RNA–Protein interactions for RNA: ENSMUST00000057228.1

Pcdhb9-201, Transcript of Protocadherin beta 9, mousemouse

APPRIS P1 BASIC

Gene Pcdhb9, Length 3,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9-201ENSMUST00000057228 NischQ80TM9 1593 aa21.82■■□□□ 1.08
Pcdhb9-201ENSMUST00000057228 Gm35339A0A140LHH9 1649 aa21.6■■□□□ 1.05
Pcdhb9-201ENSMUST00000057228 Abcc9P70170 1546 aa21.14■□□□□ 0.97
Pcdhb9-201ENSMUST00000057228 Abcc8B2RUS7 1588 aa20.86■□□□□ 0.93
Pcdhb9-201ENSMUST00000057228 Rhox8Q6VSS7 320 aa19.84■□□□□ 0.77
Pcdhb9-201ENSMUST00000057228 ScribQ80U72 1612 aa19.77■□□□□ 0.76
Pcdhb9-201ENSMUST00000057228 Kdm5dQ62240 1548 aa19.25■□□□□ 0.67
Pcdhb9-201ENSMUST00000057228 Dcaf1Q80TR8 1506 aa19.18■□□□□ 0.66
Pcdhb9-201ENSMUST00000057228 Rb1cc1Q9ESK9 1588 aa19.09■□□□□ 0.65
Pcdhb9-201ENSMUST00000057228 NacadQ5SWP3 1504 aa19.06■□□□□ 0.64
Pcdhb9-201ENSMUST00000057228 Baz1aO88379 1555 aa18.8■□□□□ 0.6
Pcdhb9-201ENSMUST00000057228 Rtl1Q7M732 1744 aa18.78■□□□□ 0.6
Pcdhb9-201ENSMUST00000057228 Sycp2Q9CUU3 1500 aa18.71■□□□□ 0.59
Pcdhb9-201ENSMUST00000057228 Ccdc180J3QNE4 1664 aa18.64■□□□□ 0.58
Pcdhb9-201ENSMUST00000057228 Zcchc6Q5BLK4 1491 aaKnown RBP18.57■□□□□ 0.56
Pcdhb9-201ENSMUST00000057228 Ccdc136Q3TVA9 1136 aa18.54■□□□□ 0.56
Pcdhb9-201ENSMUST00000057228 BicraF8VPZ9 1578 aa18.45■□□□□ 0.54
Pcdhb9-201ENSMUST00000057228 Crybg2B7ZCC2 1516 aa18.42■□□□□ 0.54
Pcdhb9-201ENSMUST00000057228 Smarca2Q6DIC0 1577 aa18.36■□□□□ 0.53
Pcdhb9-201ENSMUST00000057228 Cecr2E9Q2Z1 1453 aa18.19■□□□□ 0.5
Pcdhb9-201ENSMUST00000057228 Trim41Q5NCC3 630 aa17.94■□□□□ 0.46
Pcdhb9-201ENSMUST00000057228 Synj1Q8CHC4 1574 aa17.88■□□□□ 0.45
Pcdhb9-201ENSMUST00000057228 Brd4Q9ESU6 1400 aaKnown RBP17.81■□□□□ 0.44
Pcdhb9-201ENSMUST00000057228 Smarca4Q3TKT4 1613 aaKnown RBP17.78■□□□□ 0.44
Pcdhb9-201ENSMUST00000057228 CftrP26361 1476 aa17.76■□□□□ 0.43
Pcdhb9-201ENSMUST00000057228 Cngb1E1AZ71 1325 aa17.7■□□□□ 0.42
Pcdhb9-201ENSMUST00000057228 Rpgrip1Q9EPQ2 1331 aa17.7■□□□□ 0.42
Pcdhb9-201ENSMUST00000057228 HrcG5E8J6 738 aa17.65■□□□□ 0.42
Pcdhb9-201ENSMUST00000057228 Cttnbp2B9EJA2 1648 aa17.64■□□□□ 0.41
Pcdhb9-201ENSMUST00000057228 Esf1Q3V1V3 845 aaKnown RBP17.63■□□□□ 0.41
Pcdhb9-201ENSMUST00000057228 Iqgap2Q3UQ44 1575 aa17.63■□□□□ 0.41
Pcdhb9-201ENSMUST00000057228 Atad2bE9Q166 1460 aaKnown RBP17.59■□□□□ 0.41
Pcdhb9-201ENSMUST00000057228 Pds5bQ4VA53 1446 aaKnown RBP17.56■□□□□ 0.4
Pcdhb9-201ENSMUST00000057228 Chic1Q8CBW7 227 aa17.54■□□□□ 0.4
Pcdhb9-201ENSMUST00000057228 Golga3P55937 1487 aa17.54■□□□□ 0.4
Pcdhb9-201ENSMUST00000057228 Rsf1E9PWW9 1441 aaKnown RBP17.49■□□□□ 0.39
Pcdhb9-201ENSMUST00000057228 Ccdc88bQ4QRL3 1481 aa17.48■□□□□ 0.39
Pcdhb9-201ENSMUST00000057228 Top2bQ64511 1612 aa17.42■□□□□ 0.38
Pcdhb9-201ENSMUST00000057228 Frmpd1A2AKB4 1549 aa17.38■□□□□ 0.37
Pcdhb9-201ENSMUST00000057228 Cc2d2aQ8CFW7 1633 aa17.38■□□□□ 0.37
Pcdhb9-201ENSMUST00000057228 Cep164Q5DU05 1446 aa17.34■□□□□ 0.37
Pcdhb9-201ENSMUST00000057228 Wdr62Q3U3T8 1523 aa17.33■□□□□ 0.36
Pcdhb9-201ENSMUST00000057228 Gab3Q8BSM5 595 aa17.32■□□□□ 0.36
Pcdhb9-201ENSMUST00000057228 Ercc6F8VPZ5 1481 aa17.24■□□□□ 0.35
Pcdhb9-201ENSMUST00000057228 Unc13aQ4KUS2 1712 aa17.23■□□□□ 0.35
Pcdhb9-201ENSMUST00000057228 Ehmt2Q9Z148 1263 aaKnown RBP17.21■□□□□ 0.35
Pcdhb9-201ENSMUST00000057228 Thoc2B1AZI6 1594 aaKnown RBP17.21■□□□□ 0.35
Pcdhb9-201ENSMUST00000057228 Dnajc5bQ9CQ94 199 aa17.15■□□□□ 0.34
Pcdhb9-201ENSMUST00000057228 Fmn1Q05860 1466 aa17.13■□□□□ 0.33
Pcdhb9-201ENSMUST00000057228 Kif15Q6P9L6 1387 aa17.03■□□□□ 0.32
Pcdhb9-201ENSMUST00000057228 TnnQ80Z71 1560 aa17.02■□□□□ 0.32
Pcdhb9-201ENSMUST00000057228 Top2aQ01320 1528 aaKnown RBP17.02■□□□□ 0.31
Pcdhb9-201ENSMUST00000057228 Il27Q8K3I6 234 aa17.01■□□□□ 0.31
Pcdhb9-201ENSMUST00000057228 Phldb1Q6PDH0 1371 aaKnown RBP16.99■□□□□ 0.31
Pcdhb9-201ENSMUST00000057228 Lamc3Q9R0B6 1581 aa16.99■□□□□ 0.31
Pcdhb9-201ENSMUST00000057228 Ubl4bQ9CQ84 188 aa16.97■□□□□ 0.31
Pcdhb9-201ENSMUST00000057228 Fam135aQ6NS59 1506 aa16.92■□□□□ 0.3
Pcdhb9-201ENSMUST00000057228 Rapgef2Q8CHG7 1496 aa16.85■□□□□ 0.29
Pcdhb9-201ENSMUST00000057228 Cux2P70298 1426 aa16.84■□□□□ 0.29
Pcdhb9-201ENSMUST00000057228 Camsap1A2AHC3 1581 aa16.84■□□□□ 0.29
Pcdhb9-201ENSMUST00000057228 PtprkP35822 1457 aa16.83■□□□□ 0.28
Pcdhb9-201ENSMUST00000057228 Acin1Q9JIX8 1338 aaKnown RBP16.81■□□□□ 0.28
Pcdhb9-201ENSMUST00000057228 Npm2Q80W85 207 aa16.78■□□□□ 0.28
Pcdhb9-201ENSMUST00000057228 Myt1lP97500 1187 aa16.78■□□□□ 0.28
Pcdhb9-201ENSMUST00000057228 Cep162Q6ZQ06 1403 aa16.74■□□□□ 0.27
Pcdhb9-201ENSMUST00000057228 Ccdc18Q640L5 1455 aa16.72■□□□□ 0.27
Pcdhb9-201ENSMUST00000057228 Npm1Q61937 292 aaKnown RBP16.71■□□□□ 0.26
Pcdhb9-201ENSMUST00000057228 Grin2bQ01097 1482 aa16.68■□□□□ 0.26
Pcdhb9-201ENSMUST00000057228 Pcgf6Q99NA9 353 aa16.66■□□□□ 0.26
Pcdhb9-201ENSMUST00000057228 Eif4g1Q6NZJ6 1600 aaKnown RBP16.65■□□□□ 0.26
Pcdhb9-201ENSMUST00000057228 Shroom4Q1W617 1475 aa16.62■□□□□ 0.25
Pcdhb9-201ENSMUST00000057228 Arhgap35Q91YM2 1499 aa16.62■□□□□ 0.25
Pcdhb9-201ENSMUST00000057228 NrkQ9R0G8 1455 aa16.6■□□□□ 0.25
Pcdhb9-201ENSMUST00000057228 LrpprcQ6PB66 1392 aaKnown RBP16.59■□□□□ 0.25
Pcdhb9-201ENSMUST00000057228 Mrc2Q64449 1479 aa16.59■□□□□ 0.25
Pcdhb9-201ENSMUST00000057228 Kif21aQ9QXL2 1672 aa16.57■□□□□ 0.24
Pcdhb9-201ENSMUST00000057228 Zeb1Q64318 1117 aa16.54■□□□□ 0.24
Pcdhb9-201ENSMUST00000057228 PogzQ8BZH4 1409 aaKnown RBP16.54■□□□□ 0.24
Pcdhb9-201ENSMUST00000057228 Duox2A2AQ99 1517 aa16.54■□□□□ 0.24
Pcdhb9-201ENSMUST00000057228 Dhx29Q6PGC1 1365 aaKnown RBP16.53■□□□□ 0.24
Pcdhb9-201ENSMUST00000057228 Baz1bQ9Z277 1479 aa16.51■□□□□ 0.23
Pcdhb9-201ENSMUST00000057228 Samd9lQ69Z37 1561 aa16.47■□□□□ 0.23
Pcdhb9-201ENSMUST00000057228 Mroh2bQ7M6Y6 1581 aa16.46■□□□□ 0.23
Pcdhb9-201ENSMUST00000057228 Efcab5A0JP43 1406 aa16.44■□□□□ 0.22
Pcdhb9-201ENSMUST00000057228 Ap3b1Q9Z1T1 1105 aa16.44■□□□□ 0.22
Pcdhb9-201ENSMUST00000057228 Rad54l2Q99NG0 1466 aa16.43■□□□□ 0.22
Pcdhb9-201ENSMUST00000057228 Crocc2F6XLV1 1638 aa16.41■□□□□ 0.22
Pcdhb9-201ENSMUST00000057228 Clip1Q922J3 1391 aa16.41■□□□□ 0.22
Pcdhb9-201ENSMUST00000057228 Plekhg3Q4VAC9 1341 aa16.39■□□□□ 0.22
Pcdhb9-201ENSMUST00000057228 Plb1Q3TTY0 1478 aa16.37■□□□□ 0.21
Pcdhb9-201ENSMUST00000057228 Map3k1P53349 1493 aa16.37■□□□□ 0.21
Pcdhb9-201ENSMUST00000057228 UbtfP25976 765 aaKnown RBP16.37■□□□□ 0.21
Pcdhb9-201ENSMUST00000057228 Arap1Q4LDD4 1452 aa16.34■□□□□ 0.21
Pcdhb9-201ENSMUST00000057228 Urb2E9Q7L1 1524 aaKnown RBP16.33■□□□□ 0.2
Pcdhb9-201ENSMUST00000057228 Setd5Q5XJV7 1441 aa16.31■□□□□ 0.2
Pcdhb9-201ENSMUST00000057228 SynmQ70IV5 1561 aa16.31■□□□□ 0.2
Pcdhb9-201ENSMUST00000057228 Cux1P53564 1515 aa16.3■□□□□ 0.2
Pcdhb9-201ENSMUST00000057228 Myt1Q8CFC2 1127 aa16.29■□□□□ 0.2
Pcdhb9-201ENSMUST00000057228 Ankrd26Q811D2 1581 aa16.29■□□□□ 0.2
Pcdhb9-201ENSMUST00000057228 Eea1Q8BL66 1411 aa16.28■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms