RNA–Protein interactions for RNA: ENSMUST00000079390.6

Lin28b-201, Transcript of Protein lin-28 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lin28b, Length 5,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28b-201ENSMUST00000079390 NischQ80TM9 1593 aa9.34□□□□□ -0.91
Lin28b-201ENSMUST00000079390 Gm35339A0A140LHH9 1649 aa9.01□□□□□ -0.97
Lin28b-201ENSMUST00000079390 Abcc9P70170 1546 aa8.95□□□□□ -0.98
Lin28b-201ENSMUST00000079390 Abcc8B2RUS7 1588 aa8.87□□□□□ -0.99
Lin28b-201ENSMUST00000079390 Rhox8Q6VSS7 320 aa8.85□□□□□ -0.99
Lin28b-201ENSMUST00000079390 ScribQ80U72 1612 aa8.34□□□□□ -1.07
Lin28b-201ENSMUST00000079390 Rtl1Q7M732 1744 aa8.24□□□□□ -1.09
Lin28b-201ENSMUST00000079390 Ccdc136Q3TVA9 1136 aa8.23□□□□□ -1.09
Lin28b-201ENSMUST00000079390 Kdm5dQ62240 1548 aa8.21□□□□□ -1.1
Lin28b-201ENSMUST00000079390 NacadQ5SWP3 1504 aa8.18□□□□□ -1.1
Lin28b-201ENSMUST00000079390 Rb1cc1Q9ESK9 1588 aa8.15□□□□□ -1.1
Lin28b-201ENSMUST00000079390 Dcaf1Q80TR8 1506 aa8.12□□□□□ -1.11
Lin28b-201ENSMUST00000079390 Zcchc6Q5BLK4 1491 aaKnown RBP8.1□□□□□ -1.11
Lin28b-201ENSMUST00000079390 Baz1aO88379 1555 aa8.01□□□□□ -1.13
Lin28b-201ENSMUST00000079390 Ccdc180J3QNE4 1664 aa8□□□□□ -1.13
Lin28b-201ENSMUST00000079390 Sycp2Q9CUU3 1500 aa7.99□□□□□ -1.13
Lin28b-201ENSMUST00000079390 Trim41Q5NCC3 630 aa7.94□□□□□ -1.14
Lin28b-201ENSMUST00000079390 Esf1Q3V1V3 845 aaKnown RBP7.9□□□□□ -1.15
Lin28b-201ENSMUST00000079390 Cngb1E1AZ71 1325 aa7.87□□□□□ -1.15
Lin28b-201ENSMUST00000079390 Crybg2B7ZCC2 1516 aa7.84□□□□□ -1.15
Lin28b-201ENSMUST00000079390 BicraF8VPZ9 1578 aa7.81□□□□□ -1.16
Lin28b-201ENSMUST00000079390 Cecr2E9Q2Z1 1453 aa7.8□□□□□ -1.16
Lin28b-201ENSMUST00000079390 Smarca2Q6DIC0 1577 aa7.78□□□□□ -1.16
Lin28b-201ENSMUST00000079390 Brd4Q9ESU6 1400 aaKnown RBP7.73□□□□□ -1.17
Lin28b-201ENSMUST00000079390 Gab3Q8BSM5 595 aa7.71□□□□□ -1.18
Lin28b-201ENSMUST00000079390 HrcG5E8J6 738 aa7.69□□□□□ -1.18
Lin28b-201ENSMUST00000079390 Chic1Q8CBW7 227 aa7.65□□□□□ -1.18
Lin28b-201ENSMUST00000079390 Ehmt2Q9Z148 1263 aaKnown RBP7.64□□□□□ -1.19
Lin28b-201ENSMUST00000079390 CftrP26361 1476 aa7.63□□□□□ -1.19
Lin28b-201ENSMUST00000079390 Synj1Q8CHC4 1574 aa7.62□□□□□ -1.19
Lin28b-201ENSMUST00000079390 Pds5bQ4VA53 1446 aaKnown RBP7.62□□□□□ -1.19
Lin28b-201ENSMUST00000079390 Il27Q8K3I6 234 aa7.61□□□□□ -1.19
Lin28b-201ENSMUST00000079390 Smarca4Q3TKT4 1613 aaKnown RBP7.6□□□□□ -1.19
Lin28b-201ENSMUST00000079390 Atad2bE9Q166 1460 aaKnown RBP7.59□□□□□ -1.19
Lin28b-201ENSMUST00000079390 Golga3P55937 1487 aa7.56□□□□□ -1.2
Lin28b-201ENSMUST00000079390 Iqgap2Q3UQ44 1575 aa7.54□□□□□ -1.2
Lin28b-201ENSMUST00000079390 Ubl4bQ9CQ84 188 aa7.53□□□□□ -1.2
Lin28b-201ENSMUST00000079390 Rsf1E9PWW9 1441 aaKnown RBP7.53□□□□□ -1.2
Lin28b-201ENSMUST00000079390 Npm2Q80W85 207 aa7.52□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Ccdc88bQ4QRL3 1481 aa7.51□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Myt1lP97500 1187 aa7.51□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Ercc6F8VPZ5 1481 aa7.5□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Dnajc5bQ9CQ94 199 aa7.5□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Cttnbp2B9EJA2 1648 aa7.5□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Cep164Q5DU05 1446 aa7.47□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Zeb1Q64318 1117 aa7.46□□□□□ -1.21
Lin28b-201ENSMUST00000079390 Kif15Q6P9L6 1387 aa7.46□□□□□ -1.22
Lin28b-201ENSMUST00000079390 Frmpd1A2AKB4 1549 aa7.46□□□□□ -1.22
Lin28b-201ENSMUST00000079390 Npm1Q61937 292 aaKnown RBP7.45□□□□□ -1.22
Lin28b-201ENSMUST00000079390 Phldb1Q6PDH0 1371 aaKnown RBP7.4□□□□□ -1.22
Lin28b-201ENSMUST00000079390 Wdr62Q3U3T8 1523 aa7.39□□□□□ -1.23
Lin28b-201ENSMUST00000079390 Fmn1Q05860 1466 aa7.37□□□□□ -1.23
Lin28b-201ENSMUST00000079390 Cc2d2aQ8CFW7 1633 aa7.36□□□□□ -1.23
Lin28b-201ENSMUST00000079390 Top2bQ64511 1612 aa7.34□□□□□ -1.23
Lin28b-201ENSMUST00000079390 Cux2P70298 1426 aa7.34□□□□□ -1.23
Lin28b-201ENSMUST00000079390 Ap3b1Q9Z1T1 1105 aa7.31□□□□□ -1.24
Lin28b-201ENSMUST00000079390 Ccdc18Q640L5 1455 aa7.3□□□□□ -1.24
Lin28b-201ENSMUST00000079390 Thoc2B1AZI6 1594 aaKnown RBP7.29□□□□□ -1.24
Lin28b-201ENSMUST00000079390 UbtfP25976 765 aaKnown RBP7.28□□□□□ -1.24
Lin28b-201ENSMUST00000079390 Rapgef2Q8CHG7 1496 aa7.25□□□□□ -1.25
Lin28b-201ENSMUST00000079390 Rpgrip1Q9EPQ2 1331 aa7.24□□□□□ -1.25
Lin28b-201ENSMUST00000079390 Top2aQ01320 1528 aaKnown RBP7.24□□□□□ -1.25
Lin28b-201ENSMUST00000079390 Plekhg3Q4VAC9 1341 aa7.23□□□□□ -1.25
Lin28b-201ENSMUST00000079390 Lamc3Q9R0B6 1581 aa7.23□□□□□ -1.25
Lin28b-201ENSMUST00000079390 LrpprcQ6PB66 1392 aaKnown RBP7.23□□□□□ -1.25
Lin28b-201ENSMUST00000079390 Cep162Q6ZQ06 1403 aa7.23□□□□□ -1.25
Lin28b-201ENSMUST00000079390 PtprkP35822 1457 aa7.22□□□□□ -1.25
Lin28b-201ENSMUST00000079390 Dhx29Q6PGC1 1365 aaKnown RBP7.2□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Unc13aQ4KUS2 1712 aa7.2□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Fam135aQ6NS59 1506 aa7.2□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Clip1Q922J3 1391 aa7.19□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Camsap1A2AHC3 1581 aa7.18□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Mrc2Q64449 1479 aa7.18□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Acin1Q9JIX8 1338 aaKnown RBP7.18□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Lmod2Q3UHZ5 550 aa7.18□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Grin2bQ01097 1482 aa7.16□□□□□ -1.26
Lin28b-201ENSMUST00000079390 TnnQ80Z71 1560 aa7.16□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Baz1bQ9Z277 1479 aa7.16□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Duox2A2AQ99 1517 aa7.15□□□□□ -1.26
Lin28b-201ENSMUST00000079390 Setd5Q5XJV7 1441 aa7.15□□□□□ -1.27
Lin28b-201ENSMUST00000079390 PogzQ8BZH4 1409 aaKnown RBP7.14□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Shroom4Q1W617 1475 aa7.13□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Efcab5A0JP43 1406 aa7.13□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Mier1Q5UAK0 511 aa7.13□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Rad54l2Q99NG0 1466 aa7.12□□□□□ -1.27
Lin28b-201ENSMUST00000079390 NrkQ9R0G8 1455 aa7.12□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Arhgap35Q91YM2 1499 aa7.12□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Plb1Q3TTY0 1478 aa7.1□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Eea1Q8BL66 1411 aa7.1□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Fkbp15Q6P9Q6 1216 aaKnown RBP7.09□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Urb2E9Q7L1 1524 aaKnown RBP7.09□□□□□ -1.27
Lin28b-201ENSMUST00000079390 Arhgap27A2AB59 869 aa7.08□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Mroh2bQ7M6Y6 1581 aa7.07□□□□□ -1.28
Lin28b-201ENSMUST00000079390 BlmO88700 1416 aa7.07□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Fam50aQ9WV03 339 aaKnown RBP7.06□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Kif21aQ9QXL2 1672 aa7.06□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Carmil1Q6EDY6 1374 aa7.05□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Aebp1Q640N1 1128 aa7.05□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Crocc2F6XLV1 1638 aa7.04□□□□□ -1.28
Lin28b-201ENSMUST00000079390 Ube2uB1AUC4 352 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms