RNA–Protein interactions for RNA: ENSMUST00000112934.7

Rc3h2-202, Transcript of Roquin-2, mousemouse

TSL 1 (best) BASIC

Gene Rc3h2, Length 8,948 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2-202ENSMUST00000112934 Gm35339A0A140LHH9 1649 aa12□□□□□ -0.49
Rc3h2-202ENSMUST00000112934 NischQ80TM9 1593 aa11.87□□□□□ -0.51
Rc3h2-202ENSMUST00000112934 Abcc9P70170 1546 aa11.73□□□□□ -0.53
Rc3h2-202ENSMUST00000112934 Abcc8B2RUS7 1588 aa11.53□□□□□ -0.56
Rc3h2-202ENSMUST00000112934 Dcaf1Q80TR8 1506 aa10.91□□□□□ -0.66
Rc3h2-202ENSMUST00000112934 ScribQ80U72 1612 aa10.74□□□□□ -0.69
Rc3h2-202ENSMUST00000112934 Zcchc6Q5BLK4 1491 aaKnown RBP10.47□□□□□ -0.73
Rc3h2-202ENSMUST00000112934 Kdm5dQ62240 1548 aa10.46□□□□□ -0.73
Rc3h2-202ENSMUST00000112934 NacadQ5SWP3 1504 aa10.44□□□□□ -0.74
Rc3h2-202ENSMUST00000112934 Crybg2B7ZCC2 1516 aa10.42□□□□□ -0.74
Rc3h2-202ENSMUST00000112934 Ccdc180J3QNE4 1664 aa10.39□□□□□ -0.75
Rc3h2-202ENSMUST00000112934 Baz1aO88379 1555 aa10.34□□□□□ -0.75
Rc3h2-202ENSMUST00000112934 Rb1cc1Q9ESK9 1588 aa10.31□□□□□ -0.76
Rc3h2-202ENSMUST00000112934 Rtl1Q7M732 1744 aa10.29□□□□□ -0.76
Rc3h2-202ENSMUST00000112934 Sycp2Q9CUU3 1500 aa10.28□□□□□ -0.76
Rc3h2-202ENSMUST00000112934 Rhox8Q6VSS7 320 aa10.24□□□□□ -0.77
Rc3h2-202ENSMUST00000112934 Smarca2Q6DIC0 1577 aa10.14□□□□□ -0.79
Rc3h2-202ENSMUST00000112934 BicraF8VPZ9 1578 aa10.03□□□□□ -0.8
Rc3h2-202ENSMUST00000112934 Cecr2E9Q2Z1 1453 aa9.85□□□□□ -0.83
Rc3h2-202ENSMUST00000112934 HrcG5E8J6 738 aa9.84□□□□□ -0.83
Rc3h2-202ENSMUST00000112934 CftrP26361 1476 aa9.77□□□□□ -0.85
Rc3h2-202ENSMUST00000112934 Brd4Q9ESU6 1400 aaKnown RBP9.73□□□□□ -0.85
Rc3h2-202ENSMUST00000112934 Synj1Q8CHC4 1574 aa9.68□□□□□ -0.86
Rc3h2-202ENSMUST00000112934 Smarca4Q3TKT4 1613 aaKnown RBP9.66□□□□□ -0.86
Rc3h2-202ENSMUST00000112934 Golga3P55937 1487 aa9.65□□□□□ -0.86
Rc3h2-202ENSMUST00000112934 Atad2bE9Q166 1460 aaKnown RBP9.65□□□□□ -0.86
Rc3h2-202ENSMUST00000112934 Cep164Q5DU05 1446 aa9.62□□□□□ -0.87
Rc3h2-202ENSMUST00000112934 Trim41Q5NCC3 630 aa9.59□□□□□ -0.87
Rc3h2-202ENSMUST00000112934 Top2bQ64511 1612 aa9.59□□□□□ -0.87
Rc3h2-202ENSMUST00000112934 Cttnbp2B9EJA2 1648 aa9.57□□□□□ -0.88
Rc3h2-202ENSMUST00000112934 Pds5bQ4VA53 1446 aaKnown RBP9.56□□□□□ -0.88
Rc3h2-202ENSMUST00000112934 Ccdc136Q3TVA9 1136 aa9.54□□□□□ -0.88
Rc3h2-202ENSMUST00000112934 Rsf1E9PWW9 1441 aaKnown RBP9.54□□□□□ -0.88
Rc3h2-202ENSMUST00000112934 Iqgap2Q3UQ44 1575 aa9.51□□□□□ -0.89
Rc3h2-202ENSMUST00000112934 Ccdc88bQ4QRL3 1481 aa9.51□□□□□ -0.89
Rc3h2-202ENSMUST00000112934 TnnQ80Z71 1560 aa9.46□□□□□ -0.89
Rc3h2-202ENSMUST00000112934 Wdr62Q3U3T8 1523 aa9.45□□□□□ -0.9
Rc3h2-202ENSMUST00000112934 Frmpd1A2AKB4 1549 aa9.43□□□□□ -0.9
Rc3h2-202ENSMUST00000112934 Fmn1Q05860 1466 aa9.43□□□□□ -0.9
Rc3h2-202ENSMUST00000112934 Top2aQ01320 1528 aaKnown RBP9.38□□□□□ -0.91
Rc3h2-202ENSMUST00000112934 Chic1Q8CBW7 227 aa9.38□□□□□ -0.91
Rc3h2-202ENSMUST00000112934 Thoc2B1AZI6 1594 aaKnown RBP9.37□□□□□ -0.91
Rc3h2-202ENSMUST00000112934 Rapgef2Q8CHG7 1496 aa9.35□□□□□ -0.91
Rc3h2-202ENSMUST00000112934 Lamc3Q9R0B6 1581 aa9.34□□□□□ -0.91
Rc3h2-202ENSMUST00000112934 Eif4g1Q6NZJ6 1600 aaKnown RBP9.33□□□□□ -0.92
Rc3h2-202ENSMUST00000112934 Baz1bQ9Z277 1479 aa9.32□□□□□ -0.92
Rc3h2-202ENSMUST00000112934 Fam135aQ6NS59 1506 aa9.28□□□□□ -0.92
Rc3h2-202ENSMUST00000112934 NrkQ9R0G8 1455 aa9.25□□□□□ -0.93
Rc3h2-202ENSMUST00000112934 Ercc6F8VPZ5 1481 aa9.22□□□□□ -0.93
Rc3h2-202ENSMUST00000112934 Phldb1Q6PDH0 1371 aaKnown RBP9.21□□□□□ -0.94
Rc3h2-202ENSMUST00000112934 Cc2d2aQ8CFW7 1633 aa9.19□□□□□ -0.94
Rc3h2-202ENSMUST00000112934 Cep162Q6ZQ06 1403 aa9.19□□□□□ -0.94
Rc3h2-202ENSMUST00000112934 Camsap1A2AHC3 1581 aa9.15□□□□□ -0.94
Rc3h2-202ENSMUST00000112934 Map3k1P53349 1493 aa9.15□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 PtprkP35822 1457 aa9.14□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Acin1Q9JIX8 1338 aaKnown RBP9.14□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Rpgrip1Q9EPQ2 1331 aa9.12□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Grin2bQ01097 1482 aa9.12□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Gpatch8A2A6A1 1505 aa9.12□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Shroom4Q1W617 1475 aa9.12□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Arhgap35Q91YM2 1499 aa9.12□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 AqrQ8CFQ3 1481 aaKnown RBP9.1□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 Cngb1E1AZ71 1325 aa9.09□□□□□ -0.95
Rc3h2-202ENSMUST00000112934 PogzQ8BZH4 1409 aaKnown RBP9.06□□□□□ -0.96
Rc3h2-202ENSMUST00000112934 Kif15Q6P9L6 1387 aa9.05□□□□□ -0.96
Rc3h2-202ENSMUST00000112934 Efcab5A0JP43 1406 aa9.04□□□□□ -0.96
Rc3h2-202ENSMUST00000112934 Unc13aQ4KUS2 1712 aa9.02□□□□□ -0.97
Rc3h2-202ENSMUST00000112934 Esf1Q3V1V3 845 aaKnown RBP9.02□□□□□ -0.97
Rc3h2-202ENSMUST00000112934 Cux2P70298 1426 aa9.01□□□□□ -0.97
Rc3h2-202ENSMUST00000112934 Mroh2bQ7M6Y6 1581 aa9.01□□□□□ -0.97
Rc3h2-202ENSMUST00000112934 Ccdc18Q640L5 1455 aa9□□□□□ -0.97
Rc3h2-202ENSMUST00000112934 LrpprcQ6PB66 1392 aaKnown RBP8.99□□□□□ -0.97
Rc3h2-202ENSMUST00000112934 Kdm5bQ80Y84 1544 aa8.95□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Arap1Q4LDD4 1452 aa8.95□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Carmil1Q6EDY6 1374 aa8.93□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Arhgef5E9Q7D5 1581 aa8.93□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Duox2A2AQ99 1517 aa8.92□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Mrc2Q64449 1479 aa8.92□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 BlmO88700 1416 aa8.9□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Ankrd26Q811D2 1581 aa8.9□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Dhx29Q6PGC1 1365 aaKnown RBP8.9□□□□□ -0.98
Rc3h2-202ENSMUST00000112934 Rpap1Q80TE0 1409 aa8.89□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Erich3F6QRE9 1637 aa8.88□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 EprsQ8CGC7 1512 aaKnown RBP8.88□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Gab3Q8BSM5 595 aa8.87□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Magi3Q9EQJ9 1476 aa8.87□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Samd9lQ69Z37 1561 aa8.87□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Ncapd3Q6ZQK0 1506 aa8.87□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 SynmQ70IV5 1561 aa8.87□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Cux1P53564 1515 aa8.86□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Pla2r1Q62028 1487 aa8.86□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Clip1Q922J3 1391 aa8.86□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Dnajc5bQ9CQ94 199 aa8.86□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 TchhA0A0B4J1F9 1599 aa8.86□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Peg3Q3URU2 1571 aa8.85□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Nup160Q9Z0W3 1402 aaKnown RBP8.85□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Naip1Q9QWK5 1403 aa8.85□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Urb2E9Q7L1 1524 aaKnown RBP8.85□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Gm1043A0A140LJC2 1431 aa8.84□□□□□ -0.99
Rc3h2-202ENSMUST00000112934 Tiam1Q60610 1591 aa8.84□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms