RNA–Protein interactions for RNA: ENSMUST00000051408.7

Clrn1-201, Transcript of Clarin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-201ENSMUST00000051408 Chic1Q8CBW7 227 aa33.08■■■□□ 2.89
Clrn1-201ENSMUST00000051408 Mapk8ip2Q9ERE9 830 aa32.18■■■□□ 2.74
Clrn1-201ENSMUST00000051408 Phf23Q8BSN5 401 aa29.7■■■□□ 2.35
Clrn1-201ENSMUST00000051408 Plppr3Q7TPB0 716 aa28.74■■■□□ 2.19
Clrn1-201ENSMUST00000051408 Gab3Q8BSM5 595 aa28.5■■■□□ 2.15
Clrn1-201ENSMUST00000051408 Senp3Q9EP97 568 aaKnown RBP27.26■■□□□ 1.95
Clrn1-201ENSMUST00000051408 Kcna4Q61423 654 aa26.23■■□□□ 1.79
Clrn1-201ENSMUST00000051408 Trap1aP19473 224 aa24.12■■□□□ 1.45
Clrn1-201ENSMUST00000051408 Hoxd11P23813 323 aa24.02■■□□□ 1.44
Clrn1-201ENSMUST00000051408 Fam163aQ8CAA5 168 aa23.87■■□□□ 1.41
Clrn1-201ENSMUST00000051408 Gm35339A0A140LHH9 1649 aa23.67■■□□□ 1.38
Clrn1-201ENSMUST00000051408 Dmrt2Q8BG36 561 aa23.43■■□□□ 1.34
Clrn1-201ENSMUST00000051408 NischQ80TM9 1593 aa23.23■■□□□ 1.31
Clrn1-201ENSMUST00000051408 Znf219Q6IQX8 726 aa23.11■■□□□ 1.29
Clrn1-201ENSMUST00000051408 Ppargc1bQ8VHJ7 1014 aa23.02■■□□□ 1.28
Clrn1-201ENSMUST00000051408 Chrna2Q91X60 512 aa22.84■■□□□ 1.25
Clrn1-201ENSMUST00000051408 Abcc9P70170 1546 aa22.82■■□□□ 1.24
Clrn1-201ENSMUST00000051408 Rsph4aQ8BYM7 716 aa22.64■■□□□ 1.21
Clrn1-201ENSMUST00000051408 Abcc8B2RUS7 1588 aa22.63■■□□□ 1.21
Clrn1-201ENSMUST00000051408 Slc4a1apE9PX68 744 aa22.51■■□□□ 1.19
Clrn1-201ENSMUST00000051408 Rimbp2Q80U40 1072 aa22.32■■□□□ 1.16
Clrn1-201ENSMUST00000051408 Atf5O70191 283 aa22.23■■□□□ 1.15
Clrn1-201ENSMUST00000051408 Dnajc5bQ9CQ94 199 aa22.22■■□□□ 1.15
Clrn1-201ENSMUST00000051408 ScribQ80U72 1612 aa22.13■■□□□ 1.13
Clrn1-201ENSMUST00000051408 ArsiQ32KI9 573 aa22.1■■□□□ 1.13
Clrn1-201ENSMUST00000051408 Ppp4r2Q0VGB7 417 aa22.05■■□□□ 1.12
Clrn1-201ENSMUST00000051408 Hs6st3Q9QYK4 470 aa22.02■■□□□ 1.12
Clrn1-201ENSMUST00000051408 Akt1s1Q9D1F4 257 aa21.84■■□□□ 1.09
Clrn1-201ENSMUST00000051408 1700123L14RikQ3V2K7 440 aa21.49■■□□□ 1.03
Clrn1-201ENSMUST00000051408 Slc34a2Q9DBP0 697 aa21.41■■□□□ 1.02
Clrn1-201ENSMUST00000051408 NacadQ5SWP3 1504 aa21.34■■□□□ 1.01
Clrn1-201ENSMUST00000051408 Kdm5dQ62240 1548 aa21.29■■□□□ 1
Clrn1-201ENSMUST00000051408 Bach1P97302 739 aa21.23■□□□□ 0.99
Clrn1-201ENSMUST00000051408 Sox12Q04890 314 aa21.01■□□□□ 0.95
Clrn1-201ENSMUST00000051408 Sycp2Q9CUU3 1500 aa20.97■□□□□ 0.95
Clrn1-201ENSMUST00000051408 BicraF8VPZ9 1578 aa20.79■□□□□ 0.92
Clrn1-201ENSMUST00000051408 WdpcpQ8C456 722 aa20.69■□□□□ 0.9
Clrn1-201ENSMUST00000051408 Dcaf1Q80TR8 1506 aa20.64■□□□□ 0.9
Clrn1-201ENSMUST00000051408 Fam71e1A1L3C1 212 aa20.62■□□□□ 0.89
Clrn1-201ENSMUST00000051408 Cdca7Q9D0M2 382 aa20.47■□□□□ 0.87
Clrn1-201ENSMUST00000051408 Nlrp6Q91WS2 869 aa20.45■□□□□ 0.86
Clrn1-201ENSMUST00000051408 C1qtnf12Q8R2Z0 308 aa20.38■□□□□ 0.85
Clrn1-201ENSMUST00000051408 Ube2uB1AUC4 352 aa20.33■□□□□ 0.85
Clrn1-201ENSMUST00000051408 Thoc2B1AZI6 1594 aaKnown RBP20.3■□□□□ 0.84
Clrn1-201ENSMUST00000051408 Pds5bQ4VA53 1446 aaKnown RBP20.29■□□□□ 0.84
Clrn1-201ENSMUST00000051408 Rb1cc1Q9ESK9 1588 aa20.21■□□□□ 0.83
Clrn1-201ENSMUST00000051408 AcrbpQ3V140 540 aa20.1■□□□□ 0.81
Clrn1-201ENSMUST00000051408 Ifnlr1Q8CGK5 535 aa20.07■□□□□ 0.8
Clrn1-201ENSMUST00000051408 G430095P16RikE9Q913 147 aa20.02■□□□□ 0.8
Clrn1-201ENSMUST00000051408 Atad2bE9Q166 1460 aaKnown RBP20■□□□□ 0.79
Clrn1-201ENSMUST00000051408 Cc2d2aQ8CFW7 1633 aa20■□□□□ 0.79
Clrn1-201ENSMUST00000051408 Pde4cQ3UEI1 686 aa19.98■□□□□ 0.79
Clrn1-201ENSMUST00000051408 Riok3Q9DBU3 519 aaKnown RBP19.97■□□□□ 0.79
Clrn1-201ENSMUST00000051408 Egfem1Q8C088 590 aa19.95■□□□□ 0.78
Clrn1-201ENSMUST00000051408 Npm2Q80W85 207 aa19.92■□□□□ 0.78
Clrn1-201ENSMUST00000051408 Zbtb7aO88939 569 aaKnown RBP19.91■□□□□ 0.78
Clrn1-201ENSMUST00000051408 Grwd1Q810D6 446 aaKnown RBP19.86■□□□□ 0.77
Clrn1-201ENSMUST00000051408 Ercc6F8VPZ5 1481 aa19.86■□□□□ 0.77
Clrn1-201ENSMUST00000051408 Baz1aO88379 1555 aa19.85■□□□□ 0.77
Clrn1-201ENSMUST00000051408 Znf704Q9ERQ3 566 aa19.84■□□□□ 0.77
Clrn1-201ENSMUST00000051408 Ms4a5Q810P8 197 aa19.81■□□□□ 0.76
Clrn1-201ENSMUST00000051408 Crybg2B7ZCC2 1516 aa19.81■□□□□ 0.76
Clrn1-201ENSMUST00000051408 MyclP10166 368 aa19.8■□□□□ 0.76
Clrn1-201ENSMUST00000051408 Trim41Q5NCC3 630 aa19.77■□□□□ 0.76
Clrn1-201ENSMUST00000051408 Zcchc6Q5BLK4 1491 aaKnown RBP19.76■□□□□ 0.75
Clrn1-201ENSMUST00000051408 Slc4a5E9Q3M5 1116 aa19.75■□□□□ 0.75
Clrn1-201ENSMUST00000051408 Fam135aQ6NS59 1506 aa19.74■□□□□ 0.75
Clrn1-201ENSMUST00000051408 Prm3Q62100 101 aa19.73■□□□□ 0.75
Clrn1-201ENSMUST00000051408 Smarca2Q6DIC0 1577 aa19.71■□□□□ 0.75
Clrn1-201ENSMUST00000051408 Rhox8Q6VSS7 320 aa19.7■□□□□ 0.74
Clrn1-201ENSMUST00000051408 Zbtb12Q9Z150 459 aa19.64■□□□□ 0.73
Clrn1-201ENSMUST00000051408 Ccdc180J3QNE4 1664 aa19.62■□□□□ 0.73
Clrn1-201ENSMUST00000051408 Dnajc5P60904 198 aa19.61■□□□□ 0.73
Clrn1-201ENSMUST00000051408 Smarca4Q3TKT4 1613 aaKnown RBP19.61■□□□□ 0.73
Clrn1-201ENSMUST00000051408 Iqgap2Q3UQ44 1575 aa19.6■□□□□ 0.73
Clrn1-201ENSMUST00000051408 Rtn4Q99P72 1162 aaKnown RBP19.57■□□□□ 0.72
Clrn1-201ENSMUST00000051408 Rnf216P58283 853 aa19.55■□□□□ 0.72
Clrn1-201ENSMUST00000051408 Abcb7Q61102 752 aaKnown RBP19.53■□□□□ 0.72
Clrn1-201ENSMUST00000051408 Phldb1Q6PDH0 1371 aaKnown RBP19.53■□□□□ 0.72
Clrn1-201ENSMUST00000051408 Frmpd1A2AKB4 1549 aa19.51■□□□□ 0.71
Clrn1-201ENSMUST00000051408 Wdr62Q3U3T8 1523 aa19.5■□□□□ 0.71
Clrn1-201ENSMUST00000051408 Cecr2E9Q2Z1 1453 aa19.48■□□□□ 0.71
Clrn1-201ENSMUST00000051408 Ubl4bQ9CQ84 188 aa19.45■□□□□ 0.7
Clrn1-201ENSMUST00000051408 Styxl1Q9DAR2 321 aa19.42■□□□□ 0.7
Clrn1-201ENSMUST00000051408 Gtpbp6Q3U6U5 514 aa19.41■□□□□ 0.7
Clrn1-201ENSMUST00000051408 Tshz2Q68FE9 1030 aa19.39■□□□□ 0.69
Clrn1-201ENSMUST00000051408 Baz1bQ9Z277 1479 aa19.38■□□□□ 0.69
Clrn1-201ENSMUST00000051408 Mrc2Q64449 1479 aa19.3■□□□□ 0.68
Clrn1-201ENSMUST00000051408 Nkx1-1G3UXB3 402 aa19.23■□□□□ 0.67
Clrn1-201ENSMUST00000051408 Unc13aQ4KUS2 1712 aa19.17■□□□□ 0.66
Clrn1-201ENSMUST00000051408 Fbln2P37889 1221 aa19.1■□□□□ 0.65
Clrn1-201ENSMUST00000051408 GapdhsQ64467 440 aa19■□□□□ 0.63
Clrn1-201ENSMUST00000051408 MpndQ3TV65 487 aa18.95■□□□□ 0.62
Clrn1-201ENSMUST00000051408 Npm3Q9CPP0 175 aaKnown RBP18.95■□□□□ 0.62
Clrn1-201ENSMUST00000051408 Lrriq1Q0P5X1 1673 aa18.91■□□□□ 0.62
Clrn1-201ENSMUST00000051408 CftrP26361 1476 aa18.9■□□□□ 0.62
Clrn1-201ENSMUST00000051408 Rsf1E9PWW9 1441 aaKnown RBP18.85■□□□□ 0.61
Clrn1-201ENSMUST00000051408 Cttnbp2B9EJA2 1648 aa18.82■□□□□ 0.6
Clrn1-201ENSMUST00000051408 Synj1Q8CHC4 1574 aa18.81■□□□□ 0.6
Clrn1-201ENSMUST00000051408 Cux2P70298 1426 aa18.78■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms