RNA–Protein interactions for RNA: ENSMUST00000038369.10

Cipc-201, Transcript of CLOCK-interacting pacemaker, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cipc, Length 4,098 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cipc-201ENSMUST00000038369 NischQ80TM9 1593 aa19.13■□□□□ 0.65
Cipc-201ENSMUST00000038369 Rhox8Q6VSS7 320 aa18.67■□□□□ 0.58
Cipc-201ENSMUST00000038369 Abcc9P70170 1546 aa18.34■□□□□ 0.53
Cipc-201ENSMUST00000038369 Gm35339A0A140LHH9 1649 aa18.26■□□□□ 0.51
Cipc-201ENSMUST00000038369 Abcc8B2RUS7 1588 aa18.02■□□□□ 0.48
Cipc-201ENSMUST00000038369 Ccdc136Q3TVA9 1136 aa17.09■□□□□ 0.33
Cipc-201ENSMUST00000038369 Rtl1Q7M732 1744 aa17.03■□□□□ 0.32
Cipc-201ENSMUST00000038369 Ccdc180J3QNE4 1664 aa16.82■□□□□ 0.28
Cipc-201ENSMUST00000038369 Rb1cc1Q9ESK9 1588 aa16.77■□□□□ 0.28
Cipc-201ENSMUST00000038369 Trim41Q5NCC3 630 aa16.75■□□□□ 0.27
Cipc-201ENSMUST00000038369 Zcchc6Q5BLK4 1491 aaKnown RBP16.74■□□□□ 0.27
Cipc-201ENSMUST00000038369 Dcaf1Q80TR8 1506 aa16.71■□□□□ 0.26
Cipc-201ENSMUST00000038369 NacadQ5SWP3 1504 aa16.7■□□□□ 0.26
Cipc-201ENSMUST00000038369 ScribQ80U72 1612 aa16.68■□□□□ 0.26
Cipc-201ENSMUST00000038369 Kdm5dQ62240 1548 aa16.63■□□□□ 0.25
Cipc-201ENSMUST00000038369 Esf1Q3V1V3 845 aaKnown RBP16.55■□□□□ 0.24
Cipc-201ENSMUST00000038369 Cngb1E1AZ71 1325 aa16.54■□□□□ 0.24
Cipc-201ENSMUST00000038369 Baz1aO88379 1555 aa16.5■□□□□ 0.23
Cipc-201ENSMUST00000038369 HrcG5E8J6 738 aa16.34■□□□□ 0.21
Cipc-201ENSMUST00000038369 Ehmt2Q9Z148 1263 aaKnown RBP16.21■□□□□ 0.19
Cipc-201ENSMUST00000038369 Gab3Q8BSM5 595 aa16.2■□□□□ 0.18
Cipc-201ENSMUST00000038369 Sycp2Q9CUU3 1500 aa16.2■□□□□ 0.18
Cipc-201ENSMUST00000038369 Brd4Q9ESU6 1400 aaKnown RBP16.12■□□□□ 0.17
Cipc-201ENSMUST00000038369 Crybg2B7ZCC2 1516 aa16.1■□□□□ 0.17
Cipc-201ENSMUST00000038369 Rpgrip1Q9EPQ2 1331 aa16.01■□□□□ 0.15
Cipc-201ENSMUST00000038369 Smarca2Q6DIC0 1577 aa15.94■□□□□ 0.14
Cipc-201ENSMUST00000038369 Npm2Q80W85 207 aa15.91■□□□□ 0.14
Cipc-201ENSMUST00000038369 Myt1lP97500 1187 aa15.81■□□□□ 0.12
Cipc-201ENSMUST00000038369 Cep164Q5DU05 1446 aa15.78■□□□□ 0.12
Cipc-201ENSMUST00000038369 Cecr2E9Q2Z1 1453 aa15.77■□□□□ 0.12
Cipc-201ENSMUST00000038369 Zeb1Q64318 1117 aa15.77■□□□□ 0.11
Cipc-201ENSMUST00000038369 Il27Q8K3I6 234 aa15.76■□□□□ 0.11
Cipc-201ENSMUST00000038369 Chic1Q8CBW7 227 aa15.76■□□□□ 0.11
Cipc-201ENSMUST00000038369 Golga3P55937 1487 aa15.73■□□□□ 0.11
Cipc-201ENSMUST00000038369 Acin1Q9JIX8 1338 aaKnown RBP15.65■□□□□ 0.1
Cipc-201ENSMUST00000038369 CftrP26361 1476 aa15.62■□□□□ 0.09
Cipc-201ENSMUST00000038369 BicraF8VPZ9 1578 aa15.61■□□□□ 0.09
Cipc-201ENSMUST00000038369 Pds5bQ4VA53 1446 aaKnown RBP15.6■□□□□ 0.09
Cipc-201ENSMUST00000038369 Synj1Q8CHC4 1574 aa15.58■□□□□ 0.09
Cipc-201ENSMUST00000038369 Rsf1E9PWW9 1441 aaKnown RBP15.55■□□□□ 0.08
Cipc-201ENSMUST00000038369 Smarca4Q3TKT4 1613 aaKnown RBP15.55■□□□□ 0.08
Cipc-201ENSMUST00000038369 Ercc6F8VPZ5 1481 aa15.49■□□□□ 0.07
Cipc-201ENSMUST00000038369 Atad2bE9Q166 1460 aaKnown RBP15.48■□□□□ 0.07
Cipc-201ENSMUST00000038369 Cttnbp2B9EJA2 1648 aa15.46■□□□□ 0.07
Cipc-201ENSMUST00000038369 Ccdc88bQ4QRL3 1481 aa15.45■□□□□ 0.06
Cipc-201ENSMUST00000038369 Npm1Q61937 292 aaKnown RBP15.45■□□□□ 0.06
Cipc-201ENSMUST00000038369 UbtfP25976 765 aaKnown RBP15.44■□□□□ 0.06
Cipc-201ENSMUST00000038369 Ubl4bQ9CQ84 188 aa15.4■□□□□ 0.06
Cipc-201ENSMUST00000038369 Iqgap2Q3UQ44 1575 aa15.37■□□□□ 0.05
Cipc-201ENSMUST00000038369 Kif15Q6P9L6 1387 aa15.36■□□□□ 0.05
Cipc-201ENSMUST00000038369 Fmn1Q05860 1466 aa15.33■□□□□ 0.05
Cipc-201ENSMUST00000038369 Ap3b1Q9Z1T1 1105 aa15.27■□□□□ 0.04
Cipc-201ENSMUST00000038369 NefmP08553 848 aa15.26■□□□□ 0.03
Cipc-201ENSMUST00000038369 Las1lA2BE28 776 aaKnown RBP15.22■□□□□ 0.03
Cipc-201ENSMUST00000038369 Ccdc18Q640L5 1455 aa15.18■□□□□ 0.02
Cipc-201ENSMUST00000038369 Clip1Q922J3 1391 aa15.16■□□□□ 0.02
Cipc-201ENSMUST00000038369 Plekhg3Q4VAC9 1341 aa15.15■□□□□ 0.02
Cipc-201ENSMUST00000038369 Mier1Q5UAK0 511 aa15.13■□□□□ 0.01
Cipc-201ENSMUST00000038369 Phldb1Q6PDH0 1371 aaKnown RBP15.12■□□□□ 0.01
Cipc-201ENSMUST00000038369 Ube2uB1AUC4 352 aa15.12■□□□□ 0.01
Cipc-201ENSMUST00000038369 Cc2d2aQ8CFW7 1633 aa15.11■□□□□ 0.01
Cipc-201ENSMUST00000038369 Wdr66E9Q743 1299 aa15.09■□□□□ 0.01
Cipc-201ENSMUST00000038369 Top2bQ64511 1612 aa15.08■□□□□ 0
Cipc-201ENSMUST00000038369 Frmpd1A2AKB4 1549 aa15.07■□□□□ 0
Cipc-201ENSMUST00000038369 Cep162Q6ZQ06 1403 aa15.05■□□□□ 0
Cipc-201ENSMUST00000038369 Cux2P70298 1426 aa15.02■□□□□ -0
Cipc-201ENSMUST00000038369 Wdr62Q3U3T8 1523 aa15□□□□□ -0.01
Cipc-201ENSMUST00000038369 Lmod2Q3UHZ5 550 aa14.99□□□□□ -0.01
Cipc-201ENSMUST00000038369 Fam50aQ9WV03 339 aaKnown RBP14.98□□□□□ -0.01
Cipc-201ENSMUST00000038369 Rapgef2Q8CHG7 1496 aa14.97□□□□□ -0.01
Cipc-201ENSMUST00000038369 Setd5Q5XJV7 1441 aa14.97□□□□□ -0.01
Cipc-201ENSMUST00000038369 Top2aQ01320 1528 aaKnown RBP14.97□□□□□ -0.01
Cipc-201ENSMUST00000038369 Eea1Q8BL66 1411 aa14.92□□□□□ -0.02
Cipc-201ENSMUST00000038369 LrpprcQ6PB66 1392 aaKnown RBP14.84□□□□□ -0.03
Cipc-201ENSMUST00000038369 BlmO88700 1416 aa14.83□□□□□ -0.04
Cipc-201ENSMUST00000038369 Baz1bQ9Z277 1479 aa14.82□□□□□ -0.04
Cipc-201ENSMUST00000038369 Pcgf6Q99NA9 353 aa14.81□□□□□ -0.04
Cipc-201ENSMUST00000038369 Lamc3Q9R0B6 1581 aa14.79□□□□□ -0.04
Cipc-201ENSMUST00000038369 TonslQ6NZL6 1363 aa14.78□□□□□ -0.04
Cipc-201ENSMUST00000038369 Shroom4Q1W617 1475 aa14.76□□□□□ -0.05
Cipc-201ENSMUST00000038369 Dhx29Q6PGC1 1365 aaKnown RBP14.76□□□□□ -0.05
Cipc-201ENSMUST00000038369 NrkQ9R0G8 1455 aa14.73□□□□□ -0.05
Cipc-201ENSMUST00000038369 Camsap1A2AHC3 1581 aa14.73□□□□□ -0.05
Cipc-201ENSMUST00000038369 Supt5hO55201 1082 aaKnown RBP14.72□□□□□ -0.05
Cipc-201ENSMUST00000038369 Grin2bQ01097 1482 aa14.7□□□□□ -0.06
Cipc-201ENSMUST00000038369 PtprkP35822 1457 aa14.7□□□□□ -0.06
Cipc-201ENSMUST00000038369 Carmil1Q6EDY6 1374 aa14.7□□□□□ -0.06
Cipc-201ENSMUST00000038369 Efcab5A0JP43 1406 aa14.69□□□□□ -0.06
Cipc-201ENSMUST00000038369 Arhgap35Q91YM2 1499 aa14.68□□□□□ -0.06
Cipc-201ENSMUST00000038369 Eid3Q3V124 375 aa14.66□□□□□ -0.06
Cipc-201ENSMUST00000038369 TnnQ80Z71 1560 aa14.65□□□□□ -0.06
Cipc-201ENSMUST00000038369 Duox2A2AQ99 1517 aa14.64□□□□□ -0.07
Cipc-201ENSMUST00000038369 NclP09405 707 aaKnown RBP14.64□□□□□ -0.07
Cipc-201ENSMUST00000038369 PogzQ8BZH4 1409 aaKnown RBP14.63□□□□□ -0.07
Cipc-201ENSMUST00000038369 Mrc2Q64449 1479 aa14.63□□□□□ -0.07
Cipc-201ENSMUST00000038369 Fkbp15Q6P9Q6 1216 aaKnown RBP14.62□□□□□ -0.07
Cipc-201ENSMUST00000038369 Thoc2B1AZI6 1594 aaKnown RBP14.6□□□□□ -0.07
Cipc-201ENSMUST00000038369 Arhgap27A2AB59 869 aa14.6□□□□□ -0.07
Cipc-201ENSMUST00000038369 Aebp1Q640N1 1128 aa14.6□□□□□ -0.07
Cipc-201ENSMUST00000038369 Map3k1P53349 1493 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms