RNA–Protein interactions for RNA: ENSMUST00000039008.9

E330009J07Rik-201, mousemouse

TSL 1 (best) BASIC

Gene E330009J07Rik, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E330009J07Rik-201ENSMUST00000039008 NischQ80TM9 1593 aa45,59■■■■■ 4,89
E330009J07Rik-201ENSMUST00000039008 Gm35339A0A140LHH9 1649 aa45,43■■■■■ 4,86
E330009J07Rik-201ENSMUST00000039008 Abcc9P70170 1546 aa44,28■■■■■ 4,68
E330009J07Rik-201ENSMUST00000039008 Abcc8B2RUS7 1588 aa43,56■■■■■ 4,56
E330009J07Rik-201ENSMUST00000039008 Rhox8Q6VSS7 320 aa41,1■■■■■ 4,17
E330009J07Rik-201ENSMUST00000039008 ScribQ80U72 1612 aa40,94■■■■■ 4,14
E330009J07Rik-201ENSMUST00000039008 Dcaf1Q80TR8 1506 aa40,71■■■■■ 4,11
E330009J07Rik-201ENSMUST00000039008 Rtl1Q7M732 1744 aa40,25■■■■■ 4,03
E330009J07Rik-201ENSMUST00000039008 Kdm5dQ62240 1548 aa40,03■■■■■ 4
E330009J07Rik-201ENSMUST00000039008 NacadQ5SWP3 1504 aa39,95■■■■□ 3,99
E330009J07Rik-201ENSMUST00000039008 Rb1cc1Q9ESK9 1588 aa39,86■■■■□ 3,97
E330009J07Rik-201ENSMUST00000039008 Ccdc180J3QNE4 1664 aa39,74■■■■□ 3,95
E330009J07Rik-201ENSMUST00000039008 Baz1aO88379 1555 aa39,45■■■■□ 3,91
E330009J07Rik-201ENSMUST00000039008 Crybg2B7ZCC2 1516 aa39,12■■■■□ 3,85
E330009J07Rik-201ENSMUST00000039008 Sycp2Q9CUU3 1500 aa39,07■■■■□ 3,85
E330009J07Rik-201ENSMUST00000039008 Zcchc6Q5BLK4 1491 aaKnown RBP38,81■■■■□ 3,8
E330009J07Rik-201ENSMUST00000039008 Smarca2Q6DIC0 1577 aa38,47■■■■□ 3,75
E330009J07Rik-201ENSMUST00000039008 BicraF8VPZ9 1578 aa38,21■■■■□ 3,71
E330009J07Rik-201ENSMUST00000039008 Ccdc136Q3TVA9 1136 aa38,16■■■■□ 3,7
E330009J07Rik-201ENSMUST00000039008 Trim41Q5NCC3 630 aa37,78■■■■□ 3,64
E330009J07Rik-201ENSMUST00000039008 Cecr2E9Q2Z1 1453 aa37,59■■■■□ 3,61
E330009J07Rik-201ENSMUST00000039008 Brd4Q9ESU6 1400 aaKnown RBP37,54■■■■□ 3,6
E330009J07Rik-201ENSMUST00000039008 HrcG5E8J6 738 aa37,5■■■■□ 3,59
E330009J07Rik-201ENSMUST00000039008 Smarca4Q3TKT4 1613 aaKnown RBP37,21■■■■□ 3,55
E330009J07Rik-201ENSMUST00000039008 Synj1Q8CHC4 1574 aa37,17■■■■□ 3,54
E330009J07Rik-201ENSMUST00000039008 CftrP26361 1476 aa37,1■■■■□ 3,53
E330009J07Rik-201ENSMUST00000039008 Cttnbp2B9EJA2 1648 aa37,03■■■■□ 3,52
E330009J07Rik-201ENSMUST00000039008 Pds5bQ4VA53 1446 aaKnown RBP36,85■■■■□ 3,49
E330009J07Rik-201ENSMUST00000039008 Atad2bE9Q166 1460 aaKnown RBP36,85■■■■□ 3,49
E330009J07Rik-201ENSMUST00000039008 Golga3P55937 1487 aa36,82■■■■□ 3,48
E330009J07Rik-201ENSMUST00000039008 Iqgap2Q3UQ44 1575 aa36,75■■■■□ 3,47
E330009J07Rik-201ENSMUST00000039008 Cngb1E1AZ71 1325 aa36,62■■■■□ 3,45
E330009J07Rik-201ENSMUST00000039008 Esf1Q3V1V3 845 aaKnown RBP36,61■■■■□ 3,45
E330009J07Rik-201ENSMUST00000039008 Cep164Q5DU05 1446 aa36,61■■■■□ 3,45
E330009J07Rik-201ENSMUST00000039008 Top2bQ64511 1612 aa36,54■■■■□ 3,44
E330009J07Rik-201ENSMUST00000039008 Rsf1E9PWW9 1441 aaKnown RBP36,35■■■■□ 3,41
E330009J07Rik-201ENSMUST00000039008 Ccdc88bQ4QRL3 1481 aa36,22■■■■□ 3,39
E330009J07Rik-201ENSMUST00000039008 Chic1Q8CBW7 227 aa36,2■■■■□ 3,39
E330009J07Rik-201ENSMUST00000039008 Wdr62Q3U3T8 1523 aa36,16■■■■□ 3,38
E330009J07Rik-201ENSMUST00000039008 Frmpd1A2AKB4 1549 aa36,12■■■■□ 3,37
E330009J07Rik-201ENSMUST00000039008 Ercc6F8VPZ5 1481 aa36,1■■■■□ 3,37
E330009J07Rik-201ENSMUST00000039008 Fmn1Q05860 1466 aa36,06■■■■□ 3,36
E330009J07Rik-201ENSMUST00000039008 Cc2d2aQ8CFW7 1633 aa36,06■■■■□ 3,36
E330009J07Rik-201ENSMUST00000039008 Thoc2B1AZI6 1594 aaKnown RBP35,82■■■■□ 3,32
E330009J07Rik-201ENSMUST00000039008 TnnQ80Z71 1560 aa35,74■■■■□ 3,31
E330009J07Rik-201ENSMUST00000039008 Top2aQ01320 1528 aaKnown RBP35,71■■■■□ 3,31
E330009J07Rik-201ENSMUST00000039008 Unc13aQ4KUS2 1712 aa35,68■■■■□ 3,3
E330009J07Rik-201ENSMUST00000039008 Lamc3Q9R0B6 1581 aa35,63■■■■□ 3,3
E330009J07Rik-201ENSMUST00000039008 Gab3Q8BSM5 595 aa35,62■■■■□ 3,29
E330009J07Rik-201ENSMUST00000039008 Phldb1Q6PDH0 1371 aaKnown RBP35,55■■■■□ 3,28
E330009J07Rik-201ENSMUST00000039008 Kif15Q6P9L6 1387 aa35,41■■■■□ 3,26
E330009J07Rik-201ENSMUST00000039008 Fam135aQ6NS59 1506 aa35,39■■■■□ 3,26
E330009J07Rik-201ENSMUST00000039008 Rapgef2Q8CHG7 1496 aa35,37■■■■□ 3,25
E330009J07Rik-201ENSMUST00000039008 Dnajc5bQ9CQ94 199 aa35,37■■■■□ 3,25
E330009J07Rik-201ENSMUST00000039008 Rpgrip1Q9EPQ2 1331 aa35,19■■■■□ 3,22
E330009J07Rik-201ENSMUST00000039008 Camsap1A2AHC3 1581 aa35,17■■■■□ 3,22
E330009J07Rik-201ENSMUST00000039008 Ubl4bQ9CQ84 188 aa35,16■■■■□ 3,22
E330009J07Rik-201ENSMUST00000039008 Ccdc18Q640L5 1455 aa35,12■■■■□ 3,21
E330009J07Rik-201ENSMUST00000039008 Ehmt2Q9Z148 1263 aaKnown RBP35,1■■■■□ 3,21
E330009J07Rik-201ENSMUST00000039008 Baz1bQ9Z277 1479 aa35,1■■■■□ 3,21
E330009J07Rik-201ENSMUST00000039008 Cep162Q6ZQ06 1403 aa35,06■■■■□ 3,2
E330009J07Rik-201ENSMUST00000039008 Cux2P70298 1426 aa35■■■■□ 3,19
E330009J07Rik-201ENSMUST00000039008 Acin1Q9JIX8 1338 aaKnown RBP35■■■■□ 3,19
E330009J07Rik-201ENSMUST00000039008 NrkQ9R0G8 1455 aa34,98■■■■□ 3,19
E330009J07Rik-201ENSMUST00000039008 Eif4g1Q6NZJ6 1600 aaKnown RBP34,93■■■■□ 3,18
E330009J07Rik-201ENSMUST00000039008 Npm2Q80W85 207 aa34,93■■■■□ 3,18
E330009J07Rik-201ENSMUST00000039008 Il27Q8K3I6 234 aa34,91■■■■□ 3,18
E330009J07Rik-201ENSMUST00000039008 Grin2bQ01097 1482 aa34,87■■■■□ 3,17
E330009J07Rik-201ENSMUST00000039008 Shroom4Q1W617 1475 aa34,86■■■■□ 3,17
E330009J07Rik-201ENSMUST00000039008 Npm1Q61937 292 aaKnown RBP34,81■■■■□ 3,16
E330009J07Rik-201ENSMUST00000039008 PtprkP35822 1457 aa34,79■■■■□ 3,16
E330009J07Rik-201ENSMUST00000039008 Arhgap35Q91YM2 1499 aa34,7■■■■□ 3,14
E330009J07Rik-201ENSMUST00000039008 LrpprcQ6PB66 1392 aaKnown RBP34,66■■■■□ 3,14
E330009J07Rik-201ENSMUST00000039008 Myt1lP97500 1187 aa34,63■■■■□ 3,13
E330009J07Rik-201ENSMUST00000039008 Map3k1P53349 1493 aa34,63■■■■□ 3,13
E330009J07Rik-201ENSMUST00000039008 Efcab5A0JP43 1406 aa34,61■■■■□ 3,13
E330009J07Rik-201ENSMUST00000039008 Mrc2Q64449 1479 aa34,58■■■■□ 3,13
E330009J07Rik-201ENSMUST00000039008 PogzQ8BZH4 1409 aaKnown RBP34,58■■■■□ 3,13
E330009J07Rik-201ENSMUST00000039008 Mroh2bQ7M6Y6 1581 aa34,49■■■■□ 3,11
E330009J07Rik-201ENSMUST00000039008 Duox2A2AQ99 1517 aa34,47■■■■□ 3,11
E330009J07Rik-201ENSMUST00000039008 Dhx29Q6PGC1 1365 aaKnown RBP34,39■■■■□ 3,1
E330009J07Rik-201ENSMUST00000039008 Clip1Q922J3 1391 aa34,37■■■■□ 3,09
E330009J07Rik-201ENSMUST00000039008 AqrQ8CFQ3 1481 aaKnown RBP34,36■■■■□ 3,09
E330009J07Rik-201ENSMUST00000039008 Zeb1Q64318 1117 aa34,31■■■■□ 3,08
E330009J07Rik-201ENSMUST00000039008 Kif21aQ9QXL2 1672 aa34,3■■■■□ 3,08
E330009J07Rik-201ENSMUST00000039008 Eea1Q8BL66 1411 aa34,27■■■■□ 3,08
E330009J07Rik-201ENSMUST00000039008 Crocc2F6XLV1 1638 aa34,25■■■■□ 3,07
E330009J07Rik-201ENSMUST00000039008 Carmil1Q6EDY6 1374 aa34,17■■■■□ 3,06
E330009J07Rik-201ENSMUST00000039008 Samd9lQ69Z37 1561 aa34,17■■■■□ 3,06
E330009J07Rik-201ENSMUST00000039008 SynmQ70IV5 1561 aa34,14■■■■□ 3,06
E330009J07Rik-201ENSMUST00000039008 Setd5Q5XJV7 1441 aa34,11■■■■□ 3,05
E330009J07Rik-201ENSMUST00000039008 Erich3F6QRE9 1637 aa34,05■■■■□ 3,04
E330009J07Rik-201ENSMUST00000039008 Arap1Q4LDD4 1452 aa34,04■■■■□ 3,04
E330009J07Rik-201ENSMUST00000039008 Ankrd26Q811D2 1581 aa34,01■■■■□ 3,03
E330009J07Rik-201ENSMUST00000039008 Arhgef5E9Q7D5 1581 aa34■■■■□ 3,03
E330009J07Rik-201ENSMUST00000039008 Polr1aO35134 1717 aaKnown RBP33,96■■■■□ 3,03
E330009J07Rik-201ENSMUST00000039008 Mier1Q5UAK0 511 aa33,93■■■■□ 3,02
E330009J07Rik-201ENSMUST00000039008 Rad54l2Q99NG0 1466 aa33,92■■■■□ 3,02
E330009J07Rik-201ENSMUST00000039008 UbtfP25976 765 aaKnown RBP33,92■■■■□ 3,02
E330009J07Rik-201ENSMUST00000039008 Plb1Q3TTY0 1478 aa33,91■■■■□ 3,02
Retrieved 100 of 22,080 RNA–protein pairs in 10,5 ms