RNA–Protein interactions for RNA: ENSMUST00000113889.8

Gtf3c5-202, Transcript of General transcription factor 3C polypeptide 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Gtf3c5, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5-202ENSMUST00000113889 NischQ80TM9 1593 aa27.14■■□□□ 1.94
Gtf3c5-202ENSMUST00000113889 Gm35339A0A140LHH9 1649 aa26.73■■□□□ 1.87
Gtf3c5-202ENSMUST00000113889 Abcc9P70170 1546 aa26.34■■□□□ 1.81
Gtf3c5-202ENSMUST00000113889 Abcc8B2RUS7 1588 aa25.84■■□□□ 1.73
Gtf3c5-202ENSMUST00000113889 Rhox8Q6VSS7 320 aa24.98■■□□□ 1.59
Gtf3c5-202ENSMUST00000113889 Rtl1Q7M732 1744 aa24.27■■□□□ 1.48
Gtf3c5-202ENSMUST00000113889 ScribQ80U72 1612 aa24.23■■□□□ 1.47
Gtf3c5-202ENSMUST00000113889 Dcaf1Q80TR8 1506 aa23.98■■□□□ 1.43
Gtf3c5-202ENSMUST00000113889 Ccdc180J3QNE4 1664 aa23.82■■□□□ 1.4
Gtf3c5-202ENSMUST00000113889 Rb1cc1Q9ESK9 1588 aa23.78■■□□□ 1.4
Gtf3c5-202ENSMUST00000113889 Kdm5dQ62240 1548 aa23.72■■□□□ 1.39
Gtf3c5-202ENSMUST00000113889 Zcchc6Q5BLK4 1491 aaKnown RBP23.62■■□□□ 1.37
Gtf3c5-202ENSMUST00000113889 NacadQ5SWP3 1504 aa23.51■■□□□ 1.35
Gtf3c5-202ENSMUST00000113889 Baz1aO88379 1555 aa23.47■■□□□ 1.35
Gtf3c5-202ENSMUST00000113889 Ccdc136Q3TVA9 1136 aa23.23■■□□□ 1.31
Gtf3c5-202ENSMUST00000113889 Sycp2Q9CUU3 1500 aa23.02■■□□□ 1.28
Gtf3c5-202ENSMUST00000113889 Crybg2B7ZCC2 1516 aa23■■□□□ 1.27
Gtf3c5-202ENSMUST00000113889 Smarca2Q6DIC0 1577 aa22.93■■□□□ 1.26
Gtf3c5-202ENSMUST00000113889 HrcG5E8J6 738 aa22.75■■□□□ 1.23
Gtf3c5-202ENSMUST00000113889 Trim41Q5NCC3 630 aa22.64■■□□□ 1.21
Gtf3c5-202ENSMUST00000113889 BicraF8VPZ9 1578 aa22.57■■□□□ 1.2
Gtf3c5-202ENSMUST00000113889 Cecr2E9Q2Z1 1453 aa22.5■■□□□ 1.19
Gtf3c5-202ENSMUST00000113889 Brd4Q9ESU6 1400 aaKnown RBP22.35■■□□□ 1.17
Gtf3c5-202ENSMUST00000113889 Synj1Q8CHC4 1574 aa22.25■■□□□ 1.15
Gtf3c5-202ENSMUST00000113889 Cngb1E1AZ71 1325 aa22.21■■□□□ 1.15
Gtf3c5-202ENSMUST00000113889 Cep164Q5DU05 1446 aa22.2■■□□□ 1.14
Gtf3c5-202ENSMUST00000113889 Ehmt2Q9Z148 1263 aaKnown RBP22.19■■□□□ 1.14
Gtf3c5-202ENSMUST00000113889 CftrP26361 1476 aa22.11■■□□□ 1.13
Gtf3c5-202ENSMUST00000113889 Rsf1E9PWW9 1441 aaKnown RBP22.09■■□□□ 1.13
Gtf3c5-202ENSMUST00000113889 Golga3P55937 1487 aa22.08■■□□□ 1.12
Gtf3c5-202ENSMUST00000113889 Chic1Q8CBW7 227 aa22.07■■□□□ 1.12
Gtf3c5-202ENSMUST00000113889 Ccdc88bQ4QRL3 1481 aa21.98■■□□□ 1.11
Gtf3c5-202ENSMUST00000113889 Smarca4Q3TKT4 1613 aaKnown RBP21.98■■□□□ 1.11
Gtf3c5-202ENSMUST00000113889 Cttnbp2B9EJA2 1648 aa21.96■■□□□ 1.11
Gtf3c5-202ENSMUST00000113889 Esf1Q3V1V3 845 aaKnown RBP21.96■■□□□ 1.11
Gtf3c5-202ENSMUST00000113889 Rpgrip1Q9EPQ2 1331 aa21.95■■□□□ 1.1
Gtf3c5-202ENSMUST00000113889 Acin1Q9JIX8 1338 aaKnown RBP21.91■■□□□ 1.1
Gtf3c5-202ENSMUST00000113889 Gab3Q8BSM5 595 aa21.86■■□□□ 1.09
Gtf3c5-202ENSMUST00000113889 Top2bQ64511 1612 aa21.85■■□□□ 1.09
Gtf3c5-202ENSMUST00000113889 Iqgap2Q3UQ44 1575 aa21.72■■□□□ 1.07
Gtf3c5-202ENSMUST00000113889 Cc2d2aQ8CFW7 1633 aa21.69■■□□□ 1.06
Gtf3c5-202ENSMUST00000113889 Atad2bE9Q166 1460 aaKnown RBP21.63■■□□□ 1.05
Gtf3c5-202ENSMUST00000113889 Pds5bQ4VA53 1446 aaKnown RBP21.54■■□□□ 1.04
Gtf3c5-202ENSMUST00000113889 Fmn1Q05860 1466 aa21.51■■□□□ 1.03
Gtf3c5-202ENSMUST00000113889 Top2aQ01320 1528 aaKnown RBP21.41■■□□□ 1.02
Gtf3c5-202ENSMUST00000113889 Frmpd1A2AKB4 1549 aa21.34■■□□□ 1.01
Gtf3c5-202ENSMUST00000113889 Rapgef2Q8CHG7 1496 aa21.33■■□□□ 1.01
Gtf3c5-202ENSMUST00000113889 Wdr62Q3U3T8 1523 aa21.31■■□□□ 1
Gtf3c5-202ENSMUST00000113889 TnnQ80Z71 1560 aa21.23■□□□□ 0.99
Gtf3c5-202ENSMUST00000113889 Cep162Q6ZQ06 1403 aa21.17■□□□□ 0.98
Gtf3c5-202ENSMUST00000113889 Ercc6F8VPZ5 1481 aa21.16■□□□□ 0.98
Gtf3c5-202ENSMUST00000113889 Myt1lP97500 1187 aa21.12■□□□□ 0.97
Gtf3c5-202ENSMUST00000113889 Npm2Q80W85 207 aa21.1■□□□□ 0.97
Gtf3c5-202ENSMUST00000113889 Unc13aQ4KUS2 1712 aa21.09■□□□□ 0.97
Gtf3c5-202ENSMUST00000113889 Lamc3Q9R0B6 1581 aa21.09■□□□□ 0.97
Gtf3c5-202ENSMUST00000113889 Kif15Q6P9L6 1387 aa21.06■□□□□ 0.96
Gtf3c5-202ENSMUST00000113889 Mier1Q5UAK0 511 aa21.02■□□□□ 0.96
Gtf3c5-202ENSMUST00000113889 Eif4g1Q6NZJ6 1600 aaKnown RBP21■□□□□ 0.95
Gtf3c5-202ENSMUST00000113889 Il27Q8K3I6 234 aa21■□□□□ 0.95
Gtf3c5-202ENSMUST00000113889 PtprkP35822 1457 aa20.97■□□□□ 0.95
Gtf3c5-202ENSMUST00000113889 Camsap1A2AHC3 1581 aa20.92■□□□□ 0.94
Gtf3c5-202ENSMUST00000113889 Thoc2B1AZI6 1594 aaKnown RBP20.91■□□□□ 0.94
Gtf3c5-202ENSMUST00000113889 UbtfP25976 765 aaKnown RBP20.9■□□□□ 0.94
Gtf3c5-202ENSMUST00000113889 Arhgap35Q91YM2 1499 aa20.88■□□□□ 0.93
Gtf3c5-202ENSMUST00000113889 NrkQ9R0G8 1455 aa20.86■□□□□ 0.93
Gtf3c5-202ENSMUST00000113889 Pcgf6Q99NA9 353 aa20.85■□□□□ 0.93
Gtf3c5-202ENSMUST00000113889 Phldb1Q6PDH0 1371 aaKnown RBP20.84■□□□□ 0.93
Gtf3c5-202ENSMUST00000113889 Clip1Q922J3 1391 aa20.82■□□□□ 0.92
Gtf3c5-202ENSMUST00000113889 Shroom4Q1W617 1475 aa20.81■□□□□ 0.92
Gtf3c5-202ENSMUST00000113889 Ccdc18Q640L5 1455 aa20.79■□□□□ 0.92
Gtf3c5-202ENSMUST00000113889 NefmP08553 848 aa20.77■□□□□ 0.92
Gtf3c5-202ENSMUST00000113889 Grin2bQ01097 1482 aa20.77■□□□□ 0.92
Gtf3c5-202ENSMUST00000113889 Ubl4bQ9CQ84 188 aa20.74■□□□□ 0.91
Gtf3c5-202ENSMUST00000113889 Cux2P70298 1426 aa20.73■□□□□ 0.91
Gtf3c5-202ENSMUST00000113889 Plekhg3Q4VAC9 1341 aa20.73■□□□□ 0.91
Gtf3c5-202ENSMUST00000113889 Supt5hO55201 1082 aaKnown RBP20.7■□□□□ 0.9
Gtf3c5-202ENSMUST00000113889 Zeb1Q64318 1117 aa20.68■□□□□ 0.9
Gtf3c5-202ENSMUST00000113889 Fam135aQ6NS59 1506 aa20.66■□□□□ 0.9
Gtf3c5-202ENSMUST00000113889 Map3k1P53349 1493 aa20.65■□□□□ 0.9
Gtf3c5-202ENSMUST00000113889 Arap1Q4LDD4 1452 aa20.64■□□□□ 0.89
Gtf3c5-202ENSMUST00000113889 Eea1Q8BL66 1411 aa20.62■□□□□ 0.89
Gtf3c5-202ENSMUST00000113889 Npm1Q61937 292 aaKnown RBP20.61■□□□□ 0.89
Gtf3c5-202ENSMUST00000113889 Baz1bQ9Z277 1479 aa20.61■□□□□ 0.89
Gtf3c5-202ENSMUST00000113889 Ap3b1Q9Z1T1 1105 aa20.61■□□□□ 0.89
Gtf3c5-202ENSMUST00000113889 Mroh2bQ7M6Y6 1581 aa20.6■□□□□ 0.89
Gtf3c5-202ENSMUST00000113889 Setd5Q5XJV7 1441 aa20.57■□□□□ 0.88
Gtf3c5-202ENSMUST00000113889 LrpprcQ6PB66 1392 aaKnown RBP20.54■□□□□ 0.88
Gtf3c5-202ENSMUST00000113889 Arhgef5E9Q7D5 1581 aa20.52■□□□□ 0.88
Gtf3c5-202ENSMUST00000113889 PogzQ8BZH4 1409 aaKnown RBP20.5■□□□□ 0.87
Gtf3c5-202ENSMUST00000113889 Efcab5A0JP43 1406 aa20.49■□□□□ 0.87
Gtf3c5-202ENSMUST00000113889 Duox2A2AQ99 1517 aa20.48■□□□□ 0.87
Gtf3c5-202ENSMUST00000113889 Ncapd3Q6ZQK0 1506 aa20.47■□□□□ 0.87
Gtf3c5-202ENSMUST00000113889 Ankrd26Q811D2 1581 aa20.46■□□□□ 0.87
Gtf3c5-202ENSMUST00000113889 AqrQ8CFQ3 1481 aaKnown RBP20.45■□□□□ 0.86
Gtf3c5-202ENSMUST00000113889 Erich3F6QRE9 1637 aa20.41■□□□□ 0.86
Gtf3c5-202ENSMUST00000113889 Tiam1Q60610 1591 aa20.39■□□□□ 0.85
Gtf3c5-202ENSMUST00000113889 Dhx29Q6PGC1 1365 aaKnown RBP20.39■□□□□ 0.85
Gtf3c5-202ENSMUST00000113889 Samd9lQ69Z37 1561 aa20.38■□□□□ 0.85
Gtf3c5-202ENSMUST00000113889 Carmil1Q6EDY6 1374 aa20.37■□□□□ 0.85
Gtf3c5-202ENSMUST00000113889 Cux1P53564 1515 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms