RNA–Protein interactions for RNA: ENSMUST00000025254.8

Lims2-201, Transcript of LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lims2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2-201ENSMUST00000025254 NischQ80TM9 1593 aa28.44■■■□□ 2.14
Lims2-201ENSMUST00000025254 Gm35339A0A140LHH9 1649 aa28.13■■■□□ 2.09
Lims2-201ENSMUST00000025254 Abcc9P70170 1546 aa27.67■■■□□ 2.02
Lims2-201ENSMUST00000025254 Abcc8B2RUS7 1588 aa27.07■■□□□ 1.92
Lims2-201ENSMUST00000025254 Rhox8Q6VSS7 320 aa26.03■■□□□ 1.76
Lims2-201ENSMUST00000025254 Rtl1Q7M732 1744 aa25.86■■□□□ 1.73
Lims2-201ENSMUST00000025254 Dcaf1Q80TR8 1506 aa25.38■■□□□ 1.65
Lims2-201ENSMUST00000025254 Ccdc180J3QNE4 1664 aa25.31■■□□□ 1.64
Lims2-201ENSMUST00000025254 ScribQ80U72 1612 aa25.23■■□□□ 1.63
Lims2-201ENSMUST00000025254 Rb1cc1Q9ESK9 1588 aa24.9■■□□□ 1.58
Lims2-201ENSMUST00000025254 Zcchc6Q5BLK4 1491 aaKnown RBP24.88■■□□□ 1.57
Lims2-201ENSMUST00000025254 Kdm5dQ62240 1548 aa24.76■■□□□ 1.56
Lims2-201ENSMUST00000025254 Baz1aO88379 1555 aa24.66■■□□□ 1.54
Lims2-201ENSMUST00000025254 NacadQ5SWP3 1504 aa24.66■■□□□ 1.54
Lims2-201ENSMUST00000025254 Crybg2B7ZCC2 1516 aa24.36■■□□□ 1.49
Lims2-201ENSMUST00000025254 HrcG5E8J6 738 aa24.14■■□□□ 1.45
Lims2-201ENSMUST00000025254 Ccdc136Q3TVA9 1136 aa24.11■■□□□ 1.45
Lims2-201ENSMUST00000025254 Sycp2Q9CUU3 1500 aa24.1■■□□□ 1.45
Lims2-201ENSMUST00000025254 Smarca2Q6DIC0 1577 aa24.09■■□□□ 1.45
Lims2-201ENSMUST00000025254 Trim41Q5NCC3 630 aa23.83■■□□□ 1.41
Lims2-201ENSMUST00000025254 Rpgrip1Q9EPQ2 1331 aa23.63■■□□□ 1.37
Lims2-201ENSMUST00000025254 Brd4Q9ESU6 1400 aaKnown RBP23.53■■□□□ 1.36
Lims2-201ENSMUST00000025254 BicraF8VPZ9 1578 aa23.51■■□□□ 1.35
Lims2-201ENSMUST00000025254 Cep164Q5DU05 1446 aa23.45■■□□□ 1.35
Lims2-201ENSMUST00000025254 Cecr2E9Q2Z1 1453 aa23.42■■□□□ 1.34
Lims2-201ENSMUST00000025254 Acin1Q9JIX8 1338 aaKnown RBP23.26■■□□□ 1.31
Lims2-201ENSMUST00000025254 Synj1Q8CHC4 1574 aa23.25■■□□□ 1.31
Lims2-201ENSMUST00000025254 Golga3P55937 1487 aa23.22■■□□□ 1.31
Lims2-201ENSMUST00000025254 CftrP26361 1476 aa23.17■■□□□ 1.3
Lims2-201ENSMUST00000025254 Cngb1E1AZ71 1325 aa23.11■■□□□ 1.29
Lims2-201ENSMUST00000025254 Rsf1E9PWW9 1441 aaKnown RBP23.11■■□□□ 1.29
Lims2-201ENSMUST00000025254 Cttnbp2B9EJA2 1648 aa23.08■■□□□ 1.28
Lims2-201ENSMUST00000025254 Smarca4Q3TKT4 1613 aaKnown RBP23.03■■□□□ 1.28
Lims2-201ENSMUST00000025254 Chic1Q8CBW7 227 aa22.98■■□□□ 1.27
Lims2-201ENSMUST00000025254 Ehmt2Q9Z148 1263 aaKnown RBP22.97■■□□□ 1.27
Lims2-201ENSMUST00000025254 Top2bQ64511 1612 aa22.97■■□□□ 1.27
Lims2-201ENSMUST00000025254 Ccdc88bQ4QRL3 1481 aa22.96■■□□□ 1.27
Lims2-201ENSMUST00000025254 Esf1Q3V1V3 845 aaKnown RBP22.88■■□□□ 1.25
Lims2-201ENSMUST00000025254 Iqgap2Q3UQ44 1575 aa22.71■■□□□ 1.23
Lims2-201ENSMUST00000025254 Gab3Q8BSM5 595 aa22.69■■□□□ 1.22
Lims2-201ENSMUST00000025254 Atad2bE9Q166 1460 aaKnown RBP22.67■■□□□ 1.22
Lims2-201ENSMUST00000025254 Fmn1Q05860 1466 aa22.65■■□□□ 1.22
Lims2-201ENSMUST00000025254 Cc2d2aQ8CFW7 1633 aa22.63■■□□□ 1.21
Lims2-201ENSMUST00000025254 Pds5bQ4VA53 1446 aaKnown RBP22.58■■□□□ 1.21
Lims2-201ENSMUST00000025254 Top2aQ01320 1528 aaKnown RBP22.51■■□□□ 1.19
Lims2-201ENSMUST00000025254 Rapgef2Q8CHG7 1496 aa22.46■■□□□ 1.19
Lims2-201ENSMUST00000025254 TnnQ80Z71 1560 aa22.32■■□□□ 1.16
Lims2-201ENSMUST00000025254 Wdr62Q3U3T8 1523 aa22.29■■□□□ 1.16
Lims2-201ENSMUST00000025254 Frmpd1A2AKB4 1549 aa22.26■■□□□ 1.15
Lims2-201ENSMUST00000025254 Cep162Q6ZQ06 1403 aa22.24■■□□□ 1.15
Lims2-201ENSMUST00000025254 Ercc6F8VPZ5 1481 aa22.15■■□□□ 1.14
Lims2-201ENSMUST00000025254 Lamc3Q9R0B6 1581 aa22.15■■□□□ 1.14
Lims2-201ENSMUST00000025254 Eif4g1Q6NZJ6 1600 aaKnown RBP22.11■■□□□ 1.13
Lims2-201ENSMUST00000025254 NefmP08553 848 aa22.11■■□□□ 1.13
Lims2-201ENSMUST00000025254 Mier1Q5UAK0 511 aa22.06■■□□□ 1.12
Lims2-201ENSMUST00000025254 Pcgf6Q99NA9 353 aa22.05■■□□□ 1.12
Lims2-201ENSMUST00000025254 Npm2Q80W85 207 aa22.03■■□□□ 1.12
Lims2-201ENSMUST00000025254 NrkQ9R0G8 1455 aa21.97■■□□□ 1.11
Lims2-201ENSMUST00000025254 Kif15Q6P9L6 1387 aa21.96■■□□□ 1.11
Lims2-201ENSMUST00000025254 Myt1lP97500 1187 aa21.94■■□□□ 1.1
Lims2-201ENSMUST00000025254 Unc13aQ4KUS2 1712 aa21.94■■□□□ 1.1
Lims2-201ENSMUST00000025254 Camsap1A2AHC3 1581 aa21.91■■□□□ 1.1
Lims2-201ENSMUST00000025254 Arhgap35Q91YM2 1499 aa21.9■■□□□ 1.1
Lims2-201ENSMUST00000025254 Shroom4Q1W617 1475 aa21.87■■□□□ 1.09
Lims2-201ENSMUST00000025254 Clip1Q922J3 1391 aa21.85■■□□□ 1.09
Lims2-201ENSMUST00000025254 PtprkP35822 1457 aa21.85■■□□□ 1.09
Lims2-201ENSMUST00000025254 Ccdc18Q640L5 1455 aa21.84■■□□□ 1.09
Lims2-201ENSMUST00000025254 Map3k1P53349 1493 aa21.82■■□□□ 1.08
Lims2-201ENSMUST00000025254 Phldb1Q6PDH0 1371 aaKnown RBP21.82■■□□□ 1.08
Lims2-201ENSMUST00000025254 UbtfP25976 765 aaKnown RBP21.81■■□□□ 1.08
Lims2-201ENSMUST00000025254 Thoc2B1AZI6 1594 aaKnown RBP21.81■■□□□ 1.08
Lims2-201ENSMUST00000025254 Grin2bQ01097 1482 aa21.77■■□□□ 1.07
Lims2-201ENSMUST00000025254 Supt5hO55201 1082 aaKnown RBP21.75■■□□□ 1.07
Lims2-201ENSMUST00000025254 Il27Q8K3I6 234 aa21.72■■□□□ 1.07
Lims2-201ENSMUST00000025254 Eea1Q8BL66 1411 aa21.71■■□□□ 1.07
Lims2-201ENSMUST00000025254 Mroh2bQ7M6Y6 1581 aa21.64■■□□□ 1.05
Lims2-201ENSMUST00000025254 Zeb1Q64318 1117 aa21.64■■□□□ 1.05
Lims2-201ENSMUST00000025254 Fam135aQ6NS59 1506 aa21.63■■□□□ 1.05
Lims2-201ENSMUST00000025254 Arap1Q4LDD4 1452 aa21.63■■□□□ 1.05
Lims2-201ENSMUST00000025254 Cux2P70298 1426 aa21.62■■□□□ 1.05
Lims2-201ENSMUST00000025254 AqrQ8CFQ3 1481 aaKnown RBP21.61■■□□□ 1.05
Lims2-201ENSMUST00000025254 Arhgef5E9Q7D5 1581 aa21.6■■□□□ 1.05
Lims2-201ENSMUST00000025254 Setd5Q5XJV7 1441 aa21.57■■□□□ 1.04
Lims2-201ENSMUST00000025254 Plekhg3Q4VAC9 1341 aa21.57■■□□□ 1.04
Lims2-201ENSMUST00000025254 Ncapd3Q6ZQK0 1506 aa21.57■■□□□ 1.04
Lims2-201ENSMUST00000025254 Efcab5A0JP43 1406 aa21.56■■□□□ 1.04
Lims2-201ENSMUST00000025254 Ubl4bQ9CQ84 188 aa21.55■■□□□ 1.04
Lims2-201ENSMUST00000025254 Baz1bQ9Z277 1479 aa21.54■■□□□ 1.04
Lims2-201ENSMUST00000025254 Erich3F6QRE9 1637 aa21.51■■□□□ 1.03
Lims2-201ENSMUST00000025254 Npm1Q61937 292 aaKnown RBP21.51■■□□□ 1.03
Lims2-201ENSMUST00000025254 LrpprcQ6PB66 1392 aaKnown RBP21.5■■□□□ 1.03
Lims2-201ENSMUST00000025254 PogzQ8BZH4 1409 aaKnown RBP21.48■■□□□ 1.03
Lims2-201ENSMUST00000025254 Tiam1Q60610 1591 aa21.47■■□□□ 1.03
Lims2-201ENSMUST00000025254 Las1lA2BE28 776 aaKnown RBP21.46■■□□□ 1.03
Lims2-201ENSMUST00000025254 Ankrd26Q811D2 1581 aa21.46■■□□□ 1.03
Lims2-201ENSMUST00000025254 Carmil1Q6EDY6 1374 aa21.43■■□□□ 1.02
Lims2-201ENSMUST00000025254 Duox2A2AQ99 1517 aa21.42■■□□□ 1.02
Lims2-201ENSMUST00000025254 Naip1Q9QWK5 1403 aa21.37■■□□□ 1.01
Lims2-201ENSMUST00000025254 Sall2Q9QX96 1004 aa21.35■■□□□ 1.01
Lims2-201ENSMUST00000025254 Pcf11G3X9Z4 1553 aa21.34■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms