RNA–Protein interactions for RNA: ENSMUST00000031650.3

Cdx2-201, Transcript of Homeobox protein CDX-2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx2, Length 2,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2-201ENSMUST00000031650 NischQ80TM9 1593 aa31.88■■■□□ 2.69
Cdx2-201ENSMUST00000031650 Gm35339A0A140LHH9 1649 aa31.71■■■□□ 2.67
Cdx2-201ENSMUST00000031650 Abcc9P70170 1546 aa30.9■■■□□ 2.54
Cdx2-201ENSMUST00000031650 Abcc8B2RUS7 1588 aa30.5■■■□□ 2.47
Cdx2-201ENSMUST00000031650 ScribQ80U72 1612 aa28.87■■■□□ 2.21
Cdx2-201ENSMUST00000031650 Rhox8Q6VSS7 320 aa28.74■■■□□ 2.19
Cdx2-201ENSMUST00000031650 Dcaf1Q80TR8 1506 aa28.23■■■□□ 2.11
Cdx2-201ENSMUST00000031650 Kdm5dQ62240 1548 aa28.14■■■□□ 2.1
Cdx2-201ENSMUST00000031650 NacadQ5SWP3 1504 aa27.99■■■□□ 2.07
Cdx2-201ENSMUST00000031650 Rb1cc1Q9ESK9 1588 aa27.88■■■□□ 2.05
Cdx2-201ENSMUST00000031650 Baz1aO88379 1555 aa27.51■■□□□ 1.99
Cdx2-201ENSMUST00000031650 Rtl1Q7M732 1744 aa27.48■■□□□ 1.99
Cdx2-201ENSMUST00000031650 Ccdc180J3QNE4 1664 aa27.46■■□□□ 1.99
Cdx2-201ENSMUST00000031650 Sycp2Q9CUU3 1500 aa27.43■■□□□ 1.98
Cdx2-201ENSMUST00000031650 Crybg2B7ZCC2 1516 aa27.12■■□□□ 1.93
Cdx2-201ENSMUST00000031650 Zcchc6Q5BLK4 1491 aaKnown RBP27.06■■□□□ 1.92
Cdx2-201ENSMUST00000031650 BicraF8VPZ9 1578 aa26.95■■□□□ 1.91
Cdx2-201ENSMUST00000031650 Smarca2Q6DIC0 1577 aa26.82■■□□□ 1.88
Cdx2-201ENSMUST00000031650 Ccdc136Q3TVA9 1136 aa26.79■■□□□ 1.88
Cdx2-201ENSMUST00000031650 Cecr2E9Q2Z1 1453 aa26.45■■□□□ 1.82
Cdx2-201ENSMUST00000031650 Trim41Q5NCC3 630 aa26.2■■□□□ 1.78
Cdx2-201ENSMUST00000031650 Brd4Q9ESU6 1400 aaKnown RBP26.11■■□□□ 1.77
Cdx2-201ENSMUST00000031650 Smarca4Q3TKT4 1613 aaKnown RBP26.07■■□□□ 1.76
Cdx2-201ENSMUST00000031650 Synj1Q8CHC4 1574 aa26.03■■□□□ 1.76
Cdx2-201ENSMUST00000031650 CftrP26361 1476 aa25.94■■□□□ 1.74
Cdx2-201ENSMUST00000031650 Pds5bQ4VA53 1446 aaKnown RBP25.87■■□□□ 1.73
Cdx2-201ENSMUST00000031650 Atad2bE9Q166 1460 aaKnown RBP25.86■■□□□ 1.73
Cdx2-201ENSMUST00000031650 Cttnbp2B9EJA2 1648 aa25.83■■□□□ 1.73
Cdx2-201ENSMUST00000031650 Iqgap2Q3UQ44 1575 aa25.81■■□□□ 1.72
Cdx2-201ENSMUST00000031650 HrcG5E8J6 738 aa25.69■■□□□ 1.7
Cdx2-201ENSMUST00000031650 Esf1Q3V1V3 845 aaKnown RBP25.68■■□□□ 1.7
Cdx2-201ENSMUST00000031650 Cngb1E1AZ71 1325 aa25.66■■□□□ 1.7
Cdx2-201ENSMUST00000031650 Golga3P55937 1487 aa25.59■■□□□ 1.69
Cdx2-201ENSMUST00000031650 Top2bQ64511 1612 aa25.43■■□□□ 1.66
Cdx2-201ENSMUST00000031650 Frmpd1A2AKB4 1549 aa25.42■■□□□ 1.66
Cdx2-201ENSMUST00000031650 Wdr62Q3U3T8 1523 aa25.41■■□□□ 1.66
Cdx2-201ENSMUST00000031650 Ercc6F8VPZ5 1481 aa25.39■■□□□ 1.65
Cdx2-201ENSMUST00000031650 Rsf1E9PWW9 1441 aaKnown RBP25.33■■□□□ 1.65
Cdx2-201ENSMUST00000031650 Chic1Q8CBW7 227 aa25.32■■□□□ 1.64
Cdx2-201ENSMUST00000031650 Dnajc5bQ9CQ94 199 aa25.32■■□□□ 1.64
Cdx2-201ENSMUST00000031650 Ccdc88bQ4QRL3 1481 aa25.3■■□□□ 1.64
Cdx2-201ENSMUST00000031650 Thoc2B1AZI6 1594 aaKnown RBP25.3■■□□□ 1.64
Cdx2-201ENSMUST00000031650 Cc2d2aQ8CFW7 1633 aa25.25■■□□□ 1.63
Cdx2-201ENSMUST00000031650 Cep164Q5DU05 1446 aa25.24■■□□□ 1.63
Cdx2-201ENSMUST00000031650 Unc13aQ4KUS2 1712 aa25.16■■□□□ 1.62
Cdx2-201ENSMUST00000031650 Fmn1Q05860 1466 aa25.06■■□□□ 1.6
Cdx2-201ENSMUST00000031650 Phldb1Q6PDH0 1371 aaKnown RBP24.99■■□□□ 1.59
Cdx2-201ENSMUST00000031650 Gab3Q8BSM5 595 aa24.95■■□□□ 1.58
Cdx2-201ENSMUST00000031650 TnnQ80Z71 1560 aa24.91■■□□□ 1.58
Cdx2-201ENSMUST00000031650 Fam135aQ6NS59 1506 aa24.9■■□□□ 1.58
Cdx2-201ENSMUST00000031650 Lamc3Q9R0B6 1581 aa24.9■■□□□ 1.58
Cdx2-201ENSMUST00000031650 Kif15Q6P9L6 1387 aa24.89■■□□□ 1.58
Cdx2-201ENSMUST00000031650 Ubl4bQ9CQ84 188 aa24.83■■□□□ 1.57
Cdx2-201ENSMUST00000031650 Top2aQ01320 1528 aaKnown RBP24.82■■□□□ 1.56
Cdx2-201ENSMUST00000031650 Il27Q8K3I6 234 aa24.69■■□□□ 1.54
Cdx2-201ENSMUST00000031650 Cux2P70298 1426 aa24.64■■□□□ 1.53
Cdx2-201ENSMUST00000031650 Camsap1A2AHC3 1581 aa24.61■■□□□ 1.53
Cdx2-201ENSMUST00000031650 Ccdc18Q640L5 1455 aa24.54■■□□□ 1.52
Cdx2-201ENSMUST00000031650 Rapgef2Q8CHG7 1496 aa24.51■■□□□ 1.51
Cdx2-201ENSMUST00000031650 Ehmt2Q9Z148 1263 aaKnown RBP24.47■■□□□ 1.51
Cdx2-201ENSMUST00000031650 Npm1Q61937 292 aaKnown RBP24.46■■□□□ 1.51
Cdx2-201ENSMUST00000031650 Npm2Q80W85 207 aa24.41■■□□□ 1.5
Cdx2-201ENSMUST00000031650 PtprkP35822 1457 aa24.41■■□□□ 1.5
Cdx2-201ENSMUST00000031650 Mrc2Q64449 1479 aa24.38■■□□□ 1.49
Cdx2-201ENSMUST00000031650 Baz1bQ9Z277 1479 aa24.38■■□□□ 1.49
Cdx2-201ENSMUST00000031650 Rpgrip1Q9EPQ2 1331 aa24.38■■□□□ 1.49
Cdx2-201ENSMUST00000031650 Grin2bQ01097 1482 aa24.38■■□□□ 1.49
Cdx2-201ENSMUST00000031650 Cep162Q6ZQ06 1403 aa24.35■■□□□ 1.49
Cdx2-201ENSMUST00000031650 NrkQ9R0G8 1455 aa24.31■■□□□ 1.48
Cdx2-201ENSMUST00000031650 LrpprcQ6PB66 1392 aaKnown RBP24.3■■□□□ 1.48
Cdx2-201ENSMUST00000031650 Shroom4Q1W617 1475 aa24.29■■□□□ 1.48
Cdx2-201ENSMUST00000031650 Myt1lP97500 1187 aa24.26■■□□□ 1.47
Cdx2-201ENSMUST00000031650 Eif4g1Q6NZJ6 1600 aaKnown RBP24.23■■□□□ 1.47
Cdx2-201ENSMUST00000031650 Kif21aQ9QXL2 1672 aa24.22■■□□□ 1.47
Cdx2-201ENSMUST00000031650 PogzQ8BZH4 1409 aaKnown RBP24.21■■□□□ 1.47
Cdx2-201ENSMUST00000031650 Dhx29Q6PGC1 1365 aaKnown RBP24.18■■□□□ 1.46
Cdx2-201ENSMUST00000031650 Arhgap35Q91YM2 1499 aa24.17■■□□□ 1.46
Cdx2-201ENSMUST00000031650 Duox2A2AQ99 1517 aa24.17■■□□□ 1.46
Cdx2-201ENSMUST00000031650 Efcab5A0JP43 1406 aa24.11■■□□□ 1.45
Cdx2-201ENSMUST00000031650 Zeb1Q64318 1117 aa24.09■■□□□ 1.45
Cdx2-201ENSMUST00000031650 Crocc2F6XLV1 1638 aa24.04■■□□□ 1.44
Cdx2-201ENSMUST00000031650 Mroh2bQ7M6Y6 1581 aa24.03■■□□□ 1.44
Cdx2-201ENSMUST00000031650 Samd9lQ69Z37 1561 aa24.02■■□□□ 1.44
Cdx2-201ENSMUST00000031650 Map3k1P53349 1493 aa23.98■■□□□ 1.43
Cdx2-201ENSMUST00000031650 Plb1Q3TTY0 1478 aa23.92■■□□□ 1.42
Cdx2-201ENSMUST00000031650 Clip1Q922J3 1391 aa23.9■■□□□ 1.42
Cdx2-201ENSMUST00000031650 Rad54l2Q99NG0 1466 aa23.9■■□□□ 1.42
Cdx2-201ENSMUST00000031650 Urb2E9Q7L1 1524 aaKnown RBP23.88■■□□□ 1.41
Cdx2-201ENSMUST00000031650 SynmQ70IV5 1561 aa23.86■■□□□ 1.41
Cdx2-201ENSMUST00000031650 Lrriq1Q0P5X1 1673 aa23.83■■□□□ 1.41
Cdx2-201ENSMUST00000031650 AqrQ8CFQ3 1481 aaKnown RBP23.81■■□□□ 1.4
Cdx2-201ENSMUST00000031650 Carmil1Q6EDY6 1374 aa23.79■■□□□ 1.4
Cdx2-201ENSMUST00000031650 Acin1Q9JIX8 1338 aaKnown RBP23.76■■□□□ 1.39
Cdx2-201ENSMUST00000031650 Eea1Q8BL66 1411 aa23.74■■□□□ 1.39
Cdx2-201ENSMUST00000031650 Disp1Q3TDN0 1521 aa23.73■■□□□ 1.39
Cdx2-201ENSMUST00000031650 Setd5Q5XJV7 1441 aa23.73■■□□□ 1.39
Cdx2-201ENSMUST00000031650 Magi3Q9EQJ9 1476 aa23.71■■□□□ 1.39
Cdx2-201ENSMUST00000031650 Ap3b1Q9Z1T1 1105 aa23.71■■□□□ 1.39
Cdx2-201ENSMUST00000031650 Arap1Q4LDD4 1452 aa23.7■■□□□ 1.38
Cdx2-201ENSMUST00000031650 Ankrd26Q811D2 1581 aa23.7■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms