RNA–Protein interactions for RNA: ENSMUST00000110287.1

Ebf4-202, Transcript of Transcription factor COE4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ebf4, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4-202ENSMUST00000110287 NischQ80TM9 1593 aa28.92■■■□□ 2.22
Ebf4-202ENSMUST00000110287 Gm35339A0A140LHH9 1649 aa28.36■■■□□ 2.13
Ebf4-202ENSMUST00000110287 Abcc9P70170 1546 aa28.06■■■□□ 2.08
Ebf4-202ENSMUST00000110287 Abcc8B2RUS7 1588 aa27.47■■□□□ 1.99
Ebf4-202ENSMUST00000110287 Rhox8Q6VSS7 320 aa26.88■■□□□ 1.89
Ebf4-202ENSMUST00000110287 Rtl1Q7M732 1744 aa26.23■■□□□ 1.79
Ebf4-202ENSMUST00000110287 Ccdc180J3QNE4 1664 aa25.77■■□□□ 1.72
Ebf4-202ENSMUST00000110287 ScribQ80U72 1612 aa25.61■■□□□ 1.69
Ebf4-202ENSMUST00000110287 Dcaf1Q80TR8 1506 aa25.57■■□□□ 1.68
Ebf4-202ENSMUST00000110287 Rb1cc1Q9ESK9 1588 aa25.35■■□□□ 1.65
Ebf4-202ENSMUST00000110287 Zcchc6Q5BLK4 1491 aaKnown RBP25.35■■□□□ 1.65
Ebf4-202ENSMUST00000110287 Kdm5dQ62240 1548 aa25.17■■□□□ 1.62
Ebf4-202ENSMUST00000110287 Baz1aO88379 1555 aa25.04■■□□□ 1.6
Ebf4-202ENSMUST00000110287 NacadQ5SWP3 1504 aa24.98■■□□□ 1.59
Ebf4-202ENSMUST00000110287 Ccdc136Q3TVA9 1136 aa24.92■■□□□ 1.58
Ebf4-202ENSMUST00000110287 HrcG5E8J6 738 aa24.6■■□□□ 1.53
Ebf4-202ENSMUST00000110287 Crybg2B7ZCC2 1516 aa24.53■■□□□ 1.52
Ebf4-202ENSMUST00000110287 Smarca2Q6DIC0 1577 aa24.45■■□□□ 1.5
Ebf4-202ENSMUST00000110287 Sycp2Q9CUU3 1500 aa24.42■■□□□ 1.5
Ebf4-202ENSMUST00000110287 Trim41Q5NCC3 630 aa24.36■■□□□ 1.49
Ebf4-202ENSMUST00000110287 Rpgrip1Q9EPQ2 1331 aa24.19■■□□□ 1.46
Ebf4-202ENSMUST00000110287 Ehmt2Q9Z148 1263 aaKnown RBP24.05■■□□□ 1.44
Ebf4-202ENSMUST00000110287 Acin1Q9JIX8 1338 aaKnown RBP23.94■■□□□ 1.42
Ebf4-202ENSMUST00000110287 Cep164Q5DU05 1446 aa23.92■■□□□ 1.42
Ebf4-202ENSMUST00000110287 Brd4Q9ESU6 1400 aaKnown RBP23.92■■□□□ 1.42
Ebf4-202ENSMUST00000110287 Cecr2E9Q2Z1 1453 aa23.91■■□□□ 1.42
Ebf4-202ENSMUST00000110287 BicraF8VPZ9 1578 aa23.86■■□□□ 1.41
Ebf4-202ENSMUST00000110287 Cngb1E1AZ71 1325 aa23.86■■□□□ 1.41
Ebf4-202ENSMUST00000110287 Synj1Q8CHC4 1574 aa23.7■■□□□ 1.38
Ebf4-202ENSMUST00000110287 Rsf1E9PWW9 1441 aaKnown RBP23.67■■□□□ 1.38
Ebf4-202ENSMUST00000110287 Chic1Q8CBW7 227 aa23.66■■□□□ 1.38
Ebf4-202ENSMUST00000110287 Golga3P55937 1487 aa23.64■■□□□ 1.38
Ebf4-202ENSMUST00000110287 CftrP26361 1476 aa23.57■■□□□ 1.36
Ebf4-202ENSMUST00000110287 Esf1Q3V1V3 845 aaKnown RBP23.56■■□□□ 1.36
Ebf4-202ENSMUST00000110287 Gab3Q8BSM5 595 aa23.53■■□□□ 1.36
Ebf4-202ENSMUST00000110287 Ccdc88bQ4QRL3 1481 aa23.52■■□□□ 1.36
Ebf4-202ENSMUST00000110287 Cttnbp2B9EJA2 1648 aa23.41■■□□□ 1.34
Ebf4-202ENSMUST00000110287 Smarca4Q3TKT4 1613 aaKnown RBP23.37■■□□□ 1.33
Ebf4-202ENSMUST00000110287 Top2bQ64511 1612 aa23.31■■□□□ 1.32
Ebf4-202ENSMUST00000110287 Cc2d2aQ8CFW7 1633 aa23.13■■□□□ 1.29
Ebf4-202ENSMUST00000110287 Iqgap2Q3UQ44 1575 aa23.07■■□□□ 1.28
Ebf4-202ENSMUST00000110287 Fmn1Q05860 1466 aa23.03■■□□□ 1.28
Ebf4-202ENSMUST00000110287 Atad2bE9Q166 1460 aaKnown RBP22.96■■□□□ 1.27
Ebf4-202ENSMUST00000110287 Top2aQ01320 1528 aaKnown RBP22.89■■□□□ 1.26
Ebf4-202ENSMUST00000110287 Pds5bQ4VA53 1446 aaKnown RBP22.87■■□□□ 1.25
Ebf4-202ENSMUST00000110287 Rapgef2Q8CHG7 1496 aa22.87■■□□□ 1.25
Ebf4-202ENSMUST00000110287 Pcgf6Q99NA9 353 aa22.84■■□□□ 1.25
Ebf4-202ENSMUST00000110287 Mier1Q5UAK0 511 aa22.76■■□□□ 1.23
Ebf4-202ENSMUST00000110287 Myt1lP97500 1187 aa22.72■■□□□ 1.23
Ebf4-202ENSMUST00000110287 Cep162Q6ZQ06 1403 aa22.71■■□□□ 1.23
Ebf4-202ENSMUST00000110287 Npm2Q80W85 207 aa22.71■■□□□ 1.23
Ebf4-202ENSMUST00000110287 NefmP08553 848 aa22.66■■□□□ 1.22
Ebf4-202ENSMUST00000110287 Frmpd1A2AKB4 1549 aa22.62■■□□□ 1.21
Ebf4-202ENSMUST00000110287 TnnQ80Z71 1560 aa22.6■■□□□ 1.21
Ebf4-202ENSMUST00000110287 Wdr62Q3U3T8 1523 aa22.6■■□□□ 1.21
Ebf4-202ENSMUST00000110287 UbtfP25976 765 aaKnown RBP22.59■■□□□ 1.21
Ebf4-202ENSMUST00000110287 Supt5hO55201 1082 aaKnown RBP22.58■■□□□ 1.21
Ebf4-202ENSMUST00000110287 Zeb1Q64318 1117 aa22.53■■□□□ 1.2
Ebf4-202ENSMUST00000110287 Ercc6F8VPZ5 1481 aa22.51■■□□□ 1.19
Ebf4-202ENSMUST00000110287 Kif15Q6P9L6 1387 aa22.45■■□□□ 1.18
Ebf4-202ENSMUST00000110287 Il27Q8K3I6 234 aa22.45■■□□□ 1.18
Ebf4-202ENSMUST00000110287 Lamc3Q9R0B6 1581 aa22.44■■□□□ 1.18
Ebf4-202ENSMUST00000110287 Eif4g1Q6NZJ6 1600 aaKnown RBP22.44■■□□□ 1.18
Ebf4-202ENSMUST00000110287 Clip1Q922J3 1391 aa22.41■■□□□ 1.18
Ebf4-202ENSMUST00000110287 PtprkP35822 1457 aa22.35■■□□□ 1.17
Ebf4-202ENSMUST00000110287 Arhgap35Q91YM2 1499 aa22.34■■□□□ 1.17
Ebf4-202ENSMUST00000110287 Plekhg3Q4VAC9 1341 aa22.3■■□□□ 1.16
Ebf4-202ENSMUST00000110287 NrkQ9R0G8 1455 aa22.3■■□□□ 1.16
Ebf4-202ENSMUST00000110287 Unc13aQ4KUS2 1712 aa22.29■■□□□ 1.16
Ebf4-202ENSMUST00000110287 Camsap1A2AHC3 1581 aa22.27■■□□□ 1.16
Ebf4-202ENSMUST00000110287 Shroom4Q1W617 1475 aa22.24■■□□□ 1.15
Ebf4-202ENSMUST00000110287 Ccdc18Q640L5 1455 aa22.22■■□□□ 1.15
Ebf4-202ENSMUST00000110287 Eea1Q8BL66 1411 aa22.18■■□□□ 1.14
Ebf4-202ENSMUST00000110287 Grin2bQ01097 1482 aa22.15■■□□□ 1.14
Ebf4-202ENSMUST00000110287 Phldb1Q6PDH0 1371 aaKnown RBP22.14■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Las1lA2BE28 776 aaKnown RBP22.14■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Ap3b1Q9Z1T1 1105 aa22.12■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Map3k1P53349 1493 aa22.12■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Arap1Q4LDD4 1452 aa22.11■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Sall2Q9QX96 1004 aa22.1■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Setd5Q5XJV7 1441 aa22.09■■□□□ 1.13
Ebf4-202ENSMUST00000110287 Ubl4bQ9CQ84 188 aa22.06■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Cux2P70298 1426 aa22.06■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Thoc2B1AZI6 1594 aaKnown RBP22.06■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Ncapd3Q6ZQK0 1506 aa22.03■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Baz1bQ9Z277 1479 aa22.02■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Npm1Q61937 292 aaKnown RBP22.02■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Mroh2bQ7M6Y6 1581 aa22.02■■□□□ 1.12
Ebf4-202ENSMUST00000110287 Arhgef5E9Q7D5 1581 aa22.01■■□□□ 1.11
Ebf4-202ENSMUST00000110287 Wdr66E9Q743 1299 aa22■■□□□ 1.11
Ebf4-202ENSMUST00000110287 TonslQ6NZL6 1363 aa21.94■■□□□ 1.1
Ebf4-202ENSMUST00000110287 Aebp2Q9Z248 504 aaKnown RBP21.93■■□□□ 1.1
Ebf4-202ENSMUST00000110287 AqrQ8CFQ3 1481 aaKnown RBP21.89■■□□□ 1.09
Ebf4-202ENSMUST00000110287 LrpprcQ6PB66 1392 aaKnown RBP21.89■■□□□ 1.09
Ebf4-202ENSMUST00000110287 Tiam1Q60610 1591 aa21.87■■□□□ 1.09
Ebf4-202ENSMUST00000110287 Ankrd26Q811D2 1581 aa21.87■■□□□ 1.09
Ebf4-202ENSMUST00000110287 Efcab5A0JP43 1406 aa21.87■■□□□ 1.09
Ebf4-202ENSMUST00000110287 Fam135aQ6NS59 1506 aa21.86■■□□□ 1.09
Ebf4-202ENSMUST00000110287 Neurod1Q60867 357 aa21.84■■□□□ 1.09
Ebf4-202ENSMUST00000110287 Erich3F6QRE9 1637 aa21.83■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms