RNA–Protein interactions for RNA: ENSMUST00000107538.1

Cdk12-202, Transcript of Cyclin-dependent kinase 12, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cdk12, Length 5,143 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk12-202ENSMUST00000107538 NischQ80TM9 1593 aa17.93■□□□□ 0.46
Cdk12-202ENSMUST00000107538 Gm35339A0A140LHH9 1649 aa17.5■□□□□ 0.39
Cdk12-202ENSMUST00000107538 Abcc9P70170 1546 aa17.16■□□□□ 0.34
Cdk12-202ENSMUST00000107538 Rhox8Q6VSS7 320 aa16.99■□□□□ 0.31
Cdk12-202ENSMUST00000107538 Abcc8B2RUS7 1588 aa16.94■□□□□ 0.3
Cdk12-202ENSMUST00000107538 NacadQ5SWP3 1504 aa16.27■□□□□ 0.2
Cdk12-202ENSMUST00000107538 Dcaf1Q80TR8 1506 aa16.11■□□□□ 0.17
Cdk12-202ENSMUST00000107538 Trim41Q5NCC3 630 aa15.79■□□□□ 0.12
Cdk12-202ENSMUST00000107538 Rb1cc1Q9ESK9 1588 aa15.75■□□□□ 0.11
Cdk12-202ENSMUST00000107538 Kdm5dQ62240 1548 aa15.73■□□□□ 0.11
Cdk12-202ENSMUST00000107538 Rtl1Q7M732 1744 aa15.71■□□□□ 0.1
Cdk12-202ENSMUST00000107538 Zcchc6Q5BLK4 1491 aaKnown RBP15.69■□□□□ 0.1
Cdk12-202ENSMUST00000107538 Esf1Q3V1V3 845 aaKnown RBP15.68■□□□□ 0.1
Cdk12-202ENSMUST00000107538 Sycp2Q9CUU3 1500 aa15.6■□□□□ 0.09
Cdk12-202ENSMUST00000107538 Pds5bQ4VA53 1446 aaKnown RBP15.6■□□□□ 0.09
Cdk12-202ENSMUST00000107538 ScribQ80U72 1612 aa15.59■□□□□ 0.09
Cdk12-202ENSMUST00000107538 Crybg2B7ZCC2 1516 aa15.57■□□□□ 0.08
Cdk12-202ENSMUST00000107538 Ercc6F8VPZ5 1481 aa15.56■□□□□ 0.08
Cdk12-202ENSMUST00000107538 Baz1aO88379 1555 aa15.56■□□□□ 0.08
Cdk12-202ENSMUST00000107538 Ccdc180J3QNE4 1664 aa15.55■□□□□ 0.08
Cdk12-202ENSMUST00000107538 Brd4Q9ESU6 1400 aaKnown RBP15.37■□□□□ 0.05
Cdk12-202ENSMUST00000107538 Baz1bQ9Z277 1479 aa15.25■□□□□ 0.03
Cdk12-202ENSMUST00000107538 Ccdc136Q3TVA9 1136 aa15.23■□□□□ 0.03
Cdk12-202ENSMUST00000107538 Cngb1E1AZ71 1325 aa15.21■□□□□ 0.02
Cdk12-202ENSMUST00000107538 Smarca2Q6DIC0 1577 aa15.21■□□□□ 0.02
Cdk12-202ENSMUST00000107538 Atad2bE9Q166 1460 aaKnown RBP15.19■□□□□ 0.02
Cdk12-202ENSMUST00000107538 Npm1Q61937 292 aaKnown RBP15.06■□□□□ 0
Cdk12-202ENSMUST00000107538 Ubl4bQ9CQ84 188 aa15.01□□□□□ -0.01
Cdk12-202ENSMUST00000107538 Smarca4Q3TKT4 1613 aaKnown RBP14.98□□□□□ -0.01
Cdk12-202ENSMUST00000107538 Zeb1Q64318 1117 aa14.98□□□□□ -0.01
Cdk12-202ENSMUST00000107538 Rsf1E9PWW9 1441 aaKnown RBP14.95□□□□□ -0.02
Cdk12-202ENSMUST00000107538 Phldb1Q6PDH0 1371 aaKnown RBP14.95□□□□□ -0.02
Cdk12-202ENSMUST00000107538 Npm2Q80W85 207 aa14.89□□□□□ -0.03
Cdk12-202ENSMUST00000107538 Cep164Q5DU05 1446 aa14.82□□□□□ -0.04
Cdk12-202ENSMUST00000107538 Ccdc18Q640L5 1455 aa14.8□□□□□ -0.04
Cdk12-202ENSMUST00000107538 Iqgap2Q3UQ44 1575 aa14.75□□□□□ -0.05
Cdk12-202ENSMUST00000107538 Cttnbp2B9EJA2 1648 aa14.72□□□□□ -0.05
Cdk12-202ENSMUST00000107538 Il27Q8K3I6 234 aa14.69□□□□□ -0.06
Cdk12-202ENSMUST00000107538 BicraF8VPZ9 1578 aa14.68□□□□□ -0.06
Cdk12-202ENSMUST00000107538 HrcG5E8J6 738 aa14.67□□□□□ -0.06
Cdk12-202ENSMUST00000107538 Kif15Q6P9L6 1387 aa14.66□□□□□ -0.06
Cdk12-202ENSMUST00000107538 Rpgrip1Q9EPQ2 1331 aa14.63□□□□□ -0.07
Cdk12-202ENSMUST00000107538 Golga3P55937 1487 aa14.57□□□□□ -0.08
Cdk12-202ENSMUST00000107538 CftrP26361 1476 aa14.56□□□□□ -0.08
Cdk12-202ENSMUST00000107538 Mrc2Q64449 1479 aa14.5□□□□□ -0.09
Cdk12-202ENSMUST00000107538 Wdr62Q3U3T8 1523 aa14.47□□□□□ -0.09
Cdk12-202ENSMUST00000107538 Fam135aQ6NS59 1506 aa14.45□□□□□ -0.1
Cdk12-202ENSMUST00000107538 Fmn1Q05860 1466 aa14.44□□□□□ -0.1
Cdk12-202ENSMUST00000107538 Cux2P70298 1426 aa14.41□□□□□ -0.1
Cdk12-202ENSMUST00000107538 Cc2d2aQ8CFW7 1633 aa14.41□□□□□ -0.1
Cdk12-202ENSMUST00000107538 Thoc2B1AZI6 1594 aaKnown RBP14.4□□□□□ -0.1
Cdk12-202ENSMUST00000107538 Cecr2E9Q2Z1 1453 aa14.36□□□□□ -0.11
Cdk12-202ENSMUST00000107538 Frmpd1A2AKB4 1549 aa14.35□□□□□ -0.11
Cdk12-202ENSMUST00000107538 Synj1Q8CHC4 1574 aa14.35□□□□□ -0.11
Cdk12-202ENSMUST00000107538 Ttbk1Q6PCN3 1308 aa14.31□□□□□ -0.12
Cdk12-202ENSMUST00000107538 Myt1lP97500 1187 aa14.29□□□□□ -0.12
Cdk12-202ENSMUST00000107538 Gab3Q8BSM5 595 aa14.27□□□□□ -0.13
Cdk12-202ENSMUST00000107538 Pelp1Q9DBD5 1123 aaKnown RBP14.26□□□□□ -0.13
Cdk12-202ENSMUST00000107538 Hdac5Q9Z2V6 1113 aa14.19□□□□□ -0.14
Cdk12-202ENSMUST00000107538 LrpprcQ6PB66 1392 aaKnown RBP14.18□□□□□ -0.14
Cdk12-202ENSMUST00000107538 Ift140E9PY46 1464 aa14.16□□□□□ -0.14
Cdk12-202ENSMUST00000107538 Cdk11bP24788 784 aaKnown RBP14.15□□□□□ -0.14
Cdk12-202ENSMUST00000107538 Pabpn1Q8CCS6 302 aaKnown RBP14.13□□□□□ -0.15
Cdk12-202ENSMUST00000107538 Lamc3Q9R0B6 1581 aa14.11□□□□□ -0.15
Cdk12-202ENSMUST00000107538 Dhx29Q6PGC1 1365 aaKnown RBP14.11□□□□□ -0.15
Cdk12-202ENSMUST00000107538 Rpap1Q80TE0 1409 aa14.06□□□□□ -0.16
Cdk12-202ENSMUST00000107538 Efcab5A0JP43 1406 aa14.05□□□□□ -0.16
Cdk12-202ENSMUST00000107538 Cc2d2bA0A286YDU8 1405 aa14.05□□□□□ -0.16
Cdk12-202ENSMUST00000107538 Polr1aO35134 1717 aaKnown RBP13.99□□□□□ -0.17
Cdk12-202ENSMUST00000107538 Ube2uB1AUC4 352 aa13.98□□□□□ -0.17
Cdk12-202ENSMUST00000107538 Urb2E9Q7L1 1524 aaKnown RBP13.97□□□□□ -0.17
Cdk12-202ENSMUST00000107538 Las1lA2BE28 776 aaKnown RBP13.97□□□□□ -0.17
Cdk12-202ENSMUST00000107538 Crocc2F6XLV1 1638 aa13.96□□□□□ -0.17
Cdk12-202ENSMUST00000107538 Clip1Q922J3 1391 aa13.95□□□□□ -0.18
Cdk12-202ENSMUST00000107538 NclP09405 707 aaKnown RBP13.94□□□□□ -0.18
Cdk12-202ENSMUST00000107538 Dhx57Q6P5D3 1388 aaKnown RBP13.94□□□□□ -0.18
Cdk12-202ENSMUST00000107538 PogzQ8BZH4 1409 aaKnown RBP13.94□□□□□ -0.18
Cdk12-202ENSMUST00000107538 NrkQ9R0G8 1455 aa13.93□□□□□ -0.18
Cdk12-202ENSMUST00000107538 Carmil1Q6EDY6 1374 aa13.92□□□□□ -0.18
Cdk12-202ENSMUST00000107538 Rsph4aQ8BYM7 716 aa13.9□□□□□ -0.18
Cdk12-202ENSMUST00000107538 Pbrm1Q8BSQ9 1634 aaKnown RBP13.9□□□□□ -0.18
Cdk12-202ENSMUST00000107538 Fgd6Q69ZL1 1399 aa13.9□□□□□ -0.18
Cdk12-202ENSMUST00000107538 Camsap1A2AHC3 1581 aa13.86□□□□□ -0.19
Cdk12-202ENSMUST00000107538 Arhgap27A2AB59 869 aa13.86□□□□□ -0.19
Cdk12-202ENSMUST00000107538 Ccdc88bQ4QRL3 1481 aa13.86□□□□□ -0.19
Cdk12-202ENSMUST00000107538 AknaQ80VW7 1404 aa13.85□□□□□ -0.19
Cdk12-202ENSMUST00000107538 Top2bQ64511 1612 aa13.84□□□□□ -0.19
Cdk12-202ENSMUST00000107538 CadpsQ80TJ1 1355 aa13.84□□□□□ -0.19
Cdk12-202ENSMUST00000107538 Duox2A2AQ99 1517 aa13.83□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Ncoa2Q61026 1462 aa13.82□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Grin2bQ01097 1482 aa13.82□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Shroom4Q1W617 1475 aa13.81□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Clstn2Q9ER65 966 aa13.8□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Ehmt2Q9Z148 1263 aaKnown RBP13.78□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Eea1Q8BL66 1411 aa13.78□□□□□ -0.2
Cdk12-202ENSMUST00000107538 Fyco1Q8VDC1 1437 aa13.77□□□□□ -0.21
Cdk12-202ENSMUST00000107538 TnnQ80Z71 1560 aa13.76□□□□□ -0.21
Cdk12-202ENSMUST00000107538 Dnajc5bQ9CQ94 199 aa13.76□□□□□ -0.21
Cdk12-202ENSMUST00000107538 Soga1E1U8D0 1418 aa13.76□□□□□ -0.21
Cdk12-202ENSMUST00000107538 Top2aQ01320 1528 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms