RNA–Protein interactions for RNA: ENSMUST00000111356.7

Nr1h3-204, Transcript of Oxysterols receptor LXR-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nr1h3, Length 1,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3-204ENSMUST00000111356 NischQ80TM9 1593 aa37.81■■■■□ 3.64
Nr1h3-204ENSMUST00000111356 Gm35339A0A140LHH9 1649 aa37.7■■■■□ 3.63
Nr1h3-204ENSMUST00000111356 Abcc9P70170 1546 aa36.7■■■■□ 3.47
Nr1h3-204ENSMUST00000111356 Abcc8B2RUS7 1588 aa36.1■■■■□ 3.37
Nr1h3-204ENSMUST00000111356 ScribQ80U72 1612 aa34.4■■■■□ 3.1
Nr1h3-204ENSMUST00000111356 Rhox8Q6VSS7 320 aa34.26■■■■□ 3.08
Nr1h3-204ENSMUST00000111356 Dcaf1Q80TR8 1506 aa33.65■■■□□ 2.98
Nr1h3-204ENSMUST00000111356 Kdm5dQ62240 1548 aa33.4■■■□□ 2.94
Nr1h3-204ENSMUST00000111356 Rtl1Q7M732 1744 aa33.35■■■□□ 2.93
Nr1h3-204ENSMUST00000111356 NacadQ5SWP3 1504 aa33.33■■■□□ 2.93
Nr1h3-204ENSMUST00000111356 Rb1cc1Q9ESK9 1588 aa33.05■■■□□ 2.88
Nr1h3-204ENSMUST00000111356 Ccdc180J3QNE4 1664 aa32.79■■■□□ 2.84
Nr1h3-204ENSMUST00000111356 Baz1aO88379 1555 aa32.69■■■□□ 2.82
Nr1h3-204ENSMUST00000111356 Sycp2Q9CUU3 1500 aa32.68■■■□□ 2.82
Nr1h3-204ENSMUST00000111356 Crybg2B7ZCC2 1516 aa32.33■■■□□ 2.77
Nr1h3-204ENSMUST00000111356 Zcchc6Q5BLK4 1491 aaKnown RBP32.32■■■□□ 2.76
Nr1h3-204ENSMUST00000111356 BicraF8VPZ9 1578 aa32.16■■■□□ 2.74
Nr1h3-204ENSMUST00000111356 Smarca2Q6DIC0 1577 aa31.89■■■□□ 2.7
Nr1h3-204ENSMUST00000111356 Ccdc136Q3TVA9 1136 aa31.85■■■□□ 2.69
Nr1h3-204ENSMUST00000111356 Trim41Q5NCC3 630 aa31.37■■■□□ 2.61
Nr1h3-204ENSMUST00000111356 Cecr2E9Q2Z1 1453 aa31.24■■■□□ 2.59
Nr1h3-204ENSMUST00000111356 HrcG5E8J6 738 aa31.21■■■□□ 2.59
Nr1h3-204ENSMUST00000111356 Brd4Q9ESU6 1400 aaKnown RBP31.12■■■□□ 2.57
Nr1h3-204ENSMUST00000111356 Pds5bQ4VA53 1446 aaKnown RBP30.98■■■□□ 2.55
Nr1h3-204ENSMUST00000111356 Smarca4Q3TKT4 1613 aaKnown RBP30.92■■■□□ 2.54
Nr1h3-204ENSMUST00000111356 Atad2bE9Q166 1460 aaKnown RBP30.88■■■□□ 2.53
Nr1h3-204ENSMUST00000111356 Synj1Q8CHC4 1574 aa30.87■■■□□ 2.53
Nr1h3-204ENSMUST00000111356 CftrP26361 1476 aa30.78■■■□□ 2.52
Nr1h3-204ENSMUST00000111356 Iqgap2Q3UQ44 1575 aa30.66■■■□□ 2.5
Nr1h3-204ENSMUST00000111356 Cttnbp2B9EJA2 1648 aa30.64■■■□□ 2.5
Nr1h3-204ENSMUST00000111356 Golga3P55937 1487 aa30.57■■■□□ 2.48
Nr1h3-204ENSMUST00000111356 Cngb1E1AZ71 1325 aa30.51■■■□□ 2.48
Nr1h3-204ENSMUST00000111356 Thoc2B1AZI6 1594 aaKnown RBP30.49■■■□□ 2.47
Nr1h3-204ENSMUST00000111356 Cep164Q5DU05 1446 aa30.45■■■□□ 2.47
Nr1h3-204ENSMUST00000111356 Esf1Q3V1V3 845 aaKnown RBP30.44■■■□□ 2.46
Nr1h3-204ENSMUST00000111356 Ercc6F8VPZ5 1481 aa30.32■■■□□ 2.44
Nr1h3-204ENSMUST00000111356 Top2bQ64511 1612 aa30.3■■■□□ 2.44
Nr1h3-204ENSMUST00000111356 Rsf1E9PWW9 1441 aaKnown RBP30.29■■■□□ 2.44
Nr1h3-204ENSMUST00000111356 Wdr62Q3U3T8 1523 aa30.28■■■□□ 2.44
Nr1h3-204ENSMUST00000111356 Frmpd1A2AKB4 1549 aa30.28■■■□□ 2.44
Nr1h3-204ENSMUST00000111356 Dnajc5bQ9CQ94 199 aa30.24■■■□□ 2.43
Nr1h3-204ENSMUST00000111356 Chic1Q8CBW7 227 aa30.22■■■□□ 2.43
Nr1h3-204ENSMUST00000111356 Ccdc88bQ4QRL3 1481 aa30.18■■■□□ 2.42
Nr1h3-204ENSMUST00000111356 Cc2d2aQ8CFW7 1633 aa30.05■■■□□ 2.4
Nr1h3-204ENSMUST00000111356 Fam135aQ6NS59 1506 aa29.93■■■□□ 2.38
Nr1h3-204ENSMUST00000111356 Unc13aQ4KUS2 1712 aa29.92■■■□□ 2.38
Nr1h3-204ENSMUST00000111356 Fmn1Q05860 1466 aa29.89■■■□□ 2.38
Nr1h3-204ENSMUST00000111356 Phldb1Q6PDH0 1371 aaKnown RBP29.88■■■□□ 2.37
Nr1h3-204ENSMUST00000111356 Gab3Q8BSM5 595 aa29.77■■■□□ 2.36
Nr1h3-204ENSMUST00000111356 Top2aQ01320 1528 aaKnown RBP29.63■■■□□ 2.33
Nr1h3-204ENSMUST00000111356 TnnQ80Z71 1560 aa29.6■■■□□ 2.33
Nr1h3-204ENSMUST00000111356 Ubl4bQ9CQ84 188 aa29.58■■■□□ 2.33
Nr1h3-204ENSMUST00000111356 Ehmt2Q9Z148 1263 aaKnown RBP29.52■■■□□ 2.32
Nr1h3-204ENSMUST00000111356 Lamc3Q9R0B6 1581 aa29.5■■■□□ 2.31
Nr1h3-204ENSMUST00000111356 Baz1bQ9Z277 1479 aa29.49■■■□□ 2.31
Nr1h3-204ENSMUST00000111356 Kif15Q6P9L6 1387 aa29.4■■■□□ 2.3
Nr1h3-204ENSMUST00000111356 Rapgef2Q8CHG7 1496 aa29.4■■■□□ 2.3
Nr1h3-204ENSMUST00000111356 Rpgrip1Q9EPQ2 1331 aa29.39■■■□□ 2.3
Nr1h3-204ENSMUST00000111356 Acin1Q9JIX8 1338 aaKnown RBP29.3■■■□□ 2.28
Nr1h3-204ENSMUST00000111356 Mrc2Q64449 1479 aa29.22■■■□□ 2.27
Nr1h3-204ENSMUST00000111356 Cux2P70298 1426 aa29.22■■■□□ 2.27
Nr1h3-204ENSMUST00000111356 Cep162Q6ZQ06 1403 aa29.16■■■□□ 2.26
Nr1h3-204ENSMUST00000111356 Camsap1A2AHC3 1581 aa29.15■■■□□ 2.26
Nr1h3-204ENSMUST00000111356 Ccdc18Q640L5 1455 aa29.09■■■□□ 2.25
Nr1h3-204ENSMUST00000111356 Npm2Q80W85 207 aa29.07■■■□□ 2.24
Nr1h3-204ENSMUST00000111356 Il27Q8K3I6 234 aa29.06■■■□□ 2.24
Nr1h3-204ENSMUST00000111356 Eif4g1Q6NZJ6 1600 aaKnown RBP29■■■□□ 2.23
Nr1h3-204ENSMUST00000111356 NrkQ9R0G8 1455 aa28.98■■■□□ 2.23
Nr1h3-204ENSMUST00000111356 PtprkP35822 1457 aa28.96■■■□□ 2.23
Nr1h3-204ENSMUST00000111356 Npm1Q61937 292 aaKnown RBP28.93■■■□□ 2.22
Nr1h3-204ENSMUST00000111356 Grin2bQ01097 1482 aa28.92■■■□□ 2.22
Nr1h3-204ENSMUST00000111356 Shroom4Q1W617 1475 aa28.91■■■□□ 2.22
Nr1h3-204ENSMUST00000111356 Myt1lP97500 1187 aa28.9■■■□□ 2.22
Nr1h3-204ENSMUST00000111356 Kif21aQ9QXL2 1672 aa28.85■■■□□ 2.21
Nr1h3-204ENSMUST00000111356 Arhgap35Q91YM2 1499 aa28.84■■■□□ 2.21
Nr1h3-204ENSMUST00000111356 LrpprcQ6PB66 1392 aaKnown RBP28.75■■■□□ 2.19
Nr1h3-204ENSMUST00000111356 Map3k1P53349 1493 aa28.7■■■□□ 2.18
Nr1h3-204ENSMUST00000111356 Dhx29Q6PGC1 1365 aaKnown RBP28.67■■■□□ 2.18
Nr1h3-204ENSMUST00000111356 Efcab5A0JP43 1406 aa28.67■■■□□ 2.18
Nr1h3-204ENSMUST00000111356 PogzQ8BZH4 1409 aaKnown RBP28.66■■■□□ 2.18
Nr1h3-204ENSMUST00000111356 Mroh2bQ7M6Y6 1581 aa28.62■■■□□ 2.17
Nr1h3-204ENSMUST00000111356 Clip1Q922J3 1391 aa28.59■■■□□ 2.17
Nr1h3-204ENSMUST00000111356 Duox2A2AQ99 1517 aa28.58■■■□□ 2.17
Nr1h3-204ENSMUST00000111356 Lrriq1Q0P5X1 1673 aa28.57■■■□□ 2.16
Nr1h3-204ENSMUST00000111356 Zeb1Q64318 1117 aa28.54■■■□□ 2.16
Nr1h3-204ENSMUST00000111356 Crocc2F6XLV1 1638 aa28.51■■■□□ 2.15
Nr1h3-204ENSMUST00000111356 Eea1Q8BL66 1411 aa28.47■■■□□ 2.15
Nr1h3-204ENSMUST00000111356 AqrQ8CFQ3 1481 aaKnown RBP28.47■■■□□ 2.15
Nr1h3-204ENSMUST00000111356 Plb1Q3TTY0 1478 aa28.44■■■□□ 2.14
Nr1h3-204ENSMUST00000111356 Urb2E9Q7L1 1524 aaKnown RBP28.44■■■□□ 2.14
Nr1h3-204ENSMUST00000111356 Mier1Q5UAK0 511 aa28.39■■■□□ 2.13
Nr1h3-204ENSMUST00000111356 Setd5Q5XJV7 1441 aa28.37■■■□□ 2.13
Nr1h3-204ENSMUST00000111356 UbtfP25976 765 aaKnown RBP28.35■■■□□ 2.13
Nr1h3-204ENSMUST00000111356 Samd9lQ69Z37 1561 aa28.35■■■□□ 2.13
Nr1h3-204ENSMUST00000111356 Carmil1Q6EDY6 1374 aa28.34■■■□□ 2.13
Nr1h3-204ENSMUST00000111356 Arap1Q4LDD4 1452 aa28.34■■■□□ 2.13
Nr1h3-204ENSMUST00000111356 SynmQ70IV5 1561 aa28.29■■■□□ 2.12
Nr1h3-204ENSMUST00000111356 Arhgef5E9Q7D5 1581 aa28.27■■■□□ 2.12
Nr1h3-204ENSMUST00000111356 Plekhg3Q4VAC9 1341 aa28.26■■■□□ 2.11
Nr1h3-204ENSMUST00000111356 Ankrd26Q811D2 1581 aa28.25■■■□□ 2.11
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms