RNA–Protein interactions for RNA: ENSMUST00000026252.13

Ldb1-201, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-201ENSMUST00000026252 NischQ80TM9 1593 aa38.94■■■■□ 3.82
Ldb1-201ENSMUST00000026252 Gm35339A0A140LHH9 1649 aa38.82■■■■□ 3.81
Ldb1-201ENSMUST00000026252 Abcc9P70170 1546 aa37.83■■■■□ 3.65
Ldb1-201ENSMUST00000026252 Abcc8B2RUS7 1588 aa37.21■■■■□ 3.55
Ldb1-201ENSMUST00000026252 Rhox8Q6VSS7 320 aa35.08■■■■□ 3.21
Ldb1-201ENSMUST00000026252 ScribQ80U72 1612 aa35.06■■■■□ 3.2
Ldb1-201ENSMUST00000026252 Dcaf1Q80TR8 1506 aa34.68■■■■□ 3.14
Ldb1-201ENSMUST00000026252 Kdm5dQ62240 1548 aa34.25■■■■□ 3.07
Ldb1-201ENSMUST00000026252 Rtl1Q7M732 1744 aa34.22■■■■□ 3.07
Ldb1-201ENSMUST00000026252 NacadQ5SWP3 1504 aa34.15■■■■□ 3.06
Ldb1-201ENSMUST00000026252 Rb1cc1Q9ESK9 1588 aa34.08■■■■□ 3.05
Ldb1-201ENSMUST00000026252 Ccdc180J3QNE4 1664 aa33.86■■■■□ 3.01
Ldb1-201ENSMUST00000026252 Baz1aO88379 1555 aa33.69■■■□□ 2.98
Ldb1-201ENSMUST00000026252 Sycp2Q9CUU3 1500 aa33.41■■■□□ 2.94
Ldb1-201ENSMUST00000026252 Crybg2B7ZCC2 1516 aa33.28■■■□□ 2.92
Ldb1-201ENSMUST00000026252 Zcchc6Q5BLK4 1491 aaKnown RBP33.03■■■□□ 2.88
Ldb1-201ENSMUST00000026252 Smarca2Q6DIC0 1577 aa32.84■■■□□ 2.85
Ldb1-201ENSMUST00000026252 BicraF8VPZ9 1578 aa32.71■■■□□ 2.83
Ldb1-201ENSMUST00000026252 Ccdc136Q3TVA9 1136 aa32.57■■■□□ 2.8
Ldb1-201ENSMUST00000026252 Trim41Q5NCC3 630 aa32.14■■■□□ 2.74
Ldb1-201ENSMUST00000026252 Cecr2E9Q2Z1 1453 aa32.13■■■□□ 2.73
Ldb1-201ENSMUST00000026252 Brd4Q9ESU6 1400 aaKnown RBP32.01■■■□□ 2.71
Ldb1-201ENSMUST00000026252 Smarca4Q3TKT4 1613 aaKnown RBP31.83■■■□□ 2.69
Ldb1-201ENSMUST00000026252 Synj1Q8CHC4 1574 aa31.78■■■□□ 2.68
Ldb1-201ENSMUST00000026252 HrcG5E8J6 738 aa31.76■■■□□ 2.67
Ldb1-201ENSMUST00000026252 CftrP26361 1476 aa31.66■■■□□ 2.66
Ldb1-201ENSMUST00000026252 Cttnbp2B9EJA2 1648 aa31.64■■■□□ 2.66
Ldb1-201ENSMUST00000026252 Pds5bQ4VA53 1446 aaKnown RBP31.52■■■□□ 2.64
Ldb1-201ENSMUST00000026252 Atad2bE9Q166 1460 aaKnown RBP31.5■■■□□ 2.63
Ldb1-201ENSMUST00000026252 Iqgap2Q3UQ44 1575 aa31.46■■■□□ 2.63
Ldb1-201ENSMUST00000026252 Golga3P55937 1487 aa31.39■■■□□ 2.62
Ldb1-201ENSMUST00000026252 Cngb1E1AZ71 1325 aa31.29■■■□□ 2.6
Ldb1-201ENSMUST00000026252 Esf1Q3V1V3 845 aaKnown RBP31.27■■■□□ 2.6
Ldb1-201ENSMUST00000026252 Top2bQ64511 1612 aa31.18■■■□□ 2.58
Ldb1-201ENSMUST00000026252 Cep164Q5DU05 1446 aa31.12■■■□□ 2.57
Ldb1-201ENSMUST00000026252 Rsf1E9PWW9 1441 aaKnown RBP30.98■■■□□ 2.55
Ldb1-201ENSMUST00000026252 Wdr62Q3U3T8 1523 aa30.95■■■□□ 2.54
Ldb1-201ENSMUST00000026252 Ercc6F8VPZ5 1481 aa30.94■■■□□ 2.54
Ldb1-201ENSMUST00000026252 Frmpd1A2AKB4 1549 aa30.89■■■□□ 2.54
Ldb1-201ENSMUST00000026252 Ccdc88bQ4QRL3 1481 aa30.89■■■□□ 2.54
Ldb1-201ENSMUST00000026252 Cc2d2aQ8CFW7 1633 aa30.86■■■□□ 2.53
Ldb1-201ENSMUST00000026252 Chic1Q8CBW7 227 aa30.84■■■□□ 2.53
Ldb1-201ENSMUST00000026252 Fmn1Q05860 1466 aa30.75■■■□□ 2.51
Ldb1-201ENSMUST00000026252 Thoc2B1AZI6 1594 aaKnown RBP30.72■■■□□ 2.51
Ldb1-201ENSMUST00000026252 Unc13aQ4KUS2 1712 aa30.59■■■□□ 2.49
Ldb1-201ENSMUST00000026252 TnnQ80Z71 1560 aa30.52■■■□□ 2.48
Ldb1-201ENSMUST00000026252 Top2aQ01320 1528 aaKnown RBP30.45■■■□□ 2.46
Ldb1-201ENSMUST00000026252 Lamc3Q9R0B6 1581 aa30.44■■■□□ 2.46
Ldb1-201ENSMUST00000026252 Gab3Q8BSM5 595 aa30.41■■■□□ 2.46
Ldb1-201ENSMUST00000026252 Phldb1Q6PDH0 1371 aaKnown RBP30.4■■■□□ 2.46
Ldb1-201ENSMUST00000026252 Fam135aQ6NS59 1506 aa30.32■■■□□ 2.44
Ldb1-201ENSMUST00000026252 Kif15Q6P9L6 1387 aa30.29■■■□□ 2.44
Ldb1-201ENSMUST00000026252 Rapgef2Q8CHG7 1496 aa30.12■■■□□ 2.41
Ldb1-201ENSMUST00000026252 Ubl4bQ9CQ84 188 aa30.07■■■□□ 2.4
Ldb1-201ENSMUST00000026252 Camsap1A2AHC3 1581 aa30.07■■■□□ 2.4
Ldb1-201ENSMUST00000026252 Ccdc18Q640L5 1455 aa30■■■□□ 2.39
Ldb1-201ENSMUST00000026252 Baz1bQ9Z277 1479 aa29.95■■■□□ 2.38
Ldb1-201ENSMUST00000026252 Cux2P70298 1426 aa29.94■■■□□ 2.38
Ldb1-201ENSMUST00000026252 Ehmt2Q9Z148 1263 aaKnown RBP29.91■■■□□ 2.38
Ldb1-201ENSMUST00000026252 Il27Q8K3I6 234 aa29.89■■■□□ 2.38
Ldb1-201ENSMUST00000026252 Dnajc5bQ9CQ94 199 aa29.89■■■□□ 2.38
Ldb1-201ENSMUST00000026252 Cep162Q6ZQ06 1403 aa29.86■■■□□ 2.37
Ldb1-201ENSMUST00000026252 Npm2Q80W85 207 aa29.82■■■□□ 2.36
Ldb1-201ENSMUST00000026252 NrkQ9R0G8 1455 aa29.8■■■□□ 2.36
Ldb1-201ENSMUST00000026252 Grin2bQ01097 1482 aa29.77■■■□□ 2.36
Ldb1-201ENSMUST00000026252 Eif4g1Q6NZJ6 1600 aaKnown RBP29.77■■■□□ 2.36
Ldb1-201ENSMUST00000026252 Npm1Q61937 292 aaKnown RBP29.75■■■□□ 2.35
Ldb1-201ENSMUST00000026252 Shroom4Q1W617 1475 aa29.75■■■□□ 2.35
Ldb1-201ENSMUST00000026252 PtprkP35822 1457 aa29.71■■■□□ 2.35
Ldb1-201ENSMUST00000026252 Mrc2Q64449 1479 aa29.63■■■□□ 2.33
Ldb1-201ENSMUST00000026252 Rpgrip1Q9EPQ2 1331 aa29.62■■■□□ 2.33
Ldb1-201ENSMUST00000026252 Acin1Q9JIX8 1338 aaKnown RBP29.59■■■□□ 2.33
Ldb1-201ENSMUST00000026252 LrpprcQ6PB66 1392 aaKnown RBP29.59■■■□□ 2.33
Ldb1-201ENSMUST00000026252 Arhgap35Q91YM2 1499 aa29.58■■■□□ 2.33
Ldb1-201ENSMUST00000026252 Myt1lP97500 1187 aa29.57■■■□□ 2.32
Ldb1-201ENSMUST00000026252 PogzQ8BZH4 1409 aaKnown RBP29.53■■■□□ 2.32
Ldb1-201ENSMUST00000026252 Map3k1P53349 1493 aa29.5■■■□□ 2.31
Ldb1-201ENSMUST00000026252 Efcab5A0JP43 1406 aa29.48■■■□□ 2.31
Ldb1-201ENSMUST00000026252 Duox2A2AQ99 1517 aa29.44■■■□□ 2.3
Ldb1-201ENSMUST00000026252 Kif21aQ9QXL2 1672 aa29.43■■■□□ 2.3
Ldb1-201ENSMUST00000026252 Dhx29Q6PGC1 1365 aaKnown RBP29.4■■■□□ 2.3
Ldb1-201ENSMUST00000026252 Mroh2bQ7M6Y6 1581 aa29.4■■■□□ 2.3
Ldb1-201ENSMUST00000026252 Zeb1Q64318 1117 aa29.34■■■□□ 2.29
Ldb1-201ENSMUST00000026252 Crocc2F6XLV1 1638 aa29.32■■■□□ 2.28
Ldb1-201ENSMUST00000026252 AqrQ8CFQ3 1481 aaKnown RBP29.29■■■□□ 2.28
Ldb1-201ENSMUST00000026252 Clip1Q922J3 1391 aa29.28■■■□□ 2.28
Ldb1-201ENSMUST00000026252 Samd9lQ69Z37 1561 aa29.25■■■□□ 2.27
Ldb1-201ENSMUST00000026252 SynmQ70IV5 1561 aa29.18■■■□□ 2.26
Ldb1-201ENSMUST00000026252 Eea1Q8BL66 1411 aa29.16■■■□□ 2.26
Ldb1-201ENSMUST00000026252 Carmil1Q6EDY6 1374 aa29.14■■■□□ 2.25
Ldb1-201ENSMUST00000026252 Erich3F6QRE9 1637 aa29.05■■■□□ 2.24
Ldb1-201ENSMUST00000026252 Setd5Q5XJV7 1441 aa29.05■■■□□ 2.24
Ldb1-201ENSMUST00000026252 Ankrd26Q811D2 1581 aa29.04■■■□□ 2.24
Ldb1-201ENSMUST00000026252 Plb1Q3TTY0 1478 aa29.03■■■□□ 2.24
Ldb1-201ENSMUST00000026252 Arap1Q4LDD4 1452 aa29.03■■■□□ 2.24
Ldb1-201ENSMUST00000026252 Rad54l2Q99NG0 1466 aa29.03■■■□□ 2.24
Ldb1-201ENSMUST00000026252 Urb2E9Q7L1 1524 aaKnown RBP28.99■■■□□ 2.23
Ldb1-201ENSMUST00000026252 Arhgef5E9Q7D5 1581 aa28.97■■■□□ 2.23
Ldb1-201ENSMUST00000026252 Polr1aO35134 1717 aaKnown RBP28.96■■■□□ 2.23
Ldb1-201ENSMUST00000026252 Cux1P53564 1515 aa28.92■■■□□ 2.22
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms