RNA–Protein interactions for RNA: ENSMUST00000022744.3

Gdnf-201, Transcript of Glial cell line-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gdnf, Length 3,509 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gdnf-201ENSMUST00000022744 NischQ80TM9 1593 aa18.5■□□□□ 0.55
Gdnf-201ENSMUST00000022744 Gm35339A0A140LHH9 1649 aa17.85■□□□□ 0.45
Gdnf-201ENSMUST00000022744 Abcc9P70170 1546 aa17.74■□□□□ 0.43
Gdnf-201ENSMUST00000022744 Abcc8B2RUS7 1588 aa17.57■□□□□ 0.4
Gdnf-201ENSMUST00000022744 Rhox8Q6VSS7 320 aa17.55■□□□□ 0.4
Gdnf-201ENSMUST00000022744 ScribQ80U72 1612 aa16.7■□□□□ 0.26
Gdnf-201ENSMUST00000022744 Ccdc136Q3TVA9 1136 aa16.39■□□□□ 0.21
Gdnf-201ENSMUST00000022744 Kdm5dQ62240 1548 aa16.35■□□□□ 0.21
Gdnf-201ENSMUST00000022744 Rb1cc1Q9ESK9 1588 aa16.21■□□□□ 0.18
Gdnf-201ENSMUST00000022744 NacadQ5SWP3 1504 aa16.11■□□□□ 0.17
Gdnf-201ENSMUST00000022744 Zcchc6Q5BLK4 1491 aaKnown RBP16.09■□□□□ 0.17
Gdnf-201ENSMUST00000022744 Dcaf1Q80TR8 1506 aa15.86■□□□□ 0.13
Gdnf-201ENSMUST00000022744 Baz1aO88379 1555 aa15.83■□□□□ 0.12
Gdnf-201ENSMUST00000022744 Sycp2Q9CUU3 1500 aa15.8■□□□□ 0.12
Gdnf-201ENSMUST00000022744 Cngb1E1AZ71 1325 aa15.65■□□□□ 0.1
Gdnf-201ENSMUST00000022744 BicraF8VPZ9 1578 aa15.6■□□□□ 0.09
Gdnf-201ENSMUST00000022744 Esf1Q3V1V3 845 aaKnown RBP15.59■□□□□ 0.09
Gdnf-201ENSMUST00000022744 Rtl1Q7M732 1744 aa15.58■□□□□ 0.08
Gdnf-201ENSMUST00000022744 Cecr2E9Q2Z1 1453 aa15.57■□□□□ 0.08
Gdnf-201ENSMUST00000022744 Trim41Q5NCC3 630 aa15.48■□□□□ 0.07
Gdnf-201ENSMUST00000022744 Ehmt2Q9Z148 1263 aaKnown RBP15.44■□□□□ 0.06
Gdnf-201ENSMUST00000022744 Smarca2Q6DIC0 1577 aa15.4■□□□□ 0.06
Gdnf-201ENSMUST00000022744 Gab3Q8BSM5 595 aa15.39■□□□□ 0.05
Gdnf-201ENSMUST00000022744 Ccdc180J3QNE4 1664 aa15.38■□□□□ 0.05
Gdnf-201ENSMUST00000022744 Crybg2B7ZCC2 1516 aa15.25■□□□□ 0.03
Gdnf-201ENSMUST00000022744 Chic1Q8CBW7 227 aa15.23■□□□□ 0.03
Gdnf-201ENSMUST00000022744 Synj1Q8CHC4 1574 aa15.19■□□□□ 0.02
Gdnf-201ENSMUST00000022744 Il27Q8K3I6 234 aa15.18■□□□□ 0.02
Gdnf-201ENSMUST00000022744 Brd4Q9ESU6 1400 aaKnown RBP15.15■□□□□ 0.02
Gdnf-201ENSMUST00000022744 Dnajc5bQ9CQ94 199 aa15.13■□□□□ 0.01
Gdnf-201ENSMUST00000022744 CftrP26361 1476 aa15.07■□□□□ 0
Gdnf-201ENSMUST00000022744 Smarca4Q3TKT4 1613 aaKnown RBP15.04■□□□□ -0
Gdnf-201ENSMUST00000022744 Iqgap2Q3UQ44 1575 aa14.98□□□□□ -0.01
Gdnf-201ENSMUST00000022744 Ccdc88bQ4QRL3 1481 aa14.98□□□□□ -0.01
Gdnf-201ENSMUST00000022744 Rsf1E9PWW9 1441 aaKnown RBP14.97□□□□□ -0.01
Gdnf-201ENSMUST00000022744 Pds5bQ4VA53 1446 aaKnown RBP14.94□□□□□ -0.02
Gdnf-201ENSMUST00000022744 Myt1lP97500 1187 aa14.93□□□□□ -0.02
Gdnf-201ENSMUST00000022744 Atad2bE9Q166 1460 aaKnown RBP14.93□□□□□ -0.02
Gdnf-201ENSMUST00000022744 HrcG5E8J6 738 aa14.9□□□□□ -0.02
Gdnf-201ENSMUST00000022744 Golga3P55937 1487 aa14.89□□□□□ -0.03
Gdnf-201ENSMUST00000022744 Ubl4bQ9CQ84 188 aa14.86□□□□□ -0.03
Gdnf-201ENSMUST00000022744 Cttnbp2B9EJA2 1648 aa14.85□□□□□ -0.03
Gdnf-201ENSMUST00000022744 Npm2Q80W85 207 aa14.83□□□□□ -0.04
Gdnf-201ENSMUST00000022744 Ercc6F8VPZ5 1481 aa14.8□□□□□ -0.04
Gdnf-201ENSMUST00000022744 Frmpd1A2AKB4 1549 aa14.79□□□□□ -0.04
Gdnf-201ENSMUST00000022744 Cc2d2aQ8CFW7 1633 aa14.79□□□□□ -0.04
Gdnf-201ENSMUST00000022744 Zeb1Q64318 1117 aa14.76□□□□□ -0.05
Gdnf-201ENSMUST00000022744 Kif15Q6P9L6 1387 aa14.76□□□□□ -0.05
Gdnf-201ENSMUST00000022744 Cep164Q5DU05 1446 aa14.68□□□□□ -0.06
Gdnf-201ENSMUST00000022744 Wdr62Q3U3T8 1523 aa14.66□□□□□ -0.06
Gdnf-201ENSMUST00000022744 Ap3b1Q9Z1T1 1105 aa14.63□□□□□ -0.07
Gdnf-201ENSMUST00000022744 Npm1Q61937 292 aaKnown RBP14.62□□□□□ -0.07
Gdnf-201ENSMUST00000022744 Top2bQ64511 1612 aa14.57□□□□□ -0.08
Gdnf-201ENSMUST00000022744 Phldb1Q6PDH0 1371 aaKnown RBP14.53□□□□□ -0.08
Gdnf-201ENSMUST00000022744 Cux2P70298 1426 aa14.53□□□□□ -0.08
Gdnf-201ENSMUST00000022744 Unc13aQ4KUS2 1712 aa14.52□□□□□ -0.09
Gdnf-201ENSMUST00000022744 Thoc2B1AZI6 1594 aaKnown RBP14.51□□□□□ -0.09
Gdnf-201ENSMUST00000022744 Fmn1Q05860 1466 aa14.49□□□□□ -0.09
Gdnf-201ENSMUST00000022744 UbtfP25976 765 aaKnown RBP14.44□□□□□ -0.1
Gdnf-201ENSMUST00000022744 Plekhg3Q4VAC9 1341 aa14.42□□□□□ -0.1
Gdnf-201ENSMUST00000022744 Rapgef2Q8CHG7 1496 aa14.42□□□□□ -0.1
Gdnf-201ENSMUST00000022744 PtprkP35822 1457 aa14.41□□□□□ -0.1
Gdnf-201ENSMUST00000022744 Ccdc18Q640L5 1455 aa14.33□□□□□ -0.12
Gdnf-201ENSMUST00000022744 Top2aQ01320 1528 aaKnown RBP14.33□□□□□ -0.12
Gdnf-201ENSMUST00000022744 Lmod2Q3UHZ5 550 aa14.31□□□□□ -0.12
Gdnf-201ENSMUST00000022744 Lamc3Q9R0B6 1581 aa14.28□□□□□ -0.12
Gdnf-201ENSMUST00000022744 Camsap1A2AHC3 1581 aa14.26□□□□□ -0.13
Gdnf-201ENSMUST00000022744 Cep162Q6ZQ06 1403 aa14.26□□□□□ -0.13
Gdnf-201ENSMUST00000022744 Dhx29Q6PGC1 1365 aaKnown RBP14.25□□□□□ -0.13
Gdnf-201ENSMUST00000022744 Fam135aQ6NS59 1506 aa14.25□□□□□ -0.13
Gdnf-201ENSMUST00000022744 LrpprcQ6PB66 1392 aaKnown RBP14.23□□□□□ -0.13
Gdnf-201ENSMUST00000022744 Rad54l2Q99NG0 1466 aa14.21□□□□□ -0.13
Gdnf-201ENSMUST00000022744 Baz1bQ9Z277 1479 aa14.2□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Mrc2Q64449 1479 aa14.2□□□□□ -0.14
Gdnf-201ENSMUST00000022744 TnnQ80Z71 1560 aa14.19□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Fkbp15Q6P9Q6 1216 aaKnown RBP14.18□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Clip1Q922J3 1391 aa14.17□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Grin2bQ01097 1482 aa14.16□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Kif21aQ9QXL2 1672 aa14.15□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Duox2A2AQ99 1517 aa14.15□□□□□ -0.14
Gdnf-201ENSMUST00000022744 Ifnlr1Q8CGK5 535 aa14.13□□□□□ -0.15
Gdnf-201ENSMUST00000022744 Arhgap35Q91YM2 1499 aa14.11□□□□□ -0.15
Gdnf-201ENSMUST00000022744 Plb1Q3TTY0 1478 aa14.1□□□□□ -0.15
Gdnf-201ENSMUST00000022744 Mier1Q5UAK0 511 aa14.1□□□□□ -0.15
Gdnf-201ENSMUST00000022744 Shroom4Q1W617 1475 aa14.09□□□□□ -0.15
Gdnf-201ENSMUST00000022744 Setd5Q5XJV7 1441 aa14.08□□□□□ -0.16
Gdnf-201ENSMUST00000022744 PogzQ8BZH4 1409 aaKnown RBP14.08□□□□□ -0.16
Gdnf-201ENSMUST00000022744 Acin1Q9JIX8 1338 aaKnown RBP14.08□□□□□ -0.16
Gdnf-201ENSMUST00000022744 Urb2E9Q7L1 1524 aaKnown RBP14.07□□□□□ -0.16
Gdnf-201ENSMUST00000022744 Samd9lQ69Z37 1561 aa14.04□□□□□ -0.16
Gdnf-201ENSMUST00000022744 Arhgap27A2AB59 869 aa14.02□□□□□ -0.17
Gdnf-201ENSMUST00000022744 Fam50aQ9WV03 339 aaKnown RBP14□□□□□ -0.17
Gdnf-201ENSMUST00000022744 Crocc2F6XLV1 1638 aa13.99□□□□□ -0.17
Gdnf-201ENSMUST00000022744 Pelp1Q9DBD5 1123 aaKnown RBP13.98□□□□□ -0.17
Gdnf-201ENSMUST00000022744 NrkQ9R0G8 1455 aa13.97□□□□□ -0.17
Gdnf-201ENSMUST00000022744 Ppargc1bQ8VHJ7 1014 aa13.97□□□□□ -0.17
Gdnf-201ENSMUST00000022744 Eid3Q3V124 375 aa13.95□□□□□ -0.18
Gdnf-201ENSMUST00000022744 Rpap1Q80TE0 1409 aa13.95□□□□□ -0.18
Gdnf-201ENSMUST00000022744 Mroh2bQ7M6Y6 1581 aa13.94□□□□□ -0.18
Gdnf-201ENSMUST00000022744 BlmO88700 1416 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms