RNA–Protein interactions for RNA: ENSMUST00000103139.10

Thra-202, Transcript of Thyroid hormone receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Thra, Length 2,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thra-202ENSMUST00000103139 NischQ80TM9 1593 aa48.37■■■■■ 5.33
Thra-202ENSMUST00000103139 Gm35339A0A140LHH9 1649 aa48.29■■■■■ 5.32
Thra-202ENSMUST00000103139 Abcc9P70170 1546 aa47.04■■■■■ 5.12
Thra-202ENSMUST00000103139 Abcc8B2RUS7 1588 aa46.23■■■■■ 4.99
Thra-202ENSMUST00000103139 ScribQ80U72 1612 aa43.56■■■■■ 4.56
Thra-202ENSMUST00000103139 Rhox8Q6VSS7 320 aa43.46■■■■■ 4.55
Thra-202ENSMUST00000103139 Dcaf1Q80TR8 1506 aa43.14■■■■■ 4.5
Thra-202ENSMUST00000103139 Rtl1Q7M732 1744 aa42.7■■■■■ 4.43
Thra-202ENSMUST00000103139 Kdm5dQ62240 1548 aa42.54■■■■■ 4.4
Thra-202ENSMUST00000103139 NacadQ5SWP3 1504 aa42.38■■■■■ 4.37
Thra-202ENSMUST00000103139 Rb1cc1Q9ESK9 1588 aa42.35■■■■■ 4.37
Thra-202ENSMUST00000103139 Ccdc180J3QNE4 1664 aa42.18■■■■■ 4.34
Thra-202ENSMUST00000103139 Baz1aO88379 1555 aa41.87■■■■■ 4.29
Thra-202ENSMUST00000103139 Sycp2Q9CUU3 1500 aa41.46■■■■■ 4.23
Thra-202ENSMUST00000103139 Crybg2B7ZCC2 1516 aa41.38■■■■■ 4.22
Thra-202ENSMUST00000103139 Zcchc6Q5BLK4 1491 aaKnown RBP41.19■■■■■ 4.18
Thra-202ENSMUST00000103139 Smarca2Q6DIC0 1577 aa40.85■■■■■ 4.13
Thra-202ENSMUST00000103139 BicraF8VPZ9 1578 aa40.6■■■■■ 4.09
Thra-202ENSMUST00000103139 Ccdc136Q3TVA9 1136 aa40.35■■■■■ 4.05
Thra-202ENSMUST00000103139 Cecr2E9Q2Z1 1453 aa39.88■■■■□ 3.98
Thra-202ENSMUST00000103139 Trim41Q5NCC3 630 aa39.85■■■■□ 3.97
Thra-202ENSMUST00000103139 Brd4Q9ESU6 1400 aaKnown RBP39.76■■■■□ 3.95
Thra-202ENSMUST00000103139 Smarca4Q3TKT4 1613 aaKnown RBP39.52■■■■□ 3.92
Thra-202ENSMUST00000103139 HrcG5E8J6 738 aa39.5■■■■□ 3.91
Thra-202ENSMUST00000103139 Synj1Q8CHC4 1574 aa39.48■■■■□ 3.91
Thra-202ENSMUST00000103139 CftrP26361 1476 aa39.34■■■■□ 3.89
Thra-202ENSMUST00000103139 Cttnbp2B9EJA2 1648 aa39.34■■■■□ 3.89
Thra-202ENSMUST00000103139 Atad2bE9Q166 1460 aaKnown RBP39.06■■■■□ 3.84
Thra-202ENSMUST00000103139 Pds5bQ4VA53 1446 aaKnown RBP39.05■■■■□ 3.84
Thra-202ENSMUST00000103139 Iqgap2Q3UQ44 1575 aa39.05■■■■□ 3.84
Thra-202ENSMUST00000103139 Golga3P55937 1487 aa39.01■■■■□ 3.84
Thra-202ENSMUST00000103139 Top2bQ64511 1612 aa38.81■■■■□ 3.8
Thra-202ENSMUST00000103139 Cngb1E1AZ71 1325 aa38.76■■■■□ 3.8
Thra-202ENSMUST00000103139 Cep164Q5DU05 1446 aa38.76■■■■□ 3.79
Thra-202ENSMUST00000103139 Esf1Q3V1V3 845 aaKnown RBP38.69■■■■□ 3.78
Thra-202ENSMUST00000103139 Rsf1E9PWW9 1441 aaKnown RBP38.53■■■■□ 3.76
Thra-202ENSMUST00000103139 Wdr62Q3U3T8 1523 aa38.42■■■■□ 3.74
Thra-202ENSMUST00000103139 Ccdc88bQ4QRL3 1481 aa38.41■■■■□ 3.74
Thra-202ENSMUST00000103139 Cc2d2aQ8CFW7 1633 aa38.37■■■■□ 3.73
Thra-202ENSMUST00000103139 Ercc6F8VPZ5 1481 aa38.33■■■■□ 3.73
Thra-202ENSMUST00000103139 Frmpd1A2AKB4 1549 aa38.32■■■■□ 3.73
Thra-202ENSMUST00000103139 Chic1Q8CBW7 227 aa38.28■■■■□ 3.72
Thra-202ENSMUST00000103139 Fmn1Q05860 1466 aa38.22■■■■□ 3.71
Thra-202ENSMUST00000103139 Thoc2B1AZI6 1594 aaKnown RBP38.12■■■■□ 3.69
Thra-202ENSMUST00000103139 Unc13aQ4KUS2 1712 aa38■■■■□ 3.67
Thra-202ENSMUST00000103139 TnnQ80Z71 1560 aa37.97■■■■□ 3.67
Thra-202ENSMUST00000103139 Top2aQ01320 1528 aaKnown RBP37.9■■■■□ 3.66
Thra-202ENSMUST00000103139 Lamc3Q9R0B6 1581 aa37.81■■■■□ 3.64
Thra-202ENSMUST00000103139 Gab3Q8BSM5 595 aa37.68■■■■□ 3.62
Thra-202ENSMUST00000103139 Phldb1Q6PDH0 1371 aaKnown RBP37.65■■■■□ 3.62
Thra-202ENSMUST00000103139 Fam135aQ6NS59 1506 aa37.61■■■■□ 3.61
Thra-202ENSMUST00000103139 Rpgrip1Q9EPQ2 1331 aa37.55■■■■□ 3.6
Thra-202ENSMUST00000103139 Kif15Q6P9L6 1387 aa37.54■■■■□ 3.6
Thra-202ENSMUST00000103139 Rapgef2Q8CHG7 1496 aa37.47■■■■□ 3.59
Thra-202ENSMUST00000103139 Camsap1A2AHC3 1581 aa37.36■■■■□ 3.57
Thra-202ENSMUST00000103139 Ccdc18Q640L5 1455 aa37.22■■■■□ 3.55
Thra-202ENSMUST00000103139 Baz1bQ9Z277 1479 aa37.19■■■■□ 3.54
Thra-202ENSMUST00000103139 Acin1Q9JIX8 1338 aaKnown RBP37.18■■■■□ 3.54
Thra-202ENSMUST00000103139 Ubl4bQ9CQ84 188 aa37.16■■■■□ 3.54
Thra-202ENSMUST00000103139 Ehmt2Q9Z148 1263 aaKnown RBP37.16■■■■□ 3.54
Thra-202ENSMUST00000103139 Cep162Q6ZQ06 1403 aa37.12■■■■□ 3.53
Thra-202ENSMUST00000103139 Cux2P70298 1426 aa37.1■■■■□ 3.53
Thra-202ENSMUST00000103139 Eif4g1Q6NZJ6 1600 aaKnown RBP37.1■■■■□ 3.53
Thra-202ENSMUST00000103139 NrkQ9R0G8 1455 aa37.04■■■■□ 3.52
Thra-202ENSMUST00000103139 Grin2bQ01097 1482 aa36.99■■■■□ 3.51
Thra-202ENSMUST00000103139 Shroom4Q1W617 1475 aa36.96■■■■□ 3.51
Thra-202ENSMUST00000103139 Il27Q8K3I6 234 aa36.95■■■■□ 3.51
Thra-202ENSMUST00000103139 Npm2Q80W85 207 aa36.93■■■■□ 3.5
Thra-202ENSMUST00000103139 PtprkP35822 1457 aa36.9■■■■□ 3.5
Thra-202ENSMUST00000103139 Npm1Q61937 292 aaKnown RBP36.78■■■■□ 3.48
Thra-202ENSMUST00000103139 Arhgap35Q91YM2 1499 aa36.77■■■■□ 3.48
Thra-202ENSMUST00000103139 Mrc2Q64449 1479 aa36.72■■■■□ 3.47
Thra-202ENSMUST00000103139 Map3k1P53349 1493 aa36.71■■■■□ 3.47
Thra-202ENSMUST00000103139 LrpprcQ6PB66 1392 aaKnown RBP36.71■■■■□ 3.47
Thra-202ENSMUST00000103139 Dnajc5bQ9CQ94 199 aa36.67■■■■□ 3.46
Thra-202ENSMUST00000103139 PogzQ8BZH4 1409 aaKnown RBP36.65■■■■□ 3.46
Thra-202ENSMUST00000103139 Myt1lP97500 1187 aa36.62■■■■□ 3.45
Thra-202ENSMUST00000103139 Efcab5A0JP43 1406 aa36.61■■■■□ 3.45
Thra-202ENSMUST00000103139 Duox2A2AQ99 1517 aa36.54■■■■□ 3.44
Thra-202ENSMUST00000103139 Mroh2bQ7M6Y6 1581 aa36.54■■■■□ 3.44
Thra-202ENSMUST00000103139 Kif21aQ9QXL2 1672 aa36.51■■■■□ 3.44
Thra-202ENSMUST00000103139 Dhx29Q6PGC1 1365 aaKnown RBP36.46■■■■□ 3.43
Thra-202ENSMUST00000103139 AqrQ8CFQ3 1481 aaKnown RBP36.43■■■■□ 3.42
Thra-202ENSMUST00000103139 Crocc2F6XLV1 1638 aa36.39■■■■□ 3.42
Thra-202ENSMUST00000103139 Clip1Q922J3 1391 aa36.35■■■■□ 3.41
Thra-202ENSMUST00000103139 Samd9lQ69Z37 1561 aa36.35■■■■□ 3.41
Thra-202ENSMUST00000103139 Zeb1Q64318 1117 aa36.3■■■■□ 3.4
Thra-202ENSMUST00000103139 Eea1Q8BL66 1411 aa36.25■■■■□ 3.39
Thra-202ENSMUST00000103139 SynmQ70IV5 1561 aa36.25■■■■□ 3.39
Thra-202ENSMUST00000103139 Erich3F6QRE9 1637 aa36.18■■■■□ 3.38
Thra-202ENSMUST00000103139 Carmil1Q6EDY6 1374 aa36.18■■■■□ 3.38
Thra-202ENSMUST00000103139 Arap1Q4LDD4 1452 aa36.11■■■■□ 3.37
Thra-202ENSMUST00000103139 Ankrd26Q811D2 1581 aa36.11■■■■□ 3.37
Thra-202ENSMUST00000103139 Setd5Q5XJV7 1441 aa36.07■■■■□ 3.37
Thra-202ENSMUST00000103139 Arhgef5E9Q7D5 1581 aa36.05■■■■□ 3.36
Thra-202ENSMUST00000103139 Polr1aO35134 1717 aaKnown RBP36■■■■□ 3.35
Thra-202ENSMUST00000103139 Rad54l2Q99NG0 1466 aa35.99■■■■□ 3.35
Thra-202ENSMUST00000103139 Plb1Q3TTY0 1478 aa35.98■■■■□ 3.35
Thra-202ENSMUST00000103139 Urb2E9Q7L1 1524 aaKnown RBP35.95■■■■□ 3.34
Thra-202ENSMUST00000103139 Cux1P53564 1515 aa35.95■■■■□ 3.34
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms