RNA–Protein interactions for RNA: ENSMUST00000110286.7

Ebf4-201, Transcript of Transcription factor COE4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ebf4, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4-201ENSMUST00000110286 NischQ80TM9 1593 aa27.84■■■□□ 2.05
Ebf4-201ENSMUST00000110286 Gm35339A0A140LHH9 1649 aa27.4■■□□□ 1.98
Ebf4-201ENSMUST00000110286 Abcc9P70170 1546 aa26.93■■□□□ 1.9
Ebf4-201ENSMUST00000110286 Abcc8B2RUS7 1588 aa26.55■■□□□ 1.84
Ebf4-201ENSMUST00000110286 Rhox8Q6VSS7 320 aa25.57■■□□□ 1.68
Ebf4-201ENSMUST00000110286 ScribQ80U72 1612 aa25.09■■□□□ 1.61
Ebf4-201ENSMUST00000110286 Kdm5dQ62240 1548 aa24.52■■□□□ 1.52
Ebf4-201ENSMUST00000110286 Dcaf1Q80TR8 1506 aa24.42■■□□□ 1.5
Ebf4-201ENSMUST00000110286 Rb1cc1Q9ESK9 1588 aa24.37■■□□□ 1.49
Ebf4-201ENSMUST00000110286 NacadQ5SWP3 1504 aa24.29■■□□□ 1.48
Ebf4-201ENSMUST00000110286 Rtl1Q7M732 1744 aa24.26■■□□□ 1.47
Ebf4-201ENSMUST00000110286 Baz1aO88379 1555 aa23.98■■□□□ 1.43
Ebf4-201ENSMUST00000110286 Ccdc180J3QNE4 1664 aa23.91■■□□□ 1.42
Ebf4-201ENSMUST00000110286 Ccdc136Q3TVA9 1136 aa23.83■■□□□ 1.41
Ebf4-201ENSMUST00000110286 Sycp2Q9CUU3 1500 aa23.8■■□□□ 1.4
Ebf4-201ENSMUST00000110286 Zcchc6Q5BLK4 1491 aaKnown RBP23.79■■□□□ 1.4
Ebf4-201ENSMUST00000110286 Crybg2B7ZCC2 1516 aa23.46■■□□□ 1.35
Ebf4-201ENSMUST00000110286 BicraF8VPZ9 1578 aa23.41■■□□□ 1.34
Ebf4-201ENSMUST00000110286 Smarca2Q6DIC0 1577 aa23.39■■□□□ 1.33
Ebf4-201ENSMUST00000110286 Cecr2E9Q2Z1 1453 aa23.18■■□□□ 1.3
Ebf4-201ENSMUST00000110286 Trim41Q5NCC3 630 aa23.06■■□□□ 1.28
Ebf4-201ENSMUST00000110286 HrcG5E8J6 738 aa22.91■■□□□ 1.26
Ebf4-201ENSMUST00000110286 Brd4Q9ESU6 1400 aaKnown RBP22.82■■□□□ 1.24
Ebf4-201ENSMUST00000110286 Synj1Q8CHC4 1574 aa22.8■■□□□ 1.24
Ebf4-201ENSMUST00000110286 Cngb1E1AZ71 1325 aa22.8■■□□□ 1.24
Ebf4-201ENSMUST00000110286 Esf1Q3V1V3 845 aaKnown RBP22.7■■□□□ 1.22
Ebf4-201ENSMUST00000110286 CftrP26361 1476 aa22.67■■□□□ 1.22
Ebf4-201ENSMUST00000110286 Smarca4Q3TKT4 1613 aaKnown RBP22.67■■□□□ 1.22
Ebf4-201ENSMUST00000110286 Ehmt2Q9Z148 1263 aaKnown RBP22.6■■□□□ 1.21
Ebf4-201ENSMUST00000110286 Cttnbp2B9EJA2 1648 aa22.49■■□□□ 1.19
Ebf4-201ENSMUST00000110286 Chic1Q8CBW7 227 aa22.47■■□□□ 1.19
Ebf4-201ENSMUST00000110286 Iqgap2Q3UQ44 1575 aa22.47■■□□□ 1.19
Ebf4-201ENSMUST00000110286 Golga3P55937 1487 aa22.44■■□□□ 1.18
Ebf4-201ENSMUST00000110286 Atad2bE9Q166 1460 aaKnown RBP22.42■■□□□ 1.18
Ebf4-201ENSMUST00000110286 Rpgrip1Q9EPQ2 1331 aa22.41■■□□□ 1.18
Ebf4-201ENSMUST00000110286 Pds5bQ4VA53 1446 aaKnown RBP22.4■■□□□ 1.18
Ebf4-201ENSMUST00000110286 Rsf1E9PWW9 1441 aaKnown RBP22.39■■□□□ 1.17
Ebf4-201ENSMUST00000110286 Ccdc88bQ4QRL3 1481 aa22.35■■□□□ 1.17
Ebf4-201ENSMUST00000110286 Acin1Q9JIX8 1338 aaKnown RBP22.34■■□□□ 1.17
Ebf4-201ENSMUST00000110286 Gab3Q8BSM5 595 aa22.32■■□□□ 1.16
Ebf4-201ENSMUST00000110286 Cep164Q5DU05 1446 aa22.26■■□□□ 1.15
Ebf4-201ENSMUST00000110286 Top2bQ64511 1612 aa22.2■■□□□ 1.14
Ebf4-201ENSMUST00000110286 Cc2d2aQ8CFW7 1633 aa22.17■■□□□ 1.14
Ebf4-201ENSMUST00000110286 Frmpd1A2AKB4 1549 aa22.12■■□□□ 1.13
Ebf4-201ENSMUST00000110286 Wdr62Q3U3T8 1523 aa22.06■■□□□ 1.12
Ebf4-201ENSMUST00000110286 Ercc6F8VPZ5 1481 aa22.05■■□□□ 1.12
Ebf4-201ENSMUST00000110286 Fmn1Q05860 1466 aa21.91■■□□□ 1.1
Ebf4-201ENSMUST00000110286 Il27Q8K3I6 234 aa21.86■■□□□ 1.09
Ebf4-201ENSMUST00000110286 Unc13aQ4KUS2 1712 aa21.85■■□□□ 1.09
Ebf4-201ENSMUST00000110286 Thoc2B1AZI6 1594 aaKnown RBP21.84■■□□□ 1.09
Ebf4-201ENSMUST00000110286 Kif15Q6P9L6 1387 aa21.81■■□□□ 1.08
Ebf4-201ENSMUST00000110286 Dnajc5bQ9CQ94 199 aa21.76■■□□□ 1.07
Ebf4-201ENSMUST00000110286 Top2aQ01320 1528 aaKnown RBP21.73■■□□□ 1.07
Ebf4-201ENSMUST00000110286 Ubl4bQ9CQ84 188 aa21.72■■□□□ 1.07
Ebf4-201ENSMUST00000110286 Phldb1Q6PDH0 1371 aaKnown RBP21.69■■□□□ 1.06
Ebf4-201ENSMUST00000110286 TnnQ80Z71 1560 aa21.67■■□□□ 1.06
Ebf4-201ENSMUST00000110286 Npm2Q80W85 207 aa21.65■■□□□ 1.06
Ebf4-201ENSMUST00000110286 Lamc3Q9R0B6 1581 aa21.64■■□□□ 1.06
Ebf4-201ENSMUST00000110286 Myt1lP97500 1187 aa21.64■■□□□ 1.05
Ebf4-201ENSMUST00000110286 Rapgef2Q8CHG7 1496 aa21.56■■□□□ 1.04
Ebf4-201ENSMUST00000110286 Cux2P70298 1426 aa21.52■■□□□ 1.04
Ebf4-201ENSMUST00000110286 Fam135aQ6NS59 1506 aa21.51■■□□□ 1.03
Ebf4-201ENSMUST00000110286 Camsap1A2AHC3 1581 aa21.48■■□□□ 1.03
Ebf4-201ENSMUST00000110286 PtprkP35822 1457 aa21.47■■□□□ 1.03
Ebf4-201ENSMUST00000110286 Cep162Q6ZQ06 1403 aa21.44■■□□□ 1.02
Ebf4-201ENSMUST00000110286 Npm1Q61937 292 aaKnown RBP21.44■■□□□ 1.02
Ebf4-201ENSMUST00000110286 Pcgf6Q99NA9 353 aa21.42■■□□□ 1.02
Ebf4-201ENSMUST00000110286 Ccdc18Q640L5 1455 aa21.42■■□□□ 1.02
Ebf4-201ENSMUST00000110286 Zeb1Q64318 1117 aa21.36■■□□□ 1.01
Ebf4-201ENSMUST00000110286 Mier1Q5UAK0 511 aa21.31■■□□□ 1
Ebf4-201ENSMUST00000110286 Grin2bQ01097 1482 aa21.3■■□□□ 1
Ebf4-201ENSMUST00000110286 Shroom4Q1W617 1475 aa21.24■□□□□ 0.99
Ebf4-201ENSMUST00000110286 Arhgap35Q91YM2 1499 aa21.23■□□□□ 0.99
Ebf4-201ENSMUST00000110286 LrpprcQ6PB66 1392 aaKnown RBP21.21■□□□□ 0.99
Ebf4-201ENSMUST00000110286 NrkQ9R0G8 1455 aa21.2■□□□□ 0.98
Ebf4-201ENSMUST00000110286 Supt5hO55201 1082 aaKnown RBP21.2■□□□□ 0.98
Ebf4-201ENSMUST00000110286 Eif4g1Q6NZJ6 1600 aaKnown RBP21.19■□□□□ 0.98
Ebf4-201ENSMUST00000110286 Ap3b1Q9Z1T1 1105 aa21.16■□□□□ 0.98
Ebf4-201ENSMUST00000110286 Mrc2Q64449 1479 aa21.15■□□□□ 0.98
Ebf4-201ENSMUST00000110286 Baz1bQ9Z277 1479 aa21.14■□□□□ 0.97
Ebf4-201ENSMUST00000110286 Dhx29Q6PGC1 1365 aaKnown RBP21.13■□□□□ 0.97
Ebf4-201ENSMUST00000110286 UbtfP25976 765 aaKnown RBP21.12■□□□□ 0.97
Ebf4-201ENSMUST00000110286 PogzQ8BZH4 1409 aaKnown RBP21.12■□□□□ 0.97
Ebf4-201ENSMUST00000110286 Duox2A2AQ99 1517 aa21.12■□□□□ 0.97
Ebf4-201ENSMUST00000110286 Clip1Q922J3 1391 aa21.1■□□□□ 0.97
Ebf4-201ENSMUST00000110286 Plekhg3Q4VAC9 1341 aa21.09■□□□□ 0.97
Ebf4-201ENSMUST00000110286 Kif21aQ9QXL2 1672 aa21.09■□□□□ 0.97
Ebf4-201ENSMUST00000110286 NefmP08553 848 aa21.05■□□□□ 0.96
Ebf4-201ENSMUST00000110286 Mroh2bQ7M6Y6 1581 aa21.02■□□□□ 0.96
Ebf4-201ENSMUST00000110286 Efcab5A0JP43 1406 aa21.01■□□□□ 0.95
Ebf4-201ENSMUST00000110286 Samd9lQ69Z37 1561 aa21■□□□□ 0.95
Ebf4-201ENSMUST00000110286 Rad54l2Q99NG0 1466 aa20.98■□□□□ 0.95
Ebf4-201ENSMUST00000110286 Setd5Q5XJV7 1441 aa20.94■□□□□ 0.94
Ebf4-201ENSMUST00000110286 Crocc2F6XLV1 1638 aa20.94■□□□□ 0.94
Ebf4-201ENSMUST00000110286 Map3k1P53349 1493 aa20.93■□□□□ 0.94
Ebf4-201ENSMUST00000110286 Arap1Q4LDD4 1452 aa20.9■□□□□ 0.94
Ebf4-201ENSMUST00000110286 Eea1Q8BL66 1411 aa20.9■□□□□ 0.94
Ebf4-201ENSMUST00000110286 Plb1Q3TTY0 1478 aa20.89■□□□□ 0.93
Ebf4-201ENSMUST00000110286 SynmQ70IV5 1561 aa20.82■□□□□ 0.92
Ebf4-201ENSMUST00000110286 Cux1P53564 1515 aa20.81■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms