RNA–Protein interactions for RNA: ENSMUST00000107201.8

Cdc42se1-204, Transcript of CDC42 small effector protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc42se1, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42se1-204ENSMUST00000107201 Gm35339A0A140LHH9 1649 aa26.8■■□□□ 1.88
Cdc42se1-204ENSMUST00000107201 NischQ80TM9 1593 aa26.44■■□□□ 1.82
Cdc42se1-204ENSMUST00000107201 Abcc9P70170 1546 aa26.21■■□□□ 1.79
Cdc42se1-204ENSMUST00000107201 Abcc8B2RUS7 1588 aa25.66■■□□□ 1.7
Cdc42se1-204ENSMUST00000107201 ScribQ80U72 1612 aa25.15■■□□□ 1.62
Cdc42se1-204ENSMUST00000107201 Dnajc5bQ9CQ94 199 aa25.09■■□□□ 1.61
Cdc42se1-204ENSMUST00000107201 NacadQ5SWP3 1504 aa24.16■■□□□ 1.46
Cdc42se1-204ENSMUST00000107201 Kdm5dQ62240 1548 aa24.01■■□□□ 1.43
Cdc42se1-204ENSMUST00000107201 Dnajc5P60904 198 aa23.87■■□□□ 1.41
Cdc42se1-204ENSMUST00000107201 Sycp2Q9CUU3 1500 aa23.78■■□□□ 1.4
Cdc42se1-204ENSMUST00000107201 BicraF8VPZ9 1578 aa23.69■■□□□ 1.38
Cdc42se1-204ENSMUST00000107201 Thoc2B1AZI6 1594 aaKnown RBP23.5■■□□□ 1.35
Cdc42se1-204ENSMUST00000107201 Dcaf1Q80TR8 1506 aa23.46■■□□□ 1.35
Cdc42se1-204ENSMUST00000107201 Pds5bQ4VA53 1446 aaKnown RBP23.23■■□□□ 1.31
Cdc42se1-204ENSMUST00000107201 Cc2d2aQ8CFW7 1633 aa23.08■■□□□ 1.29
Cdc42se1-204ENSMUST00000107201 Trim41Q5NCC3 630 aa23■■□□□ 1.27
Cdc42se1-204ENSMUST00000107201 Rb1cc1Q9ESK9 1588 aa22.98■■□□□ 1.27
Cdc42se1-204ENSMUST00000107201 Atad2bE9Q166 1460 aaKnown RBP22.77■■□□□ 1.24
Cdc42se1-204ENSMUST00000107201 Rhox8Q6VSS7 320 aa22.7■■□□□ 1.22
Cdc42se1-204ENSMUST00000107201 Fam135aQ6NS59 1506 aa22.7■■□□□ 1.22
Cdc42se1-204ENSMUST00000107201 Ercc6F8VPZ5 1481 aa22.65■■□□□ 1.22
Cdc42se1-204ENSMUST00000107201 Baz1aO88379 1555 aa22.63■■□□□ 1.21
Cdc42se1-204ENSMUST00000107201 Crybg2B7ZCC2 1516 aa22.63■■□□□ 1.21
Cdc42se1-204ENSMUST00000107201 Ccdc180J3QNE4 1664 aa22.46■■□□□ 1.19
Cdc42se1-204ENSMUST00000107201 Zcchc6Q5BLK4 1491 aaKnown RBP22.43■■□□□ 1.18
Cdc42se1-204ENSMUST00000107201 Smarca2Q6DIC0 1577 aa22.34■■□□□ 1.17
Cdc42se1-204ENSMUST00000107201 Phldb1Q6PDH0 1371 aaKnown RBP22.33■■□□□ 1.17
Cdc42se1-204ENSMUST00000107201 Baz1bQ9Z277 1479 aa22.33■■□□□ 1.16
Cdc42se1-204ENSMUST00000107201 Ubl4bQ9CQ84 188 aa22.24■■□□□ 1.15
Cdc42se1-204ENSMUST00000107201 Mrc2Q64449 1479 aa22.18■■□□□ 1.14
Cdc42se1-204ENSMUST00000107201 Frmpd1A2AKB4 1549 aa22.17■■□□□ 1.14
Cdc42se1-204ENSMUST00000107201 Smarca4Q3TKT4 1613 aaKnown RBP22.16■■□□□ 1.14
Cdc42se1-204ENSMUST00000107201 Wdr62Q3U3T8 1523 aa22.15■■□□□ 1.14
Cdc42se1-204ENSMUST00000107201 Cecr2E9Q2Z1 1453 aa22.13■■□□□ 1.13
Cdc42se1-204ENSMUST00000107201 Iqgap2Q3UQ44 1575 aa22.12■■□□□ 1.13
Cdc42se1-204ENSMUST00000107201 Col17a1Q07563 1470 aa21.96■■□□□ 1.11
Cdc42se1-204ENSMUST00000107201 Shroom2A2ALU4 1481 aa21.95■■□□□ 1.1
Cdc42se1-204ENSMUST00000107201 Rsf1E9PWW9 1441 aaKnown RBP21.77■■□□□ 1.08
Cdc42se1-204ENSMUST00000107201 Lrriq1Q0P5X1 1673 aa21.76■■□□□ 1.07
Cdc42se1-204ENSMUST00000107201 Unc13aQ4KUS2 1712 aa21.7■■□□□ 1.06
Cdc42se1-204ENSMUST00000107201 Pcdh10E9PXQ7 1057 aa21.61■■□□□ 1.05
Cdc42se1-204ENSMUST00000107201 Pabpn1Q8CCS6 302 aaKnown RBP21.54■■□□□ 1.04
Cdc42se1-204ENSMUST00000107201 CftrP26361 1476 aa21.52■■□□□ 1.04
Cdc42se1-204ENSMUST00000107201 Top2bQ64511 1612 aa21.41■■□□□ 1.02
Cdc42se1-204ENSMUST00000107201 Eif4g3Q80XI3 1579 aaKnown RBP21.41■■□□□ 1.02
Cdc42se1-204ENSMUST00000107201 Synj1Q8CHC4 1574 aa21.41■■□□□ 1.02
Cdc42se1-204ENSMUST00000107201 Cttnbp2B9EJA2 1648 aa21.39■■□□□ 1.01
Cdc42se1-204ENSMUST00000107201 Ccdc136Q3TVA9 1136 aa21.36■■□□□ 1.01
Cdc42se1-204ENSMUST00000107201 Brd4Q9ESU6 1400 aaKnown RBP21.35■■□□□ 1.01
Cdc42se1-204ENSMUST00000107201 Zcchc11B2RX14 1644 aaKnown RBP21.27■■□□□ 1
Cdc42se1-204ENSMUST00000107201 Kif21aQ9QXL2 1672 aa21.27■■□□□ 1
Cdc42se1-204ENSMUST00000107201 Pelp1Q9DBD5 1123 aaKnown RBP21.25■□□□□ 0.99
Cdc42se1-204ENSMUST00000107201 Cux2P70298 1426 aa21.23■□□□□ 0.99
Cdc42se1-204ENSMUST00000107201 Esf1Q3V1V3 845 aaKnown RBP21.21■□□□□ 0.99
Cdc42se1-204ENSMUST00000107201 Rtl1Q7M732 1744 aa21.18■□□□□ 0.98
Cdc42se1-204ENSMUST00000107201 Arhgef5E9Q7D5 1581 aa21.14■□□□□ 0.98
Cdc42se1-204ENSMUST00000107201 Kif15Q6P9L6 1387 aa21.13■□□□□ 0.97
Cdc42se1-204ENSMUST00000107201 Plb1Q3TTY0 1478 aa21.01■□□□□ 0.95
Cdc42se1-204ENSMUST00000107201 Npm1Q61937 292 aaKnown RBP20.99■□□□□ 0.95
Cdc42se1-204ENSMUST00000107201 Urb2E9Q7L1 1524 aaKnown RBP20.97■□□□□ 0.95
Cdc42se1-204ENSMUST00000107201 Ttbk1Q6PCN3 1308 aa20.94■□□□□ 0.94
Cdc42se1-204ENSMUST00000107201 Lamc3Q9R0B6 1581 aa20.9■□□□□ 0.94
Cdc42se1-204ENSMUST00000107201 Adgrl3Q80TS3 1537 aa20.88■□□□□ 0.93
Cdc42se1-204ENSMUST00000107201 Cep164Q5DU05 1446 aa20.8■□□□□ 0.92
Cdc42se1-204ENSMUST00000107201 PtprtQ99M80 1454 aa20.77■□□□□ 0.92
Cdc42se1-204ENSMUST00000107201 Il27Q8K3I6 234 aa20.75■□□□□ 0.91
Cdc42se1-204ENSMUST00000107201 Plekhg3Q4VAC9 1341 aa20.75■□□□□ 0.91
Cdc42se1-204ENSMUST00000107201 Gm156Q58A37 223 aa20.74■□□□□ 0.91
Cdc42se1-204ENSMUST00000107201 Rusc2Q80U22 1514 aa20.73■□□□□ 0.91
Cdc42se1-204ENSMUST00000107201 Dhx29Q6PGC1 1365 aaKnown RBP20.71■□□□□ 0.91
Cdc42se1-204ENSMUST00000107201 Cypt1Q8CH20 168 aa20.7■□□□□ 0.9
Cdc42se1-204ENSMUST00000107201 PtprkP35822 1457 aa20.65■□□□□ 0.9
Cdc42se1-204ENSMUST00000107201 LrpprcQ6PB66 1392 aaKnown RBP20.62■□□□□ 0.89
Cdc42se1-204ENSMUST00000107201 Ccdc18Q640L5 1455 aa20.61■□□□□ 0.89
Cdc42se1-204ENSMUST00000107201 Cep170Q6A065 1588 aa20.57■□□□□ 0.88
Cdc42se1-204ENSMUST00000107201 TnnQ80Z71 1560 aa20.55■□□□□ 0.88
Cdc42se1-204ENSMUST00000107201 Ift140E9PY46 1464 aa20.54■□□□□ 0.88
Cdc42se1-204ENSMUST00000107201 Cngb1E1AZ71 1325 aa20.53■□□□□ 0.88
Cdc42se1-204ENSMUST00000107201 Golga3P55937 1487 aa20.51■□□□□ 0.87
Cdc42se1-204ENSMUST00000107201 Gapvd1Q6PAR5 1458 aa20.5■□□□□ 0.87
Cdc42se1-204ENSMUST00000107201 Crocc2F6XLV1 1638 aa20.5■□□□□ 0.87
Cdc42se1-204ENSMUST00000107201 Camsap1A2AHC3 1581 aa20.49■□□□□ 0.87
Cdc42se1-204ENSMUST00000107201 Pprc1Q6NZN1 1644 aa20.46■□□□□ 0.87
Cdc42se1-204ENSMUST00000107201 PogzQ8BZH4 1409 aaKnown RBP20.44■□□□□ 0.86
Cdc42se1-204ENSMUST00000107201 Duox2A2AQ99 1517 aa20.36■□□□□ 0.85
Cdc42se1-204ENSMUST00000107201 Disp1Q3TDN0 1521 aa20.32■□□□□ 0.84
Cdc42se1-204ENSMUST00000107201 Fmn1Q05860 1466 aa20.3■□□□□ 0.84
Cdc42se1-204ENSMUST00000107201 Rapgef2Q8CHG7 1496 aa20.24■□□□□ 0.83
Cdc42se1-204ENSMUST00000107201 Fgd6Q69ZL1 1399 aa20.23■□□□□ 0.83
Cdc42se1-204ENSMUST00000107201 Ppp1r18Q8BQ30 594 aa20.23■□□□□ 0.83
Cdc42se1-204ENSMUST00000107201 Grin2bQ01097 1482 aa20.23■□□□□ 0.83
Cdc42se1-204ENSMUST00000107201 Cc2d2bA0A286YDU8 1405 aa20.22■□□□□ 0.83
Cdc42se1-204ENSMUST00000107201 Ythdc2B2RR83 1445 aaKnown RBP20.22■□□□□ 0.83
Cdc42se1-204ENSMUST00000107201 Nup160Q9Z0W3 1402 aaKnown RBP20.19■□□□□ 0.82
Cdc42se1-204ENSMUST00000107201 Efcab5A0JP43 1406 aa20.15■□□□□ 0.82
Cdc42se1-204ENSMUST00000107201 Setbp1Q9Z180 1582 aa20.15■□□□□ 0.82
Cdc42se1-204ENSMUST00000107201 Samd9lQ69Z37 1561 aa20.12■□□□□ 0.81
Cdc42se1-204ENSMUST00000107201 Setd1bQ8CFT2 1985 aa20.12■□□□□ 0.81
Cdc42se1-204ENSMUST00000107201 Cyb5rlB1AS42 316 aa20.12■□□□□ 0.81
Cdc42se1-204ENSMUST00000107201 Alpk3Q924C5 1678 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms