■□□□□ 0.31
Best1-201ENSMUST00000117346 Ap3b1Q9Z1T1 1105 aa16.99■□□□□ 0.31
Best1-201ENSMUST00000117346 Dnajc5bQ9CQ94 199 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms